RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
LINC00475-207ENST00000438322 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
LINC00475-207ENST00000438322 ABCC9O60706 1549 aa22.98■■□□□ 1.27
LINC00475-207ENST00000438322 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
LINC00475-207ENST00000438322 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
LINC00475-207ENST00000438322 NACADO15069 1562 aa21.72■■□□□ 1.07
LINC00475-207ENST00000438322 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
LINC00475-207ENST00000438322 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
LINC00475-207ENST00000438322 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
LINC00475-207ENST00000438322 MYO15BQ96JP2 1530 aa21.37■■□□□ 1.01
LINC00475-207ENST00000438322 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
LINC00475-207ENST00000438322 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
LINC00475-207ENST00000438322 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
LINC00475-207ENST00000438322 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
LINC00475-207ENST00000438322 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.93
LINC00475-207ENST00000438322 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
LINC00475-207ENST00000438322 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
LINC00475-207ENST00000438322 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
LINC00475-207ENST00000438322 SMARCA4P51532 1647 aa20.12■□□□□ 0.81
LINC00475-207ENST00000438322 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
LINC00475-207ENST00000438322 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
LINC00475-207ENST00000438322 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
LINC00475-207ENST00000438322 NCAPD3P42695 1498 aa20■□□□□ 0.79
LINC00475-207ENST00000438322 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
LINC00475-207ENST00000438322 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
LINC00475-207ENST00000438322 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
LINC00475-207ENST00000438322 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
LINC00475-207ENST00000438322 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
LINC00475-207ENST00000438322 NESP48681 1621 aa19.78■□□□□ 0.76
LINC00475-207ENST00000438322 WIZO95785 1651 aa19.75■□□□□ 0.75
LINC00475-207ENST00000438322 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
LINC00475-207ENST00000438322 CUX2O14529 1486 aa19.6■□□□□ 0.73
LINC00475-207ENST00000438322 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
LINC00475-207ENST00000438322 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
LINC00475-207ENST00000438322 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
LINC00475-207ENST00000438322 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
LINC00475-207ENST00000438322 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
LINC00475-207ENST00000438322 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
LINC00475-207ENST00000438322 DNAJC5Q9H3Z4 198 aa19.35■□□□□ 0.69
LINC00475-207ENST00000438322 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
LINC00475-207ENST00000438322 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
LINC00475-207ENST00000438322 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
LINC00475-207ENST00000438322 CFTRP13569 1480 aa19.25■□□□□ 0.67
LINC00475-207ENST00000438322 WDR62O43379 1518 aa19.24■□□□□ 0.67
LINC00475-207ENST00000438322 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
LINC00475-207ENST00000438322 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
LINC00475-207ENST00000438322 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
LINC00475-207ENST00000438322 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
LINC00475-207ENST00000438322 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
LINC00475-207ENST00000438322 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.62
LINC00475-207ENST00000438322 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
LINC00475-207ENST00000438322 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
LINC00475-207ENST00000438322 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
LINC00475-207ENST00000438322 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
LINC00475-207ENST00000438322 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
LINC00475-207ENST00000438322 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
LINC00475-207ENST00000438322 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
LINC00475-207ENST00000438322 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
LINC00475-207ENST00000438322 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC00475-207ENST00000438322 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
LINC00475-207ENST00000438322 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
LINC00475-207ENST00000438322 CUX1P39880 1505 aa18.69■□□□□ 0.58
LINC00475-207ENST00000438322 CHD1O14646 1710 aa18.69■□□□□ 0.58
LINC00475-207ENST00000438322 SOGA1O94964 1423 aa18.67■□□□□ 0.58
LINC00475-207ENST00000438322 FBLN2P98095 1184 aa18.66■□□□□ 0.58
LINC00475-207ENST00000438322 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
LINC00475-207ENST00000438322 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
LINC00475-207ENST00000438322 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
LINC00475-207ENST00000438322 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
LINC00475-207ENST00000438322 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
LINC00475-207ENST00000438322 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
LINC00475-207ENST00000438322 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
LINC00475-207ENST00000438322 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
LINC00475-207ENST00000438322 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
LINC00475-207ENST00000438322 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
LINC00475-207ENST00000438322 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
LINC00475-207ENST00000438322 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
LINC00475-207ENST00000438322 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.54
LINC00475-207ENST00000438322 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
LINC00475-207ENST00000438322 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
LINC00475-207ENST00000438322 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
LINC00475-207ENST00000438322 ABCA5Q8WWZ7 1642 aa18.43■□□□□ 0.54
LINC00475-207ENST00000438322 ABCA10Q8WWZ4 1543 aa18.43■□□□□ 0.54
LINC00475-207ENST00000438322 SYNJ2O15056 1496 aa18.39■□□□□ 0.54
LINC00475-207ENST00000438322 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
LINC00475-207ENST00000438322 CLASP1Q7Z460 1538 aa18.34■□□□□ 0.53
LINC00475-207ENST00000438322 ARAP1Q96P48 1450 aa18.33■□□□□ 0.53
LINC00475-207ENST00000438322 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
LINC00475-207ENST00000438322 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
LINC00475-207ENST00000438322 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
LINC00475-207ENST00000438322 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
LINC00475-207ENST00000438322 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
LINC00475-207ENST00000438322 TRHP20396 242 aaPredicted RBP18.19■□□□□ 0.5
LINC00475-207ENST00000438322 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
LINC00475-207ENST00000438322 NUP160Q12769 1436 aa18.13■□□□□ 0.49
LINC00475-207ENST00000438322 KIF27Q86VH2 1401 aa18.08■□□□□ 0.49
LINC00475-207ENST00000438322 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
LINC00475-207ENST00000438322 CUL7Q14999 1698 aa18.05■□□□□ 0.48
LINC00475-207ENST00000438322 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
LINC00475-207ENST00000438322 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms