RNA–Protein interactions for RNA: ENST00000439513.1

ATAD3A-206, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-206ENST00000439513 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
ATAD3A-206ENST00000439513 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
ATAD3A-206ENST00000439513 ABCC9O60706 1549 aa31.91■■■□□ 2.7
ATAD3A-206ENST00000439513 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
ATAD3A-206ENST00000439513 NACADO15069 1562 aa30.3■■■□□ 2.44
ATAD3A-206ENST00000439513 DCAF8L2P0C7V8 631 aa30.14■■■□□ 2.42
ATAD3A-206ENST00000439513 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
ATAD3A-206ENST00000439513 ZCCHC6Q5VYS8 1495 aaKnown RBP29.84■■■□□ 2.37
ATAD3A-206ENST00000439513 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
ATAD3A-206ENST00000439513 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
ATAD3A-206ENST00000439513 PABPN1Q86U42 306 aaKnown RBP eCLIP29.74■■■□□ 2.35
ATAD3A-206ENST00000439513 DCAF1Q9Y4B6 1507 aa29.68■■■□□ 2.34
ATAD3A-206ENST00000439513 BICRAQ9NZM4 1560 aa29.63■■■□□ 2.33
ATAD3A-206ENST00000439513 SCRIBQ14160 1630 aa29.31■■■□□ 2.28
ATAD3A-206ENST00000439513 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
ATAD3A-206ENST00000439513 CC2D2AQ9P2K1 1620 aa28.84■■■□□ 2.21
ATAD3A-206ENST00000439513 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
ATAD3A-206ENST00000439513 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
ATAD3A-206ENST00000439513 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
ATAD3A-206ENST00000439513 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
ATAD3A-206ENST00000439513 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
ATAD3A-206ENST00000439513 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
ATAD3A-206ENST00000439513 BAZ1AQ9NRL2 1556 aaPredicted RBP27.84■■■□□ 2.05
ATAD3A-206ENST00000439513 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
ATAD3A-206ENST00000439513 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
ATAD3A-206ENST00000439513 PEG3Q9GZU2 1588 aa27.71■■■□□ 2.03
ATAD3A-206ENST00000439513 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
ATAD3A-206ENST00000439513 NESP48681 1621 aa27.51■■□□□ 1.99
ATAD3A-206ENST00000439513 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
ATAD3A-206ENST00000439513 WIZO95785 1651 aa27.38■■□□□ 1.97
ATAD3A-206ENST00000439513 CUX2O14529 1486 aa27.38■■□□□ 1.97
ATAD3A-206ENST00000439513 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
ATAD3A-206ENST00000439513 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
ATAD3A-206ENST00000439513 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
ATAD3A-206ENST00000439513 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.94
ATAD3A-206ENST00000439513 CADPSQ9ULU8 1353 aa27.13■■□□□ 1.93
ATAD3A-206ENST00000439513 PDS5BQ9NTI5 1447 aa27.11■■□□□ 1.93
ATAD3A-206ENST00000439513 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
ATAD3A-206ENST00000439513 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
ATAD3A-206ENST00000439513 MRC2Q9UBG0 1479 aa26.9■■□□□ 1.9
ATAD3A-206ENST00000439513 CFTRP13569 1480 aa26.89■■□□□ 1.9
ATAD3A-206ENST00000439513 WDR62O43379 1518 aa26.85■■□□□ 1.89
ATAD3A-206ENST00000439513 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
ATAD3A-206ENST00000439513 CEP164Q9UPV0 1460 aa26.83■■□□□ 1.89
ATAD3A-206ENST00000439513 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
ATAD3A-206ENST00000439513 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.85
ATAD3A-206ENST00000439513 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
ATAD3A-206ENST00000439513 TOPBP1Q92547 1522 aa26.37■■□□□ 1.81
ATAD3A-206ENST00000439513 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
ATAD3A-206ENST00000439513 ZNF608Q9ULD9 1512 aaPredicted RBP26.28■■□□□ 1.8
ATAD3A-206ENST00000439513 DNMBPQ6XZF7 1577 aa26.28■■□□□ 1.8
ATAD3A-206ENST00000439513 ABCC8Q09428 1581 aa26.25■■□□□ 1.79
ATAD3A-206ENST00000439513 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
ATAD3A-206ENST00000439513 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
ATAD3A-206ENST00000439513 EIF4G3O43432 1585 aaKnown RBP26.12■■□□□ 1.77
ATAD3A-206ENST00000439513 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
ATAD3A-206ENST00000439513 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
ATAD3A-206ENST00000439513 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.76
ATAD3A-206ENST00000439513 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
ATAD3A-206ENST00000439513 CUX1P39880 1505 aa26.02■■□□□ 1.76
ATAD3A-206ENST00000439513 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
ATAD3A-206ENST00000439513 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
ATAD3A-206ENST00000439513 SOGA1O94964 1423 aa25.97■■□□□ 1.75
ATAD3A-206ENST00000439513 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
ATAD3A-206ENST00000439513 CHD1O14646 1710 aa25.88■■□□□ 1.73
ATAD3A-206ENST00000439513 RIMBP3CA6NJZ7 1639 aa25.84■■□□□ 1.73
ATAD3A-206ENST00000439513 RIMBP3BA6NNM3 1639 aa25.84■■□□□ 1.73
ATAD3A-206ENST00000439513 RIMBP3Q9UFD9 1639 aa25.84■■□□□ 1.73
ATAD3A-206ENST00000439513 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
ATAD3A-206ENST00000439513 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
ATAD3A-206ENST00000439513 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
ATAD3A-206ENST00000439513 FBLN2P98095 1184 aa25.75■■□□□ 1.71
ATAD3A-206ENST00000439513 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
ATAD3A-206ENST00000439513 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.7
ATAD3A-206ENST00000439513 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
ATAD3A-206ENST00000439513 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
ATAD3A-206ENST00000439513 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
ATAD3A-206ENST00000439513 PBRM1Q86U86 1689 aa25.65■■□□□ 1.7
ATAD3A-206ENST00000439513 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
ATAD3A-206ENST00000439513 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.7
ATAD3A-206ENST00000439513 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
ATAD3A-206ENST00000439513 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
ATAD3A-206ENST00000439513 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
ATAD3A-206ENST00000439513 CLASP1Q7Z460 1538 aa25.6■■□□□ 1.69
ATAD3A-206ENST00000439513 CHMP7Q8WUX9 453 aaPredicted RBP25.6■■□□□ 1.69
ATAD3A-206ENST00000439513 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
ATAD3A-206ENST00000439513 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
ATAD3A-206ENST00000439513 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
ATAD3A-206ENST00000439513 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
ATAD3A-206ENST00000439513 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
ATAD3A-206ENST00000439513 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
ATAD3A-206ENST00000439513 CEP170Q5SW79 1584 aa25.33■■□□□ 1.65
ATAD3A-206ENST00000439513 NUP160Q12769 1436 aa25.32■■□□□ 1.64
ATAD3A-206ENST00000439513 ERCC6L2Q5T890 1561 aa25.26■■□□□ 1.63
ATAD3A-206ENST00000439513 SHROOM2Q13796 1616 aa25.19■■□□□ 1.62
ATAD3A-206ENST00000439513 TRHP20396 242 aaPredicted RBP25.13■■□□□ 1.61
ATAD3A-206ENST00000439513 IGF1RP08069 1367 aa25.11■■□□□ 1.61
ATAD3A-206ENST00000439513 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
ATAD3A-206ENST00000439513 RUSC2Q8N2Y8 1516 aa25.08■■□□□ 1.61
ATAD3A-206ENST00000439513 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms