RNA–Protein interactions for RNA: ENST00000439545.1

HOTAIR-203, HOX transcript antisense RNA, humanhuman

TSL 4

Gene HOTAIR, Length 560 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIR-203ENST00000439545 NISCHQ9Y2I1 1504 aa32.66■■■□□ 2.82
HOTAIR-203ENST00000439545 CCDC180Q9P1Z9 1646 aa28.98■■■□□ 2.23
HOTAIR-203ENST00000439545 ABCC9O60706 1549 aa27.78■■■□□ 2.04
HOTAIR-203ENST00000439545 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
HOTAIR-203ENST00000439545 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
HOTAIR-203ENST00000439545 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
HOTAIR-203ENST00000439545 NACADO15069 1562 aa27.08■■□□□ 1.93
HOTAIR-203ENST00000439545 MYO15BQ96JP2 1530 aa27.05■■□□□ 1.92
HOTAIR-203ENST00000439545 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
HOTAIR-203ENST00000439545 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
HOTAIR-203ENST00000439545 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.81
HOTAIR-203ENST00000439545 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
HOTAIR-203ENST00000439545 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
HOTAIR-203ENST00000439545 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
HOTAIR-203ENST00000439545 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
HOTAIR-203ENST00000439545 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
HOTAIR-203ENST00000439545 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
HOTAIR-203ENST00000439545 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
HOTAIR-203ENST00000439545 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
HOTAIR-203ENST00000439545 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.61
HOTAIR-203ENST00000439545 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
HOTAIR-203ENST00000439545 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
HOTAIR-203ENST00000439545 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
HOTAIR-203ENST00000439545 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
HOTAIR-203ENST00000439545 WIZO95785 1651 aa24.94■■□□□ 1.58
HOTAIR-203ENST00000439545 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
HOTAIR-203ENST00000439545 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
HOTAIR-203ENST00000439545 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
HOTAIR-203ENST00000439545 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
HOTAIR-203ENST00000439545 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
HOTAIR-203ENST00000439545 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
HOTAIR-203ENST00000439545 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
HOTAIR-203ENST00000439545 LAMC3Q9Y6N6 1575 aa24.28■■□□□ 1.48
HOTAIR-203ENST00000439545 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
HOTAIR-203ENST00000439545 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
HOTAIR-203ENST00000439545 CFTRP13569 1480 aa24.16■■□□□ 1.46
HOTAIR-203ENST00000439545 NESP48681 1621 aa24.13■■□□□ 1.45
HOTAIR-203ENST00000439545 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.44
HOTAIR-203ENST00000439545 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
HOTAIR-203ENST00000439545 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
HOTAIR-203ENST00000439545 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
HOTAIR-203ENST00000439545 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
HOTAIR-203ENST00000439545 MRC2Q9UBG0 1479 aa23.79■■□□□ 1.4
HOTAIR-203ENST00000439545 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
HOTAIR-203ENST00000439545 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
HOTAIR-203ENST00000439545 WDR62O43379 1518 aa23.69■■□□□ 1.38
HOTAIR-203ENST00000439545 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
HOTAIR-203ENST00000439545 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.38
HOTAIR-203ENST00000439545 WRNQ14191 1432 aaPredicted RBP eCLIP23.63■■□□□ 1.37
HOTAIR-203ENST00000439545 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
HOTAIR-203ENST00000439545 CUX2O14529 1486 aa23.59■■□□□ 1.37
HOTAIR-203ENST00000439545 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
HOTAIR-203ENST00000439545 CUX1P39880 1505 aa23.57■■□□□ 1.36
HOTAIR-203ENST00000439545 TOP2BQ02880 1626 aa23.55■■□□□ 1.36
HOTAIR-203ENST00000439545 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
HOTAIR-203ENST00000439545 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
HOTAIR-203ENST00000439545 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
HOTAIR-203ENST00000439545 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
HOTAIR-203ENST00000439545 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
HOTAIR-203ENST00000439545 SOGA1O94964 1423 aa23.34■■□□□ 1.33
HOTAIR-203ENST00000439545 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
HOTAIR-203ENST00000439545 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
HOTAIR-203ENST00000439545 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
HOTAIR-203ENST00000439545 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
HOTAIR-203ENST00000439545 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
HOTAIR-203ENST00000439545 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
HOTAIR-203ENST00000439545 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
HOTAIR-203ENST00000439545 ZNF608Q9ULD9 1512 aaPredicted RBP23.15■■□□□ 1.3
HOTAIR-203ENST00000439545 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
HOTAIR-203ENST00000439545 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
HOTAIR-203ENST00000439545 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
HOTAIR-203ENST00000439545 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
HOTAIR-203ENST00000439545 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.29
HOTAIR-203ENST00000439545 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
HOTAIR-203ENST00000439545 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
HOTAIR-203ENST00000439545 EEA1Q15075 1411 aa23.02■■□□□ 1.28
HOTAIR-203ENST00000439545 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
HOTAIR-203ENST00000439545 CUL7Q14999 1698 aa22.97■■□□□ 1.27
HOTAIR-203ENST00000439545 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
HOTAIR-203ENST00000439545 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
HOTAIR-203ENST00000439545 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
HOTAIR-203ENST00000439545 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
HOTAIR-203ENST00000439545 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
HOTAIR-203ENST00000439545 IGF1RP08069 1367 aa22.85■■□□□ 1.25
HOTAIR-203ENST00000439545 CHD1O14646 1710 aa22.84■■□□□ 1.25
HOTAIR-203ENST00000439545 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
HOTAIR-203ENST00000439545 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
HOTAIR-203ENST00000439545 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
HOTAIR-203ENST00000439545 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
HOTAIR-203ENST00000439545 FBLN2P98095 1184 aa22.78■■□□□ 1.24
HOTAIR-203ENST00000439545 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
HOTAIR-203ENST00000439545 RAPGEF2Q9Y4G8 1499 aa22.75■■□□□ 1.23
HOTAIR-203ENST00000439545 KIF21BO75037 1637 aa22.73■■□□□ 1.23
HOTAIR-203ENST00000439545 PRXQ9BXM0 1461 aa22.72■■□□□ 1.23
HOTAIR-203ENST00000439545 GOLGA3Q08378 1498 aa22.63■■□□□ 1.21
HOTAIR-203ENST00000439545 CTTNBP2Q8WZ74 1663 aa22.62■■□□□ 1.21
HOTAIR-203ENST00000439545 OSCARQ8IYS5 282 aa22.62■■□□□ 1.21
HOTAIR-203ENST00000439545 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
HOTAIR-203ENST00000439545 NUP160Q12769 1436 aa22.6■■□□□ 1.21
HOTAIR-203ENST00000439545 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms