RNA–Protein interactions for RNA: ENST00000438886.1

APEX1-203, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-203ENST00000438886 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
APEX1-203ENST00000438886 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
APEX1-203ENST00000438886 ABCC9O60706 1549 aa17.16■□□□□ 0.34
APEX1-203ENST00000438886 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
APEX1-203ENST00000438886 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
APEX1-203ENST00000438886 DCAF1Q9Y4B6 1507 aa16.82■□□□□ 0.28
APEX1-203ENST00000438886 NACADO15069 1562 aa16.79■□□□□ 0.28
APEX1-203ENST00000438886 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
APEX1-203ENST00000438886 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
APEX1-203ENST00000438886 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
APEX1-203ENST00000438886 SCRIBQ14160 1630 aa16.27■□□□□ 0.19
APEX1-203ENST00000438886 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
APEX1-203ENST00000438886 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
APEX1-203ENST00000438886 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
APEX1-203ENST00000438886 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
APEX1-203ENST00000438886 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
APEX1-203ENST00000438886 SMARCA4P51532 1647 aa15.64■□□□□ 0.09
APEX1-203ENST00000438886 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
APEX1-203ENST00000438886 CC2D2AQ9P2K1 1620 aa15.58■□□□□ 0.09
APEX1-203ENST00000438886 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
APEX1-203ENST00000438886 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
APEX1-203ENST00000438886 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.07
APEX1-203ENST00000438886 ATAD2BQ9ULI0 1458 aa15.46■□□□□ 0.07
APEX1-203ENST00000438886 NCAPD3P42695 1498 aa15.46■□□□□ 0.06
APEX1-203ENST00000438886 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
APEX1-203ENST00000438886 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
APEX1-203ENST00000438886 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
APEX1-203ENST00000438886 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
APEX1-203ENST00000438886 WIZO95785 1651 aa15.37■□□□□ 0.05
APEX1-203ENST00000438886 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
APEX1-203ENST00000438886 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
APEX1-203ENST00000438886 LAMC3Q9Y6N6 1575 aa15.05■□□□□ -0
APEX1-203ENST00000438886 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
APEX1-203ENST00000438886 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
APEX1-203ENST00000438886 CFTRP13569 1480 aa14.97□□□□□ -0.01
APEX1-203ENST00000438886 PRDM2Q13029 1718 aa14.96□□□□□ -0.01
APEX1-203ENST00000438886 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
APEX1-203ENST00000438886 NESP48681 1621 aa14.9□□□□□ -0.02
APEX1-203ENST00000438886 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
APEX1-203ENST00000438886 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
APEX1-203ENST00000438886 CEP164Q9UPV0 1460 aa14.81□□□□□ -0.04
APEX1-203ENST00000438886 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
APEX1-203ENST00000438886 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
APEX1-203ENST00000438886 THOC2Q8NI27 1593 aaKnown RBP14.72□□□□□ -0.05
APEX1-203ENST00000438886 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
APEX1-203ENST00000438886 WDR62O43379 1518 aa14.67□□□□□ -0.06
APEX1-203ENST00000438886 CUX2O14529 1486 aa14.65□□□□□ -0.06
APEX1-203ENST00000438886 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
APEX1-203ENST00000438886 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
APEX1-203ENST00000438886 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
APEX1-203ENST00000438886 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.07
APEX1-203ENST00000438886 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
APEX1-203ENST00000438886 CUX1P39880 1505 aa14.56□□□□□ -0.08
APEX1-203ENST00000438886 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
APEX1-203ENST00000438886 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
APEX1-203ENST00000438886 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
APEX1-203ENST00000438886 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
APEX1-203ENST00000438886 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
APEX1-203ENST00000438886 WDR97A6NE52 1622 aa14.46□□□□□ -0.09
APEX1-203ENST00000438886 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
APEX1-203ENST00000438886 SOGA1O94964 1423 aa14.42□□□□□ -0.1
APEX1-203ENST00000438886 ABCA10Q8WWZ4 1543 aa14.41□□□□□ -0.1
APEX1-203ENST00000438886 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
APEX1-203ENST00000438886 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
APEX1-203ENST00000438886 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
APEX1-203ENST00000438886 ABCA5Q8WWZ7 1642 aa14.33□□□□□ -0.12
APEX1-203ENST00000438886 CHIC1Q5VXU3 224 aa14.31□□□□□ -0.12
APEX1-203ENST00000438886 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
APEX1-203ENST00000438886 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
APEX1-203ENST00000438886 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
APEX1-203ENST00000438886 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
APEX1-203ENST00000438886 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
APEX1-203ENST00000438886 ERICH3Q5RHP9 1530 aa14.26□□□□□ -0.13
APEX1-203ENST00000438886 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
APEX1-203ENST00000438886 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■□□□□ 9
APEX1-203ENST00000438886 MAGI1Q96QZ7 1491 aaPredicted RBP14.24□□□□□ -0.13
APEX1-203ENST00000438886 EEA1Q15075 1411 aa14.24□□□□□ -0.13
APEX1-203ENST00000438886 CUL7Q14999 1698 aa14.2□□□□□ -0.14
APEX1-203ENST00000438886 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
APEX1-203ENST00000438886 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
APEX1-203ENST00000438886 SYNJ2O15056 1496 aa14.15□□□□□ -0.14
APEX1-203ENST00000438886 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
APEX1-203ENST00000438886 IGF1RP08069 1367 aa14.14□□□□□ -0.15
APEX1-203ENST00000438886 CHD1O14646 1710 aa14.1□□□□□ -0.15
APEX1-203ENST00000438886 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
APEX1-203ENST00000438886 CARMIL1Q5VZK9 1371 aa14.08□□□□□ -0.16
APEX1-203ENST00000438886 GRIN2AQ12879 1464 aa14.07□□□□□ -0.16
APEX1-203ENST00000438886 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
APEX1-203ENST00000438886 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
APEX1-203ENST00000438886 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
APEX1-203ENST00000438886 RAPGEF2Q9Y4G8 1499 aa14.06□□□□□ -0.16
APEX1-203ENST00000438886 KIF21BO75037 1637 aa14.03□□□□□ -0.16
APEX1-203ENST00000438886 NUP160Q12769 1436 aa14.01□□□□□ -0.17
APEX1-203ENST00000438886 FBLN2P98095 1184 aa14.01□□□□□ -0.17
APEX1-203ENST00000438886 OSCARQ8IYS5 282 aa14□□□□□ -0.17
APEX1-203ENST00000438886 CEP170Q5SW79 1584 aa13.97□□□□□ -0.17
APEX1-203ENST00000438886 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
APEX1-203ENST00000438886 CTTNBP2Q8WZ74 1663 aa13.95□□□□□ -0.18
APEX1-203ENST00000438886 KIAA0586Q9BVV6 1533 aa13.95□□□□□ -0.18
APEX1-203ENST00000438886 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms