RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
RPE-211ENST00000438265 ABCC9O60706 1549 aa18.78■□□□□ 0.6
RPE-211ENST00000438265 CCDC180Q9P1Z9 1646 aa18.78■□□□□ 0.6
RPE-211ENST00000438265 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
RPE-211ENST00000438265 UNC13AQ9UPW8 1703 aa17.73■□□□□ 0.43
RPE-211ENST00000438265 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
RPE-211ENST00000438265 NACADO15069 1562 aa17.66■□□□□ 0.42
RPE-211ENST00000438265 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
RPE-211ENST00000438265 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
RPE-211ENST00000438265 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
RPE-211ENST00000438265 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
RPE-211ENST00000438265 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
RPE-211ENST00000438265 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
RPE-211ENST00000438265 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
RPE-211ENST00000438265 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
RPE-211ENST00000438265 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
RPE-211ENST00000438265 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
RPE-211ENST00000438265 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
RPE-211ENST00000438265 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
RPE-211ENST00000438265 NCAPD3P42695 1498 aa16.3■□□□□ 0.2
RPE-211ENST00000438265 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
RPE-211ENST00000438265 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
RPE-211ENST00000438265 NESP48681 1621 aa16.21■□□□□ 0.19
RPE-211ENST00000438265 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
RPE-211ENST00000438265 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
RPE-211ENST00000438265 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
RPE-211ENST00000438265 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
RPE-211ENST00000438265 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
RPE-211ENST00000438265 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
RPE-211ENST00000438265 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
RPE-211ENST00000438265 CUX2O14529 1486 aa16.09■□□□□ 0.17
RPE-211ENST00000438265 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
RPE-211ENST00000438265 THOC2Q8NI27 1593 aaKnown RBP16.06■□□□□ 0.16
RPE-211ENST00000438265 WIZO95785 1651 aa16.03■□□□□ 0.16
RPE-211ENST00000438265 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
RPE-211ENST00000438265 CADPSQ9ULU8 1353 aa15.77■□□□□ 0.12
RPE-211ENST00000438265 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
RPE-211ENST00000438265 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
RPE-211ENST00000438265 WDR62O43379 1518 aa15.73■□□□□ 0.11
RPE-211ENST00000438265 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
RPE-211ENST00000438265 TOP2AP11388 1531 aaKnown RBP15.69■□□□□ 0.1
RPE-211ENST00000438265 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
RPE-211ENST00000438265 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
RPE-211ENST00000438265 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
RPE-211ENST00000438265 CFTRP13569 1480 aa15.64■□□□□ 0.09
RPE-211ENST00000438265 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
RPE-211ENST00000438265 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
RPE-211ENST00000438265 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
RPE-211ENST00000438265 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
RPE-211ENST00000438265 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
RPE-211ENST00000438265 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
RPE-211ENST00000438265 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
RPE-211ENST00000438265 CHD1O14646 1710 aa15.33■□□□□ 0.04
RPE-211ENST00000438265 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
RPE-211ENST00000438265 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
RPE-211ENST00000438265 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
RPE-211ENST00000438265 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
RPE-211ENST00000438265 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
RPE-211ENST00000438265 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
RPE-211ENST00000438265 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.032e-6■■□□□ 13.2
RPE-211ENST00000438265 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
RPE-211ENST00000438265 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
RPE-211ENST00000438265 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
RPE-211ENST00000438265 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
RPE-211ENST00000438265 CUX1P39880 1505 aa15.18■□□□□ 0.02
RPE-211ENST00000438265 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
RPE-211ENST00000438265 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
RPE-211ENST00000438265 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
RPE-211ENST00000438265 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
RPE-211ENST00000438265 SOGA1O94964 1423 aa15.09■□□□□ 0.01
RPE-211ENST00000438265 ARAP1Q96P48 1450 aa15.08■□□□□ 0
RPE-211ENST00000438265 SNAPC4Q5SXM2 1469 aa15.07■□□□□ 0
RPE-211ENST00000438265 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
RPE-211ENST00000438265 ABCA5Q8WWZ7 1642 aa15□□□□□ -0.01
RPE-211ENST00000438265 FBLN2P98095 1184 aa15□□□□□ -0.01
RPE-211ENST00000438265 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
RPE-211ENST00000438265 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.01
RPE-211ENST00000438265 BIVM-ERCC5R4GMW8 1640 aa14.95□□□□□ -0.02
RPE-211ENST00000438265 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
RPE-211ENST00000438265 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
RPE-211ENST00000438265 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
RPE-211ENST00000438265 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
RPE-211ENST00000438265 GAPVD1Q14C86 1478 aa14.92□□□□□ -0.02
RPE-211ENST00000438265 ERCC6L2Q5T890 1561 aa14.91□□□□□ -0.02
RPE-211ENST00000438265 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
RPE-211ENST00000438265 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
RPE-211ENST00000438265 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
RPE-211ENST00000438265 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
RPE-211ENST00000438265 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
RPE-211ENST00000438265 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
RPE-211ENST00000438265 SHROOM2Q13796 1616 aa14.79□□□□□ -0.04
RPE-211ENST00000438265 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
RPE-211ENST00000438265 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
RPE-211ENST00000438265 NUP160Q12769 1436 aa14.76□□□□□ -0.05
RPE-211ENST00000438265 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.05
RPE-211ENST00000438265 KIF13AQ9H1H9 1805 aa14.71□□□□□ -0.05
RPE-211ENST00000438265 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
RPE-211ENST00000438265 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
RPE-211ENST00000438265 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.07
RPE-211ENST00000438265 ADCY10Q96PN6 1610 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms