RNA–Protein interactions for RNA: ENST00000440072.5

TRO-212, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-212ENST00000440072 NISCHQ9Y2I1 1504 aa31.13■■■□□ 2.57
TRO-212ENST00000440072 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.03
TRO-212ENST00000440072 ABCC9O60706 1549 aa27.16■■□□□ 1.94
TRO-212ENST00000440072 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
TRO-212ENST00000440072 NACADO15069 1562 aa26■■□□□ 1.75
TRO-212ENST00000440072 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
TRO-212ENST00000440072 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
TRO-212ENST00000440072 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
TRO-212ENST00000440072 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
TRO-212ENST00000440072 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
TRO-212ENST00000440072 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
TRO-212ENST00000440072 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
TRO-212ENST00000440072 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
TRO-212ENST00000440072 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
TRO-212ENST00000440072 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
TRO-212ENST00000440072 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
TRO-212ENST00000440072 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.53
TRO-212ENST00000440072 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
TRO-212ENST00000440072 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
TRO-212ENST00000440072 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
TRO-212ENST00000440072 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
TRO-212ENST00000440072 ATAD2BQ9ULI0 1458 aa24.01■■□□□ 1.43
TRO-212ENST00000440072 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
TRO-212ENST00000440072 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
TRO-212ENST00000440072 PEG3Q9GZU2 1588 aa23.93■■□□□ 1.42
TRO-212ENST00000440072 HMGXB3Q12766 1538 aa23.91■■□□□ 1.42
TRO-212ENST00000440072 WIZO95785 1651 aa23.86■■□□□ 1.41
TRO-212ENST00000440072 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
TRO-212ENST00000440072 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
TRO-212ENST00000440072 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
TRO-212ENST00000440072 NESP48681 1621 aa23.52■■□□□ 1.36
TRO-212ENST00000440072 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
TRO-212ENST00000440072 ERCC6Q03468 1493 aa23.37■■□□□ 1.33
TRO-212ENST00000440072 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
TRO-212ENST00000440072 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
TRO-212ENST00000440072 CCDC88BA6NC98 1476 aa23.21■■□□□ 1.31
TRO-212ENST00000440072 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
TRO-212ENST00000440072 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
TRO-212ENST00000440072 PDS5BQ9NTI5 1447 aa23.15■■□□□ 1.3
TRO-212ENST00000440072 CFTRP13569 1480 aa23.13■■□□□ 1.29
TRO-212ENST00000440072 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
TRO-212ENST00000440072 CUX2O14529 1486 aa23.08■■□□□ 1.29
TRO-212ENST00000440072 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
TRO-212ENST00000440072 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
TRO-212ENST00000440072 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
TRO-212ENST00000440072 WDR62O43379 1518 aa22.96■■□□□ 1.27
TRO-212ENST00000440072 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
TRO-212ENST00000440072 TOPBP1Q92547 1522 aa22.71■■□□□ 1.23
TRO-212ENST00000440072 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
TRO-212ENST00000440072 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
TRO-212ENST00000440072 CUX1P39880 1505 aa22.57■■□□□ 1.2
TRO-212ENST00000440072 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
TRO-212ENST00000440072 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
TRO-212ENST00000440072 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
TRO-212ENST00000440072 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
TRO-212ENST00000440072 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
TRO-212ENST00000440072 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
TRO-212ENST00000440072 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
TRO-212ENST00000440072 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
TRO-212ENST00000440072 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
TRO-212ENST00000440072 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
TRO-212ENST00000440072 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
TRO-212ENST00000440072 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
TRO-212ENST00000440072 SOGA1O94964 1423 aa22.34■■□□□ 1.17
TRO-212ENST00000440072 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.16
TRO-212ENST00000440072 DNAJC5Q9H3Z4 198 aa22.27■■□□□ 1.16
TRO-212ENST00000440072 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
TRO-212ENST00000440072 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
TRO-212ENST00000440072 CHD1O14646 1710 aa22.25■■□□□ 1.15
TRO-212ENST00000440072 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
TRO-212ENST00000440072 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
TRO-212ENST00000440072 SNAPC4Q5SXM2 1469 aa22.16■■□□□ 1.14
TRO-212ENST00000440072 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
TRO-212ENST00000440072 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
TRO-212ENST00000440072 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
TRO-212ENST00000440072 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
TRO-212ENST00000440072 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
TRO-212ENST00000440072 FBLN2P98095 1184 aa22■■□□□ 1.11
TRO-212ENST00000440072 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
TRO-212ENST00000440072 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.1
TRO-212ENST00000440072 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
TRO-212ENST00000440072 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
TRO-212ENST00000440072 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
TRO-212ENST00000440072 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
TRO-212ENST00000440072 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.09
TRO-212ENST00000440072 GRIN2AQ12879 1464 aa21.87■■□□□ 1.09
TRO-212ENST00000440072 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
TRO-212ENST00000440072 CEP170Q5SW79 1584 aa21.84■■□□□ 1.09
TRO-212ENST00000440072 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
TRO-212ENST00000440072 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
TRO-212ENST00000440072 CUL7Q14999 1698 aa21.82■■□□□ 1.08
TRO-212ENST00000440072 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
TRO-212ENST00000440072 NUP160Q12769 1436 aa21.73■■□□□ 1.07
TRO-212ENST00000440072 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
TRO-212ENST00000440072 IGF1RP08069 1367 aa21.73■■□□□ 1.07
TRO-212ENST00000440072 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
TRO-212ENST00000440072 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
TRO-212ENST00000440072 ERCC6L2Q5T890 1561 aa21.65■■□□□ 1.06
TRO-212ENST00000440072 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
TRO-212ENST00000440072 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms