RNA–Protein interactions for RNA: ENST00000439200.5

CHEK2-216, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 906 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-216ENST00000439200 NISCHQ9Y2I1 1504 aa33.54■■■□□ 2.96
CHEK2-216ENST00000439200 ABCC9O60706 1549 aa30.42■■■□□ 2.46
CHEK2-216ENST00000439200 CCDC180Q9P1Z9 1646 aa30.17■■■□□ 2.42
CHEK2-216ENST00000439200 RB1CC1Q8TDY2 1594 aa28.83■■■□□ 2.21
CHEK2-216ENST00000439200 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
CHEK2-216ENST00000439200 NACADO15069 1562 aa28.56■■■□□ 2.16
CHEK2-216ENST00000439200 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
CHEK2-216ENST00000439200 PABPN1Q86U42 306 aaKnown RBP eCLIP28.28■■■□□ 2.12
CHEK2-216ENST00000439200 UNC13AQ9UPW8 1703 aa28.19■■■□□ 2.1
CHEK2-216ENST00000439200 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
CHEK2-216ENST00000439200 BICRAQ9NZM4 1560 aa28.02■■■□□ 2.08
CHEK2-216ENST00000439200 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.04
CHEK2-216ENST00000439200 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
CHEK2-216ENST00000439200 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
CHEK2-216ENST00000439200 SCRIBQ14160 1630 aa27.54■■■□□ 2
CHEK2-216ENST00000439200 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
CHEK2-216ENST00000439200 CECR2Q9BXF3 1484 aa27.4■■□□□ 1.98
CHEK2-216ENST00000439200 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
CHEK2-216ENST00000439200 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
CHEK2-216ENST00000439200 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
CHEK2-216ENST00000439200 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
CHEK2-216ENST00000439200 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
CHEK2-216ENST00000439200 CUX2O14529 1486 aa26.25■■□□□ 1.79
CHEK2-216ENST00000439200 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
CHEK2-216ENST00000439200 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
CHEK2-216ENST00000439200 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
CHEK2-216ENST00000439200 NESP48681 1621 aa26.07■■□□□ 1.76
CHEK2-216ENST00000439200 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
CHEK2-216ENST00000439200 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
CHEK2-216ENST00000439200 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
CHEK2-216ENST00000439200 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
CHEK2-216ENST00000439200 THOC2Q8NI27 1593 aaKnown RBP25.85■■□□□ 1.73
CHEK2-216ENST00000439200 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
CHEK2-216ENST00000439200 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
CHEK2-216ENST00000439200 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
CHEK2-216ENST00000439200 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
CHEK2-216ENST00000439200 WIZO95785 1651 aa25.55■■□□□ 1.68
CHEK2-216ENST00000439200 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
CHEK2-216ENST00000439200 WDR62O43379 1518 aa25.42■■□□□ 1.66
CHEK2-216ENST00000439200 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
CHEK2-216ENST00000439200 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
CHEK2-216ENST00000439200 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
CHEK2-216ENST00000439200 CFTRP13569 1480 aa25.23■■□□□ 1.63
CHEK2-216ENST00000439200 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
CHEK2-216ENST00000439200 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
CHEK2-216ENST00000439200 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
CHEK2-216ENST00000439200 OSCARQ8IYS5 282 aa24.99■■□□□ 1.59
CHEK2-216ENST00000439200 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
CHEK2-216ENST00000439200 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
CHEK2-216ENST00000439200 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
CHEK2-216ENST00000439200 IFT140Q96RY7 1462 aa24.83■■□□□ 1.56
CHEK2-216ENST00000439200 TOPBP1Q92547 1522 aa24.8■■□□□ 1.56
CHEK2-216ENST00000439200 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
CHEK2-216ENST00000439200 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
CHEK2-216ENST00000439200 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
CHEK2-216ENST00000439200 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
CHEK2-216ENST00000439200 DNMBPQ6XZF7 1577 aa24.69■■□□□ 1.54
CHEK2-216ENST00000439200 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
CHEK2-216ENST00000439200 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
CHEK2-216ENST00000439200 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
CHEK2-216ENST00000439200 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.531e-11■■■■■ 27.3
CHEK2-216ENST00000439200 CHD1O14646 1710 aa24.55■■□□□ 1.52
CHEK2-216ENST00000439200 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
CHEK2-216ENST00000439200 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
CHEK2-216ENST00000439200 FBLN2P98095 1184 aa24.46■■□□□ 1.51
CHEK2-216ENST00000439200 CYB5RLQ6IPT4 315 aa24.46■■□□□ 1.51
CHEK2-216ENST00000439200 ARAP1Q96P48 1450 aa24.4■■□□□ 1.5
CHEK2-216ENST00000439200 SOGA1O94964 1423 aa24.4■■□□□ 1.5
CHEK2-216ENST00000439200 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
CHEK2-216ENST00000439200 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
CHEK2-216ENST00000439200 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
CHEK2-216ENST00000439200 CUX1P39880 1505 aa24.31■■□□□ 1.48
CHEK2-216ENST00000439200 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
CHEK2-216ENST00000439200 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
CHEK2-216ENST00000439200 TRHP20396 242 aaPredicted RBP24.26■■□□□ 1.47
CHEK2-216ENST00000439200 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
CHEK2-216ENST00000439200 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
CHEK2-216ENST00000439200 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
CHEK2-216ENST00000439200 SYNJ1O43426 1573 aa24.21■■□□□ 1.47
CHEK2-216ENST00000439200 SYNJ2O15056 1496 aa24.16■■□□□ 1.46
CHEK2-216ENST00000439200 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
CHEK2-216ENST00000439200 GAPVD1Q14C86 1478 aa24.11■■□□□ 1.45
CHEK2-216ENST00000439200 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
CHEK2-216ENST00000439200 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
CHEK2-216ENST00000439200 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
CHEK2-216ENST00000439200 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
CHEK2-216ENST00000439200 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
CHEK2-216ENST00000439200 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
CHEK2-216ENST00000439200 ERCC6L2Q5T890 1561 aa23.9■■□□□ 1.42
CHEK2-216ENST00000439200 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
CHEK2-216ENST00000439200 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
CHEK2-216ENST00000439200 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
CHEK2-216ENST00000439200 NUP160Q12769 1436 aa23.84■■□□□ 1.41
CHEK2-216ENST00000439200 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
CHEK2-216ENST00000439200 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
CHEK2-216ENST00000439200 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
CHEK2-216ENST00000439200 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
CHEK2-216ENST00000439200 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
CHEK2-216ENST00000439200 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
CHEK2-216ENST00000439200 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms