RNA–Protein interactions for RNA: ENST00000439280.6

CARS-204, Transcript of cysteinyl-tRNA synthetase, humanhuman

TSL 3

Gene CARS, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARS-204ENST00000439280 NISCHQ9Y2I1 1504 aa44.46■■■■■ 4.71
CARS-204ENST00000439280 ABCC9O60706 1549 aa39.74■■■■□ 3.95
CARS-204ENST00000439280 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
CARS-204ENST00000439280 RB1CC1Q8TDY2 1594 aa37.68■■■■□ 3.62
CARS-204ENST00000439280 DCAF8L2P0C7V8 631 aa37.53■■■■□ 3.6
CARS-204ENST00000439280 NACADO15069 1562 aa37.45■■■■□ 3.59
CARS-204ENST00000439280 DNAJC5BQ9UF47 199 aa37.26■■■■□ 3.56
CARS-204ENST00000439280 UNC13AQ9UPW8 1703 aa37.11■■■■□ 3.53
CARS-204ENST00000439280 PABPN1Q86U42 306 aaKnown RBP eCLIP37.09■■■■□ 3.53
CARS-204ENST00000439280 MYO15BQ96JP2 1530 aa36.9■■■■□ 3.5
CARS-204ENST00000439280 ZCCHC6Q5VYS8 1495 aaKnown RBP36.89■■■■□ 3.5
CARS-204ENST00000439280 BICRAQ9NZM4 1560 aa36.82■■■■□ 3.48
CARS-204ENST00000439280 DCAF1Q9Y4B6 1507 aa36.57■■■■□ 3.44
CARS-204ENST00000439280 SCRIBQ14160 1630 aa36.41■■■■□ 3.42
CARS-204ENST00000439280 SHROOM4Q9ULL8 1493 aa35.91■■■■□ 3.34
CARS-204ENST00000439280 CC2D2AQ9P2K1 1620 aa35.86■■■■□ 3.33
CARS-204ENST00000439280 EIF4G1Q04637 1599 aaKnown RBP35.78■■■■□ 3.32
CARS-204ENST00000439280 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
CARS-204ENST00000439280 SMARCA4P51532 1647 aa34.66■■■■□ 3.14
CARS-204ENST00000439280 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
CARS-204ENST00000439280 NCAPD3P42695 1498 aa34.62■■■■□ 3.13
CARS-204ENST00000439280 SMARCA2P51531 1590 aa34.4■■■■□ 3.1
CARS-204ENST00000439280 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
CARS-204ENST00000439280 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
CARS-204ENST00000439280 HMGXB3Q12766 1538 aa34.35■■■■□ 3.09
CARS-204ENST00000439280 NESP48681 1621 aa34.28■■■■□ 3.08
CARS-204ENST00000439280 BAZ1BQ9UIG0 1483 aaKnown RBP34.25■■■■□ 3.07
CARS-204ENST00000439280 PEG3Q9GZU2 1588 aa34.22■■■■□ 3.07
CARS-204ENST00000439280 ERCC6Q03468 1493 aa34.12■■■■□ 3.05
CARS-204ENST00000439280 WIZO95785 1651 aa34.02■■■■□ 3.04
CARS-204ENST00000439280 CUX2O14529 1486 aa33.9■■■■□ 3.02
CARS-204ENST00000439280 KIF21AQ7Z4S6 1674 aa33.78■■■■□ 3
CARS-204ENST00000439280 DNAJC5Q9H3Z4 198 aa33.78■■■■□ 3
CARS-204ENST00000439280 LAMC3Q9Y6N6 1575 aa33.77■■■■□ 3
CARS-204ENST00000439280 THOC2Q8NI27 1593 aaKnown RBP33.77■■■■□ 3
CARS-204ENST00000439280 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
CARS-204ENST00000439280 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
CARS-204ENST00000439280 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
CARS-204ENST00000439280 TOP2AP11388 1531 aaKnown RBP33.43■■■□□ 2.94
CARS-204ENST00000439280 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
CARS-204ENST00000439280 CFTRP13569 1480 aa33.27■■■□□ 2.92
CARS-204ENST00000439280 FANCD2Q9BXW9 1451 aa33.26■■■□□ 2.92
CARS-204ENST00000439280 WDR62O43379 1518 aa33.26■■■□□ 2.91
CARS-204ENST00000439280 CEP164Q9UPV0 1460 aa33.22■■■□□ 2.91
CARS-204ENST00000439280 CCDC88BA6NC98 1476 aa33.14■■■□□ 2.9
CARS-204ENST00000439280 URB2Q14146 1524 aaKnown RBP33.08■■■□□ 2.89
CARS-204ENST00000439280 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
CARS-204ENST00000439280 TOPBP1Q92547 1522 aa32.69■■■□□ 2.82
CARS-204ENST00000439280 ZNF608Q9ULD9 1512 aaPredicted RBP32.69■■■□□ 2.82
CARS-204ENST00000439280 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
CARS-204ENST00000439280 IFT140Q96RY7 1462 aa32.52■■■□□ 2.8
CARS-204ENST00000439280 TRIM41Q8WV44 630 aa32.51■■■□□ 2.79
CARS-204ENST00000439280 SUPT5HO00267 1087 aaKnown RBP32.43■■■□□ 2.78
CARS-204ENST00000439280 OSCARQ8IYS5 282 aa32.43■■■□□ 2.78
CARS-204ENST00000439280 EIF4G3O43432 1585 aaKnown RBP32.42■■■□□ 2.78
CARS-204ENST00000439280 TARBP1Q13395 1621 aaKnown RBP32.42■■■□□ 2.78
CARS-204ENST00000439280 AQRO60306 1485 aaKnown RBP eCLIP32.38■■■□□ 2.772e-6■■■■□ 24.7
CARS-204ENST00000439280 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
CARS-204ENST00000439280 POLA1P09884 1462 aaPredicted RBP32.37■■■□□ 2.77
CARS-204ENST00000439280 RAD54L2Q9Y4B4 1467 aa32.36■■■□□ 2.77
CARS-204ENST00000439280 CUX1P39880 1505 aa32.28■■■□□ 2.76
CARS-204ENST00000439280 FGD5Q6ZNL6 1462 aa32.22■■■□□ 2.75
CARS-204ENST00000439280 CHD1O14646 1710 aa32.2■■■□□ 2.75
CARS-204ENST00000439280 TDRD9Q8NDG6 1382 aaKnown RBP32.19■■■□□ 2.74
CARS-204ENST00000439280 SOGA1O94964 1423 aa32.17■■■□□ 2.74
CARS-204ENST00000439280 RIMBP3CA6NJZ7 1639 aa32.16■■■□□ 2.74
CARS-204ENST00000439280 RIMBP3BA6NNM3 1639 aa32.16■■■□□ 2.74
CARS-204ENST00000439280 RIMBP3Q9UFD9 1639 aa32.16■■■□□ 2.74
CARS-204ENST00000439280 FBLN2P98095 1184 aa32.05■■■□□ 2.72
CARS-204ENST00000439280 ARHGEF11O15085 1522 aa32.03■■■□□ 2.72
CARS-204ENST00000439280 SNAPC4Q5SXM2 1469 aa32■■■□□ 2.71
CARS-204ENST00000439280 WDR97A6NE52 1622 aa32■■■□□ 2.71
CARS-204ENST00000439280 PBRM1Q86U86 1689 aa31.83■■■□□ 2.69
CARS-204ENST00000439280 GRIN2BQ13224 1484 aa31.83■■■□□ 2.69
CARS-204ENST00000439280 SYNJ1O43426 1573 aa31.81■■■□□ 2.68
CARS-204ENST00000439280 CYB5RLQ6IPT4 315 aa31.8■■■□□ 2.68
CARS-204ENST00000439280 ARAP1Q96P48 1450 aa31.79■■■□□ 2.68
CARS-204ENST00000439280 GAPVD1Q14C86 1478 aa31.78■■■□□ 2.68
CARS-204ENST00000439280 ABCA10Q8WWZ4 1543 aa31.78■■■□□ 2.68
CARS-204ENST00000439280 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
CARS-204ENST00000439280 MAGI1Q96QZ7 1491 aaPredicted RBP31.77■■■□□ 2.68
CARS-204ENST00000439280 CLASP1Q7Z460 1538 aa31.76■■■□□ 2.68
CARS-204ENST00000439280 CHMP7Q8WUX9 453 aaPredicted RBP31.75■■■□□ 2.67
CARS-204ENST00000439280 BIVM-ERCC5R4GMW8 1640 aa31.72■■■□□ 2.67
CARS-204ENST00000439280 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
CARS-204ENST00000439280 SYNJ2O15056 1496 aa31.7■■■□□ 2.66
CARS-204ENST00000439280 WRNQ14191 1432 aaPredicted RBP eCLIP31.68■■■□□ 2.66
CARS-204ENST00000439280 ADAMTS12P58397 1594 aa31.52■■■□□ 2.64
CARS-204ENST00000439280 ERCC6L2Q5T890 1561 aa31.49■■■□□ 2.63
CARS-204ENST00000439280 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
CARS-204ENST00000439280 CEP170Q5SW79 1584 aa31.46■■■□□ 2.63
CARS-204ENST00000439280 NUP160Q12769 1436 aa31.35■■■□□ 2.61
CARS-204ENST00000439280 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
CARS-204ENST00000439280 ERICH3Q5RHP9 1530 aa31.33■■■□□ 2.61
CARS-204ENST00000439280 TRHP20396 242 aaPredicted RBP31.32■■■□□ 2.6
CARS-204ENST00000439280 SHROOM2Q13796 1616 aa31.22■■■□□ 2.59
CARS-204ENST00000439280 IGF1RP08069 1367 aa31.1■■■□□ 2.57
CARS-204ENST00000439280 RUSC2Q8N2Y8 1516 aa31.08■■■□□ 2.57
CARS-204ENST00000439280 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.56
CARS-204ENST00000439280 JPH4Q96JJ6 628 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms