RNA–Protein interactions for RNA: ENST00000437659.1

C2orf40-203, Transcript of chromosome 2 open reading frame 40, humanhuman

TSL 3

Gene C2orf40, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf40-203ENST00000437659 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
C2orf40-203ENST00000437659 ABCC9O60706 1549 aa28.3■■■□□ 2.12
C2orf40-203ENST00000437659 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
C2orf40-203ENST00000437659 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
C2orf40-203ENST00000437659 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
C2orf40-203ENST00000437659 NACADO15069 1562 aa26.53■■□□□ 1.84
C2orf40-203ENST00000437659 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
C2orf40-203ENST00000437659 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
C2orf40-203ENST00000437659 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
C2orf40-203ENST00000437659 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
C2orf40-203ENST00000437659 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
C2orf40-203ENST00000437659 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
C2orf40-203ENST00000437659 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
C2orf40-203ENST00000437659 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
C2orf40-203ENST00000437659 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
C2orf40-203ENST00000437659 CC2D2AQ9P2K1 1620 aa25.54■■□□□ 1.68
C2orf40-203ENST00000437659 CECR2Q9BXF3 1484 aa25.48■■□□□ 1.67
C2orf40-203ENST00000437659 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
C2orf40-203ENST00000437659 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
C2orf40-203ENST00000437659 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
C2orf40-203ENST00000437659 ERCC6Q03468 1493 aa24.42■■□□□ 1.5
C2orf40-203ENST00000437659 ATAD2BQ9ULI0 1458 aa24.42■■□□□ 1.5
C2orf40-203ENST00000437659 CUX2O14529 1486 aa24.39■■□□□ 1.5
C2orf40-203ENST00000437659 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
C2orf40-203ENST00000437659 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
C2orf40-203ENST00000437659 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
C2orf40-203ENST00000437659 NESP48681 1621 aa24.27■■□□□ 1.48
C2orf40-203ENST00000437659 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
C2orf40-203ENST00000437659 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
C2orf40-203ENST00000437659 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
C2orf40-203ENST00000437659 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
C2orf40-203ENST00000437659 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
C2orf40-203ENST00000437659 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
C2orf40-203ENST00000437659 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
C2orf40-203ENST00000437659 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
C2orf40-203ENST00000437659 WIZO95785 1651 aa23.76■■□□□ 1.39
C2orf40-203ENST00000437659 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
C2orf40-203ENST00000437659 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
C2orf40-203ENST00000437659 WDR62O43379 1518 aa23.63■■□□□ 1.37
C2orf40-203ENST00000437659 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
C2orf40-203ENST00000437659 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
C2orf40-203ENST00000437659 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
C2orf40-203ENST00000437659 CFTRP13569 1480 aa23.44■■□□□ 1.34
C2orf40-203ENST00000437659 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
C2orf40-203ENST00000437659 TOP2AP11388 1531 aaKnown RBP23.39■■□□□ 1.34
C2orf40-203ENST00000437659 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
C2orf40-203ENST00000437659 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
C2orf40-203ENST00000437659 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
C2orf40-203ENST00000437659 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
C2orf40-203ENST00000437659 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
C2orf40-203ENST00000437659 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
C2orf40-203ENST00000437659 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
C2orf40-203ENST00000437659 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
C2orf40-203ENST00000437659 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
C2orf40-203ENST00000437659 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
C2orf40-203ENST00000437659 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
C2orf40-203ENST00000437659 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
C2orf40-203ENST00000437659 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
C2orf40-203ENST00000437659 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
C2orf40-203ENST00000437659 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
C2orf40-203ENST00000437659 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
C2orf40-203ENST00000437659 CHD1O14646 1710 aa22.85■■□□□ 1.25
C2orf40-203ENST00000437659 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
C2orf40-203ENST00000437659 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
C2orf40-203ENST00000437659 FBLN2P98095 1184 aa22.76■■□□□ 1.23
C2orf40-203ENST00000437659 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
C2orf40-203ENST00000437659 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
C2orf40-203ENST00000437659 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
C2orf40-203ENST00000437659 SOGA1O94964 1423 aa22.68■■□□□ 1.22
C2orf40-203ENST00000437659 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
C2orf40-203ENST00000437659 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
C2orf40-203ENST00000437659 TRHP20396 242 aaPredicted RBP22.6■■□□□ 1.21
C2orf40-203ENST00000437659 CUX1P39880 1505 aa22.59■■□□□ 1.21
C2orf40-203ENST00000437659 CLASP1Q7Z460 1538 aa22.55■■□□□ 1.2
C2orf40-203ENST00000437659 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
C2orf40-203ENST00000437659 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
C2orf40-203ENST00000437659 MAGI1Q96QZ7 1491 aaPredicted RBP22.5■■□□□ 1.19
C2orf40-203ENST00000437659 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
C2orf40-203ENST00000437659 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
C2orf40-203ENST00000437659 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
C2orf40-203ENST00000437659 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
C2orf40-203ENST00000437659 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
C2orf40-203ENST00000437659 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
C2orf40-203ENST00000437659 ABCA10Q8WWZ4 1543 aa22.33■■□□□ 1.17
C2orf40-203ENST00000437659 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
C2orf40-203ENST00000437659 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
C2orf40-203ENST00000437659 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
C2orf40-203ENST00000437659 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
C2orf40-203ENST00000437659 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
C2orf40-203ENST00000437659 CEP170Q5SW79 1584 aa22.18■■□□□ 1.14
C2orf40-203ENST00000437659 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
C2orf40-203ENST00000437659 TOP2BQ02880 1626 aa22.15■■□□□ 1.14
C2orf40-203ENST00000437659 NUP160Q12769 1436 aa22.14■■□□□ 1.13
C2orf40-203ENST00000437659 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
C2orf40-203ENST00000437659 SHROOM2Q13796 1616 aa22.08■■□□□ 1.13
C2orf40-203ENST00000437659 AEBP2Q6ZN18 517 aaPredicted RBP22.07■■□□□ 1.12
C2orf40-203ENST00000437659 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
C2orf40-203ENST00000437659 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
C2orf40-203ENST00000437659 KIF13AQ9H1H9 1805 aa21.94■■□□□ 1.1
C2orf40-203ENST00000437659 JPH4Q96JJ6 628 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms