RNA–Protein interactions for RNA: ENST00000439264.1

SFTPA1-205, Transcript of surfactant protein A1, humanhuman

TSL 1 (best)

Gene SFTPA1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-205ENST00000439264 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
SFTPA1-205ENST00000439264 ABCC9O60706 1549 aa33.58■■■□□ 2.97
SFTPA1-205ENST00000439264 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.92
SFTPA1-205ENST00000439264 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
SFTPA1-205ENST00000439264 RB1CC1Q8TDY2 1594 aa31.8■■■□□ 2.68
SFTPA1-205ENST00000439264 NACADO15069 1562 aa31.51■■■□□ 2.64
SFTPA1-205ENST00000439264 UNC13AQ9UPW8 1703 aa31.28■■■□□ 2.6
SFTPA1-205ENST00000439264 PABPN1Q86U42 306 aaKnown RBP eCLIP31.14■■■□□ 2.58
SFTPA1-205ENST00000439264 BICRAQ9NZM4 1560 aa31.06■■■□□ 2.56
SFTPA1-205ENST00000439264 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
SFTPA1-205ENST00000439264 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
SFTPA1-205ENST00000439264 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
SFTPA1-205ENST00000439264 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
SFTPA1-205ENST00000439264 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
SFTPA1-205ENST00000439264 CC2D2AQ9P2K1 1620 aa30.37■■■□□ 2.45
SFTPA1-205ENST00000439264 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
SFTPA1-205ENST00000439264 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.44
SFTPA1-205ENST00000439264 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
SFTPA1-205ENST00000439264 DNAJC5Q9H3Z4 198 aa29.45■■■□□ 2.31
SFTPA1-205ENST00000439264 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
SFTPA1-205ENST00000439264 CUX2O14529 1486 aa29.07■■■□□ 2.24
SFTPA1-205ENST00000439264 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
SFTPA1-205ENST00000439264 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
SFTPA1-205ENST00000439264 ERCC6Q03468 1493 aa28.9■■■□□ 2.22
SFTPA1-205ENST00000439264 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
SFTPA1-205ENST00000439264 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
SFTPA1-205ENST00000439264 NESP48681 1621 aa28.8■■■□□ 2.2
SFTPA1-205ENST00000439264 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
SFTPA1-205ENST00000439264 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
SFTPA1-205ENST00000439264 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
SFTPA1-205ENST00000439264 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
SFTPA1-205ENST00000439264 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
SFTPA1-205ENST00000439264 MROH2BQ7Z745 1585 aa28.47■■■□□ 2.15
SFTPA1-205ENST00000439264 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
SFTPA1-205ENST00000439264 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
SFTPA1-205ENST00000439264 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
SFTPA1-205ENST00000439264 WDR62O43379 1518 aa28.12■■■□□ 2.09
SFTPA1-205ENST00000439264 WIZO95785 1651 aa28.11■■■□□ 2.09
SFTPA1-205ENST00000439264 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
SFTPA1-205ENST00000439264 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
SFTPA1-205ENST00000439264 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
SFTPA1-205ENST00000439264 FANCD2Q9BXW9 1451 aa27.85■■■□□ 2.05
SFTPA1-205ENST00000439264 CFTRP13569 1480 aa27.83■■■□□ 2.04
SFTPA1-205ENST00000439264 URB2Q14146 1524 aaKnown RBP27.73■■■□□ 2.03
SFTPA1-205ENST00000439264 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
SFTPA1-205ENST00000439264 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.02
SFTPA1-205ENST00000439264 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
SFTPA1-205ENST00000439264 OSCARQ8IYS5 282 aa27.57■■■□□ 2
SFTPA1-205ENST00000439264 ZNF608Q9ULD9 1512 aaPredicted RBP27.44■■□□□ 1.98
SFTPA1-205ENST00000439264 RIMBP3CA6NJZ7 1639 aa27.44■■□□□ 1.98
SFTPA1-205ENST00000439264 RIMBP3BA6NNM3 1639 aa27.44■■□□□ 1.98
SFTPA1-205ENST00000439264 RIMBP3Q9UFD9 1639 aa27.44■■□□□ 1.98
SFTPA1-205ENST00000439264 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
SFTPA1-205ENST00000439264 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
SFTPA1-205ENST00000439264 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
SFTPA1-205ENST00000439264 ARHGEF11O15085 1522 aa27.28■■□□□ 1.96
SFTPA1-205ENST00000439264 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
SFTPA1-205ENST00000439264 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
SFTPA1-205ENST00000439264 DNMBPQ6XZF7 1577 aa27.19■■□□□ 1.94
SFTPA1-205ENST00000439264 CHD1O14646 1710 aa27.16■■□□□ 1.94
SFTPA1-205ENST00000439264 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
SFTPA1-205ENST00000439264 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.92
SFTPA1-205ENST00000439264 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
SFTPA1-205ENST00000439264 ARAP1Q96P48 1450 aa27.01■■□□□ 1.91
SFTPA1-205ENST00000439264 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
SFTPA1-205ENST00000439264 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
SFTPA1-205ENST00000439264 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
SFTPA1-205ENST00000439264 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.88
SFTPA1-205ENST00000439264 SOGA1O94964 1423 aa26.81■■□□□ 1.88
SFTPA1-205ENST00000439264 WDR97A6NE52 1622 aa26.8■■□□□ 1.88
SFTPA1-205ENST00000439264 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
SFTPA1-205ENST00000439264 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
SFTPA1-205ENST00000439264 FBLN2P98095 1184 aa26.78■■□□□ 1.88
SFTPA1-205ENST00000439264 CUX1P39880 1505 aa26.77■■□□□ 1.88
SFTPA1-205ENST00000439264 MAGI1Q96QZ7 1491 aaPredicted RBP26.7■■□□□ 1.87
SFTPA1-205ENST00000439264 TRHP20396 242 aaPredicted RBP26.67■■□□□ 1.86
SFTPA1-205ENST00000439264 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
SFTPA1-205ENST00000439264 GRIN2BQ13224 1484 aa26.64■■□□□ 1.86
SFTPA1-205ENST00000439264 PBRM1Q86U86 1689 aa26.62■■□□□ 1.85
SFTPA1-205ENST00000439264 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
SFTPA1-205ENST00000439264 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
SFTPA1-205ENST00000439264 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
SFTPA1-205ENST00000439264 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
SFTPA1-205ENST00000439264 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
SFTPA1-205ENST00000439264 ERCC6L2Q5T890 1561 aa26.43■■□□□ 1.82
SFTPA1-205ENST00000439264 GRIN2AQ12879 1464 aa26.34■■□□□ 1.81
SFTPA1-205ENST00000439264 ADAMTS12P58397 1594 aa26.33■■□□□ 1.81
SFTPA1-205ENST00000439264 CEP170Q5SW79 1584 aa26.33■■□□□ 1.8
SFTPA1-205ENST00000439264 NUP160Q12769 1436 aa26.31■■□□□ 1.8
SFTPA1-205ENST00000439264 SHROOM2Q13796 1616 aa26.29■■□□□ 1.8
SFTPA1-205ENST00000439264 BIVM-ERCC5R4GMW8 1640 aa26.27■■□□□ 1.8
SFTPA1-205ENST00000439264 TOP2BQ02880 1626 aa26.22■■□□□ 1.79
SFTPA1-205ENST00000439264 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
SFTPA1-205ENST00000439264 KIF13AQ9H1H9 1805 aa26.16■■□□□ 1.78
SFTPA1-205ENST00000439264 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.78
SFTPA1-205ENST00000439264 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
SFTPA1-205ENST00000439264 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
SFTPA1-205ENST00000439264 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
SFTPA1-205ENST00000439264 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
SFTPA1-205ENST00000439264 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms