RNA–Protein interactions for RNA: ENST00000438672.5

EFEMP1-206, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-206ENST00000438672 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
EFEMP1-206ENST00000438672 CCDC180Q9P1Z9 1646 aa35.82■■■■□ 3.32
EFEMP1-206ENST00000438672 ABCC9O60706 1549 aa35.49■■■■□ 3.27
EFEMP1-206ENST00000438672 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
EFEMP1-206ENST00000438672 NACADO15069 1562 aa33.76■■■□□ 2.99
EFEMP1-206ENST00000438672 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
EFEMP1-206ENST00000438672 MYO15BQ96JP2 1530 aa33.39■■■□□ 2.94
EFEMP1-206ENST00000438672 ZCCHC6Q5VYS8 1495 aaKnown RBP33.3■■■□□ 2.92
EFEMP1-206ENST00000438672 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
EFEMP1-206ENST00000438672 DCAF1Q9Y4B6 1507 aa33.09■■■□□ 2.89
EFEMP1-206ENST00000438672 PABPN1Q86U42 306 aaKnown RBP eCLIP33.06■■■□□ 2.88
EFEMP1-206ENST00000438672 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
EFEMP1-206ENST00000438672 BICRAQ9NZM4 1560 aa32.94■■■□□ 2.86
EFEMP1-206ENST00000438672 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
EFEMP1-206ENST00000438672 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.79
EFEMP1-206ENST00000438672 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
EFEMP1-206ENST00000438672 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
EFEMP1-206ENST00000438672 CECR2Q9BXF3 1484 aa31.93■■■□□ 2.7
EFEMP1-206ENST00000438672 SMARCA4P51532 1647 aa31.2■■■□□ 2.58
EFEMP1-206ENST00000438672 NCAPD3P42695 1498 aa31.14■■■□□ 2.58
EFEMP1-206ENST00000438672 ATAD2BQ9ULI0 1458 aa31.12■■■□□ 2.57
EFEMP1-206ENST00000438672 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
EFEMP1-206ENST00000438672 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
EFEMP1-206ENST00000438672 HMGXB3Q12766 1538 aa30.98■■■□□ 2.55
EFEMP1-206ENST00000438672 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
EFEMP1-206ENST00000438672 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
EFEMP1-206ENST00000438672 BAZ1BQ9UIG0 1483 aaKnown RBP30.84■■■□□ 2.53
EFEMP1-206ENST00000438672 ERCC6Q03468 1493 aa30.61■■■□□ 2.49
EFEMP1-206ENST00000438672 NESP48681 1621 aa30.59■■■□□ 2.49
EFEMP1-206ENST00000438672 WIZO95785 1651 aa30.53■■■□□ 2.48
EFEMP1-206ENST00000438672 CUX2O14529 1486 aa30.44■■■□□ 2.46
EFEMP1-206ENST00000438672 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
EFEMP1-206ENST00000438672 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
EFEMP1-206ENST00000438672 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
EFEMP1-206ENST00000438672 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
EFEMP1-206ENST00000438672 CADPSQ9ULU8 1353 aa30.21■■■□□ 2.43
EFEMP1-206ENST00000438672 PDS5BQ9NTI5 1447 aa30.19■■■□□ 2.42
EFEMP1-206ENST00000438672 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
EFEMP1-206ENST00000438672 DNAJC5Q9H3Z4 198 aa29.98■■■□□ 2.39
EFEMP1-206ENST00000438672 CFTRP13569 1480 aa29.95■■■□□ 2.39
EFEMP1-206ENST00000438672 MRC2Q9UBG0 1479 aa29.95■■■□□ 2.39
EFEMP1-206ENST00000438672 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
EFEMP1-206ENST00000438672 CEP164Q9UPV0 1460 aa29.9■■■□□ 2.38
EFEMP1-206ENST00000438672 WDR62O43379 1518 aa29.89■■■□□ 2.38
EFEMP1-206ENST00000438672 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
EFEMP1-206ENST00000438672 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
EFEMP1-206ENST00000438672 URB2Q14146 1524 aaKnown RBP29.65■■■□□ 2.34
EFEMP1-206ENST00000438672 SUPT5HO00267 1087 aaKnown RBP29.64■■■□□ 2.34
EFEMP1-206ENST00000438672 TOPBP1Q92547 1522 aa29.38■■■□□ 2.29
EFEMP1-206ENST00000438672 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
EFEMP1-206ENST00000438672 IFT140Q96RY7 1462 aa29.29■■■□□ 2.28
EFEMP1-206ENST00000438672 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
EFEMP1-206ENST00000438672 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
EFEMP1-206ENST00000438672 EIF4G3O43432 1585 aaKnown RBP29.11■■■□□ 2.25
EFEMP1-206ENST00000438672 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
EFEMP1-206ENST00000438672 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
EFEMP1-206ENST00000438672 OSCARQ8IYS5 282 aa29.04■■■□□ 2.24
EFEMP1-206ENST00000438672 CUX1P39880 1505 aa29■■■□□ 2.23
EFEMP1-206ENST00000438672 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.23
EFEMP1-206ENST00000438672 RAD54L2Q9Y4B4 1467 aa28.98■■■□□ 2.23
EFEMP1-206ENST00000438672 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
EFEMP1-206ENST00000438672 SOGA1O94964 1423 aa28.93■■■□□ 2.22
EFEMP1-206ENST00000438672 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
EFEMP1-206ENST00000438672 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
EFEMP1-206ENST00000438672 CHD1O14646 1710 aa28.83■■■□□ 2.21
EFEMP1-206ENST00000438672 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
EFEMP1-206ENST00000438672 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
EFEMP1-206ENST00000438672 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
EFEMP1-206ENST00000438672 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
EFEMP1-206ENST00000438672 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
EFEMP1-206ENST00000438672 FBLN2P98095 1184 aa28.69■■■□□ 2.18
EFEMP1-206ENST00000438672 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
EFEMP1-206ENST00000438672 ARHGEF11O15085 1522 aa28.66■■■□□ 2.18
EFEMP1-206ENST00000438672 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
EFEMP1-206ENST00000438672 MAGI1Q96QZ7 1491 aaPredicted RBP28.64■■■□□ 2.17
EFEMP1-206ENST00000438672 BIVM-ERCC5R4GMW8 1640 aa28.63■■■□□ 2.17
EFEMP1-206ENST00000438672 PBRM1Q86U86 1689 aa28.63■■■□□ 2.17
EFEMP1-206ENST00000438672 TOP2BQ02880 1626 aa28.62■■■□□ 2.17
EFEMP1-206ENST00000438672 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.17
EFEMP1-206ENST00000438672 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
EFEMP1-206ENST00000438672 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
EFEMP1-206ENST00000438672 GAPVD1Q14C86 1478 aa28.6■■■□□ 2.17
EFEMP1-206ENST00000438672 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
EFEMP1-206ENST00000438672 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
EFEMP1-206ENST00000438672 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
EFEMP1-206ENST00000438672 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
EFEMP1-206ENST00000438672 ADAMTS12P58397 1594 aa28.37■■■□□ 2.13
EFEMP1-206ENST00000438672 CYB5RLQ6IPT4 315 aa28.35■■■□□ 2.13
EFEMP1-206ENST00000438672 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
EFEMP1-206ENST00000438672 ERICH3Q5RHP9 1530 aa28.29■■■□□ 2.12
EFEMP1-206ENST00000438672 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
EFEMP1-206ENST00000438672 CEP170Q5SW79 1584 aa28.22■■■□□ 2.11
EFEMP1-206ENST00000438672 NUP160Q12769 1436 aa28.2■■■□□ 2.11
EFEMP1-206ENST00000438672 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
EFEMP1-206ENST00000438672 SHROOM2Q13796 1616 aa28.06■■■□□ 2.08
EFEMP1-206ENST00000438672 KIF27Q86VH2 1401 aa28.04■■■□□ 2.08
EFEMP1-206ENST00000438672 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
EFEMP1-206ENST00000438672 IGF1RP08069 1367 aa27.97■■■□□ 2.07
EFEMP1-206ENST00000438672 CUL7Q14999 1698 aa27.96■■■□□ 2.07
EFEMP1-206ENST00000438672 TRHP20396 242 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms