RNA–Protein interactions for RNA: ENST00000438470.5

TNFSF13-207, Transcript of TNF superfamily member 13, humanhuman

TSL 3

Gene TNFSF13, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-207ENST00000438470 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
TNFSF13-207ENST00000438470 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
TNFSF13-207ENST00000438470 ABCC9O60706 1549 aa37.46■■■■□ 3.59
TNFSF13-207ENST00000438470 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
TNFSF13-207ENST00000438470 NACADO15069 1562 aa35.5■■■■□ 3.27
TNFSF13-207ENST00000438470 DCAF8L2P0C7V8 631 aa35.19■■■■□ 3.22
TNFSF13-207ENST00000438470 UNC13AQ9UPW8 1703 aa35.05■■■■□ 3.2
TNFSF13-207ENST00000438470 MYO15BQ96JP2 1530 aa35.03■■■■□ 3.2
TNFSF13-207ENST00000438470 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
TNFSF13-207ENST00000438470 PABPN1Q86U42 306 aaKnown RBP eCLIP34.81■■■■□ 3.16
TNFSF13-207ENST00000438470 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
TNFSF13-207ENST00000438470 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.15
TNFSF13-207ENST00000438470 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
TNFSF13-207ENST00000438470 SCRIBQ14160 1630 aa34.29■■■■□ 3.08
TNFSF13-207ENST00000438470 SHROOM4Q9ULL8 1493 aa34.22■■■■□ 3.07
TNFSF13-207ENST00000438470 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
TNFSF13-207ENST00000438470 EIF4G1Q04637 1599 aaKnown RBP33.84■■■■□ 3.01
TNFSF13-207ENST00000438470 CECR2Q9BXF3 1484 aa33.71■■■□□ 2.99
TNFSF13-207ENST00000438470 NCAPD3P42695 1498 aa32.73■■■□□ 2.83
TNFSF13-207ENST00000438470 SMARCA4P51532 1647 aa32.72■■■□□ 2.83
TNFSF13-207ENST00000438470 ATAD2BQ9ULI0 1458 aa32.66■■■□□ 2.82
TNFSF13-207ENST00000438470 SMARCA2P51531 1590 aa32.6■■■□□ 2.81
TNFSF13-207ENST00000438470 HMGXB3Q12766 1538 aa32.56■■■□□ 2.8
TNFSF13-207ENST00000438470 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
TNFSF13-207ENST00000438470 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
TNFSF13-207ENST00000438470 BAZ1BQ9UIG0 1483 aaKnown RBP32.36■■■□□ 2.77
TNFSF13-207ENST00000438470 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
TNFSF13-207ENST00000438470 MROH2BQ7Z745 1585 aa32.3■■■□□ 2.76
TNFSF13-207ENST00000438470 CUX2O14529 1486 aa32.23■■■□□ 2.75
TNFSF13-207ENST00000438470 NESP48681 1621 aa32.22■■■□□ 2.75
TNFSF13-207ENST00000438470 LAMC3Q9Y6N6 1575 aa32.03■■■□□ 2.72
TNFSF13-207ENST00000438470 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
TNFSF13-207ENST00000438470 WIZO95785 1651 aa31.96■■■□□ 2.71
TNFSF13-207ENST00000438470 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
TNFSF13-207ENST00000438470 KIF21AQ7Z4S6 1674 aa31.9■■■□□ 2.7
TNFSF13-207ENST00000438470 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
TNFSF13-207ENST00000438470 CADPSQ9ULU8 1353 aa31.71■■■□□ 2.67
TNFSF13-207ENST00000438470 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
TNFSF13-207ENST00000438470 TOP2AP11388 1531 aaKnown RBP31.54■■■□□ 2.64
TNFSF13-207ENST00000438470 MRC2Q9UBG0 1479 aa31.54■■■□□ 2.64
TNFSF13-207ENST00000438470 WDR62O43379 1518 aa31.49■■■□□ 2.63
TNFSF13-207ENST00000438470 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
TNFSF13-207ENST00000438470 CFTRP13569 1480 aa31.41■■■□□ 2.62
TNFSF13-207ENST00000438470 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
TNFSF13-207ENST00000438470 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
TNFSF13-207ENST00000438470 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
TNFSF13-207ENST00000438470 CCDC88BA6NC98 1476 aa31.13■■■□□ 2.57
TNFSF13-207ENST00000438470 TOPBP1Q92547 1522 aa30.83■■■□□ 2.53
TNFSF13-207ENST00000438470 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
TNFSF13-207ENST00000438470 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
TNFSF13-207ENST00000438470 ZNF608Q9ULD9 1512 aaPredicted RBP30.74■■■□□ 2.51
TNFSF13-207ENST00000438470 ABCC8Q09428 1581 aa30.74■■■□□ 2.51
TNFSF13-207ENST00000438470 OSCARQ8IYS5 282 aa30.68■■■□□ 2.5
TNFSF13-207ENST00000438470 TRIM41Q8WV44 630 aa30.67■■■□□ 2.5
TNFSF13-207ENST00000438470 EIF4G3O43432 1585 aaKnown RBP30.65■■■□□ 2.5
TNFSF13-207ENST00000438470 TARBP1Q13395 1621 aaKnown RBP30.59■■■□□ 2.49
TNFSF13-207ENST00000438470 POLA1P09884 1462 aaPredicted RBP30.52■■■□□ 2.48
TNFSF13-207ENST00000438470 CHD1O14646 1710 aa30.44■■■□□ 2.46
TNFSF13-207ENST00000438470 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
TNFSF13-207ENST00000438470 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
TNFSF13-207ENST00000438470 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
TNFSF13-207ENST00000438470 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
TNFSF13-207ENST00000438470 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
TNFSF13-207ENST00000438470 CUX1P39880 1505 aa30.36■■■□□ 2.45
TNFSF13-207ENST00000438470 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
TNFSF13-207ENST00000438470 SOGA1O94964 1423 aa30.32■■■□□ 2.44
TNFSF13-207ENST00000438470 ARHGEF11O15085 1522 aa30.31■■■□□ 2.44
TNFSF13-207ENST00000438470 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
TNFSF13-207ENST00000438470 TDRD9Q8NDG6 1382 aaKnown RBP30.25■■■□□ 2.43
TNFSF13-207ENST00000438470 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
TNFSF13-207ENST00000438470 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
TNFSF13-207ENST00000438470 FBLN2P98095 1184 aa30.16■■■□□ 2.42
TNFSF13-207ENST00000438470 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
TNFSF13-207ENST00000438470 MAGI1Q96QZ7 1491 aaPredicted RBP30.1■■■□□ 2.41
TNFSF13-207ENST00000438470 GRIN2BQ13224 1484 aa30.08■■■□□ 2.41
TNFSF13-207ENST00000438470 CLASP1Q7Z460 1538 aa30.03■■■□□ 2.4
TNFSF13-207ENST00000438470 ARAP1Q96P48 1450 aa30.02■■■□□ 2.4
TNFSF13-207ENST00000438470 ABCA5Q8WWZ7 1642 aa30.01■■■□□ 2.39
TNFSF13-207ENST00000438470 SYNJ1O43426 1573 aa30.01■■■□□ 2.39
TNFSF13-207ENST00000438470 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
TNFSF13-207ENST00000438470 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
TNFSF13-207ENST00000438470 SYNJ2O15056 1496 aa29.99■■■□□ 2.39
TNFSF13-207ENST00000438470 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
TNFSF13-207ENST00000438470 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
TNFSF13-207ENST00000438470 BIVM-ERCC5R4GMW8 1640 aa29.95■■■□□ 2.38
TNFSF13-207ENST00000438470 TOP2BQ02880 1626 aa29.91■■■□□ 2.38
TNFSF13-207ENST00000438470 WRNQ14191 1432 aaPredicted RBP eCLIP29.87■■■□□ 2.37
TNFSF13-207ENST00000438470 ADAMTS12P58397 1594 aa29.78■■■□□ 2.36
TNFSF13-207ENST00000438470 GRIN2AQ12879 1464 aa29.73■■■□□ 2.35
TNFSF13-207ENST00000438470 CEP170Q5SW79 1584 aa29.65■■■□□ 2.34
TNFSF13-207ENST00000438470 ERICH3Q5RHP9 1530 aa29.64■■■□□ 2.34
TNFSF13-207ENST00000438470 TRHP20396 242 aaPredicted RBP29.61■■■□□ 2.33
TNFSF13-207ENST00000438470 FHAD1B1AJZ9 1412 aa29.61■■■□□ 2.33
TNFSF13-207ENST00000438470 NUP160Q12769 1436 aa29.61■■■□□ 2.33
TNFSF13-207ENST00000438470 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
TNFSF13-207ENST00000438470 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
TNFSF13-207ENST00000438470 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
TNFSF13-207ENST00000438470 PRG4Q92954 1404 aaPredicted RBP29.28■■■□□ 2.28
TNFSF13-207ENST00000438470 CUL7Q14999 1698 aa29.28■■■□□ 2.28
TNFSF13-207ENST00000438470 KIF27Q86VH2 1401 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms