RNA–Protein interactions for RNA: ENST00000438304.1

FDPSP8-201, Transcript of farnesyl diphosphate synthase pseudogene 8, humanhuman

BASIC

Gene FDPSP8, Length 1,089 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP8-201ENST00000438304 NISCHQ9Y2I1 1504 aa20.64■□□□□ 0.9
FDPSP8-201ENST00000438304 ABCC9O60706 1549 aa19.71■□□□□ 0.75
FDPSP8-201ENST00000438304 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
FDPSP8-201ENST00000438304 CCDC180Q9P1Z9 1646 aa18.75■□□□□ 0.59
FDPSP8-201ENST00000438304 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
FDPSP8-201ENST00000438304 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
FDPSP8-201ENST00000438304 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
FDPSP8-201ENST00000438304 NACADO15069 1562 aa17.95■□□□□ 0.46
FDPSP8-201ENST00000438304 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
FDPSP8-201ENST00000438304 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
FDPSP8-201ENST00000438304 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
FDPSP8-201ENST00000438304 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
FDPSP8-201ENST00000438304 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
FDPSP8-201ENST00000438304 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
FDPSP8-201ENST00000438304 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
FDPSP8-201ENST00000438304 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
FDPSP8-201ENST00000438304 CUX2O14529 1486 aa17.2■□□□□ 0.34
FDPSP8-201ENST00000438304 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
FDPSP8-201ENST00000438304 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
FDPSP8-201ENST00000438304 ERCC6Q03468 1493 aa17■□□□□ 0.31
FDPSP8-201ENST00000438304 ZCCHC6Q5VYS8 1495 aaKnown RBP16.94■□□□□ 0.3
FDPSP8-201ENST00000438304 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
FDPSP8-201ENST00000438304 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
FDPSP8-201ENST00000438304 NESP48681 1621 aa16.74■□□□□ 0.27
FDPSP8-201ENST00000438304 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
FDPSP8-201ENST00000438304 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
FDPSP8-201ENST00000438304 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
FDPSP8-201ENST00000438304 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
FDPSP8-201ENST00000438304 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
FDPSP8-201ENST00000438304 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
FDPSP8-201ENST00000438304 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
FDPSP8-201ENST00000438304 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
FDPSP8-201ENST00000438304 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.2
FDPSP8-201ENST00000438304 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
FDPSP8-201ENST00000438304 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
FDPSP8-201ENST00000438304 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
FDPSP8-201ENST00000438304 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
FDPSP8-201ENST00000438304 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
FDPSP8-201ENST00000438304 WDR62O43379 1518 aa16.22■□□□□ 0.19
FDPSP8-201ENST00000438304 RIMBP3CA6NJZ7 1639 aa16.22■□□□□ 0.19
FDPSP8-201ENST00000438304 RIMBP3BA6NNM3 1639 aa16.22■□□□□ 0.19
FDPSP8-201ENST00000438304 RIMBP3Q9UFD9 1639 aa16.22■□□□□ 0.19
FDPSP8-201ENST00000438304 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
FDPSP8-201ENST00000438304 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
FDPSP8-201ENST00000438304 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
FDPSP8-201ENST00000438304 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
FDPSP8-201ENST00000438304 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
FDPSP8-201ENST00000438304 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
FDPSP8-201ENST00000438304 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
FDPSP8-201ENST00000438304 FANCD2Q9BXW9 1451 aa15.94■□□□□ 0.14
FDPSP8-201ENST00000438304 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
FDPSP8-201ENST00000438304 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
FDPSP8-201ENST00000438304 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
FDPSP8-201ENST00000438304 CFTRP13569 1480 aa15.76■□□□□ 0.11
FDPSP8-201ENST00000438304 ILDR1Q86SU0 546 aaPredicted RBP15.71■□□□□ 0.11
FDPSP8-201ENST00000438304 IFT140Q96RY7 1462 aa15.71■□□□□ 0.1
FDPSP8-201ENST00000438304 WIZO95785 1651 aa15.7■□□□□ 0.1
FDPSP8-201ENST00000438304 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
FDPSP8-201ENST00000438304 CHD1O14646 1710 aa15.66■□□□□ 0.1
FDPSP8-201ENST00000438304 FBLN2P98095 1184 aa15.65■□□□□ 0.1
FDPSP8-201ENST00000438304 EIF4G3O43432 1585 aaKnown RBP15.65■□□□□ 0.1
FDPSP8-201ENST00000438304 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.09
FDPSP8-201ENST00000438304 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
FDPSP8-201ENST00000438304 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
FDPSP8-201ENST00000438304 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.07
FDPSP8-201ENST00000438304 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
FDPSP8-201ENST00000438304 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
FDPSP8-201ENST00000438304 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
FDPSP8-201ENST00000438304 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
FDPSP8-201ENST00000438304 PRDM2Q13029 1718 aa15.39■□□□□ 0.05
FDPSP8-201ENST00000438304 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
FDPSP8-201ENST00000438304 KDM4FA0A1W2PPD8 638 aa15.37■□□□□ 0.05
FDPSP8-201ENST00000438304 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
FDPSP8-201ENST00000438304 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
FDPSP8-201ENST00000438304 CHMP7Q8WUX9 453 aaPredicted RBP15.35■□□□□ 0.05
FDPSP8-201ENST00000438304 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
FDPSP8-201ENST00000438304 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
FDPSP8-201ENST00000438304 ERCC6L2Q5T890 1561 aa15.29■□□□□ 0.04
FDPSP8-201ENST00000438304 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
FDPSP8-201ENST00000438304 SOGA1O94964 1423 aa15.26■□□□□ 0.03
FDPSP8-201ENST00000438304 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
FDPSP8-201ENST00000438304 SYNJ2O15056 1496 aa15.23■□□□□ 0.03
FDPSP8-201ENST00000438304 KIF13AQ9H1H9 1805 aa15.22■□□□□ 0.03
FDPSP8-201ENST00000438304 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
FDPSP8-201ENST00000438304 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
FDPSP8-201ENST00000438304 FAM69CQ0P6D2 419 aa15.12■□□□□ 0.01
FDPSP8-201ENST00000438304 WDR97A6NE52 1622 aa15.12■□□□□ 0.01
FDPSP8-201ENST00000438304 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
FDPSP8-201ENST00000438304 ABCC10Q5T3U5 1492 aa15.07■□□□□ 0
FDPSP8-201ENST00000438304 KDM6BO15054 1643 aa15.06■□□□□ 0
FDPSP8-201ENST00000438304 HECW2Q9P2P5 1572 aa15.05■□□□□ -0
FDPSP8-201ENST00000438304 PBRM1Q86U86 1689 aa15.03■□□□□ -0
FDPSP8-201ENST00000438304 CUX1P39880 1505 aa15.02■□□□□ -0
FDPSP8-201ENST00000438304 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
FDPSP8-201ENST00000438304 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
FDPSP8-201ENST00000438304 DIP2BQ9P265 1576 aa15□□□□□ -0.01
FDPSP8-201ENST00000438304 NUP160Q12769 1436 aa15□□□□□ -0.01
FDPSP8-201ENST00000438304 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
FDPSP8-201ENST00000438304 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
FDPSP8-201ENST00000438304 MAPKBP1O60336 1514 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms