RNA–Protein interactions for RNA: ENST00000437690.1

CHCHD4P4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 4, humanhuman

BASIC

Gene CHCHD4P4, Length 327 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P4-201ENST00000437690 NISCHQ9Y2I1 1504 aa29.14■■■□□ 2.25
CHCHD4P4-201ENST00000437690 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
CHCHD4P4-201ENST00000437690 ABCC9O60706 1549 aa25.53■■□□□ 1.68
CHCHD4P4-201ENST00000437690 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
CHCHD4P4-201ENST00000437690 NACADO15069 1562 aa24.42■■□□□ 1.5
CHCHD4P4-201ENST00000437690 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
CHCHD4P4-201ENST00000437690 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
CHCHD4P4-201ENST00000437690 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
CHCHD4P4-201ENST00000437690 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
CHCHD4P4-201ENST00000437690 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
CHCHD4P4-201ENST00000437690 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
CHCHD4P4-201ENST00000437690 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
CHCHD4P4-201ENST00000437690 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
CHCHD4P4-201ENST00000437690 SCRIBQ14160 1630 aa23.64■■□□□ 1.38
CHCHD4P4-201ENST00000437690 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
CHCHD4P4-201ENST00000437690 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
CHCHD4P4-201ENST00000437690 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.29
CHCHD4P4-201ENST00000437690 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
CHCHD4P4-201ENST00000437690 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
CHCHD4P4-201ENST00000437690 NCAPD3P42695 1498 aa22.58■■□□□ 1.2
CHCHD4P4-201ENST00000437690 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
CHCHD4P4-201ENST00000437690 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
CHCHD4P4-201ENST00000437690 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
CHCHD4P4-201ENST00000437690 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
CHCHD4P4-201ENST00000437690 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
CHCHD4P4-201ENST00000437690 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
CHCHD4P4-201ENST00000437690 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
CHCHD4P4-201ENST00000437690 WIZO95785 1651 aa22.19■■□□□ 1.14
CHCHD4P4-201ENST00000437690 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
CHCHD4P4-201ENST00000437690 NESP48681 1621 aa22.08■■□□□ 1.13
CHCHD4P4-201ENST00000437690 LAMC3Q9Y6N6 1575 aa21.96■■□□□ 1.11
CHCHD4P4-201ENST00000437690 ERCC6Q03468 1493 aa21.95■■□□□ 1.1
CHCHD4P4-201ENST00000437690 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
CHCHD4P4-201ENST00000437690 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
CHCHD4P4-201ENST00000437690 CUX2O14529 1486 aa21.83■■□□□ 1.08
CHCHD4P4-201ENST00000437690 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
CHCHD4P4-201ENST00000437690 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
CHCHD4P4-201ENST00000437690 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
CHCHD4P4-201ENST00000437690 CFTRP13569 1480 aa21.75■■□□□ 1.07
CHCHD4P4-201ENST00000437690 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
CHCHD4P4-201ENST00000437690 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
CHCHD4P4-201ENST00000437690 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
CHCHD4P4-201ENST00000437690 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
CHCHD4P4-201ENST00000437690 WDR62O43379 1518 aa21.56■■□□□ 1.04
CHCHD4P4-201ENST00000437690 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
CHCHD4P4-201ENST00000437690 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
CHCHD4P4-201ENST00000437690 SUPT5HO00267 1087 aaKnown RBP21.37■■□□□ 1.01
CHCHD4P4-201ENST00000437690 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
CHCHD4P4-201ENST00000437690 TOPBP1Q92547 1522 aa21.27■■□□□ 1
CHCHD4P4-201ENST00000437690 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
CHCHD4P4-201ENST00000437690 DNMBPQ6XZF7 1577 aa21.22■□□□□ 0.99
CHCHD4P4-201ENST00000437690 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
CHCHD4P4-201ENST00000437690 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
CHCHD4P4-201ENST00000437690 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
CHCHD4P4-201ENST00000437690 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
CHCHD4P4-201ENST00000437690 CUX1P39880 1505 aa21.08■□□□□ 0.96
CHCHD4P4-201ENST00000437690 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
CHCHD4P4-201ENST00000437690 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
CHCHD4P4-201ENST00000437690 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
CHCHD4P4-201ENST00000437690 SOGA1O94964 1423 aa20.96■□□□□ 0.95
CHCHD4P4-201ENST00000437690 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
CHCHD4P4-201ENST00000437690 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
CHCHD4P4-201ENST00000437690 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
CHCHD4P4-201ENST00000437690 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
CHCHD4P4-201ENST00000437690 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
CHCHD4P4-201ENST00000437690 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
CHCHD4P4-201ENST00000437690 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
CHCHD4P4-201ENST00000437690 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
CHCHD4P4-201ENST00000437690 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
CHCHD4P4-201ENST00000437690 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
CHCHD4P4-201ENST00000437690 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
CHCHD4P4-201ENST00000437690 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
CHCHD4P4-201ENST00000437690 CHD1O14646 1710 aa20.73■□□□□ 0.91
CHCHD4P4-201ENST00000437690 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
CHCHD4P4-201ENST00000437690 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
CHCHD4P4-201ENST00000437690 PBRM1Q86U86 1689 aa20.68■□□□□ 0.9
CHCHD4P4-201ENST00000437690 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
CHCHD4P4-201ENST00000437690 FBLN2P98095 1184 aa20.63■□□□□ 0.89
CHCHD4P4-201ENST00000437690 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
CHCHD4P4-201ENST00000437690 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
CHCHD4P4-201ENST00000437690 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
CHCHD4P4-201ENST00000437690 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
CHCHD4P4-201ENST00000437690 ARHGEF11O15085 1522 aa20.57■□□□□ 0.88
CHCHD4P4-201ENST00000437690 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
CHCHD4P4-201ENST00000437690 ADAMTS12P58397 1594 aa20.54■□□□□ 0.88
CHCHD4P4-201ENST00000437690 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
CHCHD4P4-201ENST00000437690 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
CHCHD4P4-201ENST00000437690 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
CHCHD4P4-201ENST00000437690 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
CHCHD4P4-201ENST00000437690 NUP160Q12769 1436 aa20.44■□□□□ 0.86
CHCHD4P4-201ENST00000437690 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
CHCHD4P4-201ENST00000437690 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
CHCHD4P4-201ENST00000437690 IGF1RP08069 1367 aa20.4■□□□□ 0.86
CHCHD4P4-201ENST00000437690 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
CHCHD4P4-201ENST00000437690 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
CHCHD4P4-201ENST00000437690 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
CHCHD4P4-201ENST00000437690 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
CHCHD4P4-201ENST00000437690 CUL7Q14999 1698 aa20.29■□□□□ 0.84
CHCHD4P4-201ENST00000437690 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
CHCHD4P4-201ENST00000437690 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms