RNA–Protein interactions for RNA: ENST00000438907.3

TBRG1-202, Transcript of transforming growth factor beta regulator 1, humanhuman

TSL 1 (best)

Gene TBRG1, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG1-202ENST00000438907 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
TBRG1-202ENST00000438907 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
TBRG1-202ENST00000438907 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
TBRG1-202ENST00000438907 DCAF1Q9Y4B6 1507 aa19.82■□□□□ 0.76
TBRG1-202ENST00000438907 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
TBRG1-202ENST00000438907 ABCC9O60706 1549 aa19.36■□□□□ 0.69
TBRG1-202ENST00000438907 NACADO15069 1562 aa19.33■□□□□ 0.69
TBRG1-202ENST00000438907 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
TBRG1-202ENST00000438907 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
TBRG1-202ENST00000438907 RB1CC1Q8TDY2 1594 aa19.11■□□□□ 0.65
TBRG1-202ENST00000438907 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
TBRG1-202ENST00000438907 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
TBRG1-202ENST00000438907 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
TBRG1-202ENST00000438907 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
TBRG1-202ENST00000438907 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
TBRG1-202ENST00000438907 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
TBRG1-202ENST00000438907 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
TBRG1-202ENST00000438907 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
TBRG1-202ENST00000438907 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
TBRG1-202ENST00000438907 WIZO95785 1651 aa18.28■□□□□ 0.52
TBRG1-202ENST00000438907 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
TBRG1-202ENST00000438907 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
TBRG1-202ENST00000438907 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
TBRG1-202ENST00000438907 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
TBRG1-202ENST00000438907 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
TBRG1-202ENST00000438907 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
TBRG1-202ENST00000438907 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
TBRG1-202ENST00000438907 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
TBRG1-202ENST00000438907 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
TBRG1-202ENST00000438907 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
TBRG1-202ENST00000438907 NCAPD3P42695 1498 aa17.78■□□□□ 0.44
TBRG1-202ENST00000438907 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
TBRG1-202ENST00000438907 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
TBRG1-202ENST00000438907 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
TBRG1-202ENST00000438907 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
TBRG1-202ENST00000438907 CFTRP13569 1480 aa17.42■□□□□ 0.38
TBRG1-202ENST00000438907 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
TBRG1-202ENST00000438907 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
TBRG1-202ENST00000438907 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
TBRG1-202ENST00000438907 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
TBRG1-202ENST00000438907 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
TBRG1-202ENST00000438907 EEA1Q15075 1411 aa17.22■□□□□ 0.35
TBRG1-202ENST00000438907 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
TBRG1-202ENST00000438907 CUX1P39880 1505 aa17.21■□□□□ 0.34
TBRG1-202ENST00000438907 SOGA1O94964 1423 aa17.14■□□□□ 0.33
TBRG1-202ENST00000438907 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
TBRG1-202ENST00000438907 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
TBRG1-202ENST00000438907 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
TBRG1-202ENST00000438907 KIF21BO75037 1637 aa17.09■□□□□ 0.33
TBRG1-202ENST00000438907 NESP48681 1621 aa17.07■□□□□ 0.32
TBRG1-202ENST00000438907 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
TBRG1-202ENST00000438907 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
TBRG1-202ENST00000438907 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
TBRG1-202ENST00000438907 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
TBRG1-202ENST00000438907 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
TBRG1-202ENST00000438907 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
TBRG1-202ENST00000438907 WDR97A6NE52 1622 aa16.96■□□□□ 0.31
TBRG1-202ENST00000438907 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
TBRG1-202ENST00000438907 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
TBRG1-202ENST00000438907 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
TBRG1-202ENST00000438907 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
TBRG1-202ENST00000438907 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
TBRG1-202ENST00000438907 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
TBRG1-202ENST00000438907 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
TBRG1-202ENST00000438907 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
TBRG1-202ENST00000438907 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
TBRG1-202ENST00000438907 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
TBRG1-202ENST00000438907 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
TBRG1-202ENST00000438907 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
TBRG1-202ENST00000438907 CUX2O14529 1486 aa16.81■□□□□ 0.28
TBRG1-202ENST00000438907 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
TBRG1-202ENST00000438907 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
TBRG1-202ENST00000438907 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
TBRG1-202ENST00000438907 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
TBRG1-202ENST00000438907 WDR62O43379 1518 aa16.77■□□□□ 0.28
TBRG1-202ENST00000438907 CUL7Q14999 1698 aa16.77■□□□□ 0.28
TBRG1-202ENST00000438907 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
TBRG1-202ENST00000438907 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
TBRG1-202ENST00000438907 IGF1RP08069 1367 aa16.72■□□□□ 0.27
TBRG1-202ENST00000438907 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
TBRG1-202ENST00000438907 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
TBRG1-202ENST00000438907 CTTNBP2Q8WZ74 1663 aa16.65■□□□□ 0.26
TBRG1-202ENST00000438907 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
TBRG1-202ENST00000438907 CLIP1P30622 1438 aa16.63■□□□□ 0.25
TBRG1-202ENST00000438907 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
TBRG1-202ENST00000438907 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
TBRG1-202ENST00000438907 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
TBRG1-202ENST00000438907 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
TBRG1-202ENST00000438907 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
TBRG1-202ENST00000438907 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
TBRG1-202ENST00000438907 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
TBRG1-202ENST00000438907 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
TBRG1-202ENST00000438907 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
TBRG1-202ENST00000438907 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
TBRG1-202ENST00000438907 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
TBRG1-202ENST00000438907 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
TBRG1-202ENST00000438907 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
TBRG1-202ENST00000438907 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
TBRG1-202ENST00000438907 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
TBRG1-202ENST00000438907 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms