RNA–Protein interactions for RNA: ENST00000437597.1

LINC00884-201, long intergenic non-protein coding RNA 884, humanhuman

TSL 3

Gene LINC00884, Length 419 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-201ENST00000437597 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.77
LINC00884-201ENST00000437597 ABCC9O60706 1549 aa24.61■■□□□ 1.53
LINC00884-201ENST00000437597 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
LINC00884-201ENST00000437597 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
LINC00884-201ENST00000437597 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
LINC00884-201ENST00000437597 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
LINC00884-201ENST00000437597 NACADO15069 1562 aa22.7■■□□□ 1.22
LINC00884-201ENST00000437597 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
LINC00884-201ENST00000437597 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
LINC00884-201ENST00000437597 DNAJC5Q9H3Z4 198 aa22.48■■□□□ 1.19
LINC00884-201ENST00000437597 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
LINC00884-201ENST00000437597 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
LINC00884-201ENST00000437597 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
LINC00884-201ENST00000437597 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
LINC00884-201ENST00000437597 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
LINC00884-201ENST00000437597 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
LINC00884-201ENST00000437597 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
LINC00884-201ENST00000437597 CUX2O14529 1486 aa21.57■■□□□ 1.04
LINC00884-201ENST00000437597 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
LINC00884-201ENST00000437597 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
LINC00884-201ENST00000437597 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
LINC00884-201ENST00000437597 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
LINC00884-201ENST00000437597 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
LINC00884-201ENST00000437597 NESP48681 1621 aa20.93■□□□□ 0.94
LINC00884-201ENST00000437597 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
LINC00884-201ENST00000437597 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
LINC00884-201ENST00000437597 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
LINC00884-201ENST00000437597 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
LINC00884-201ENST00000437597 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.9
LINC00884-201ENST00000437597 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
LINC00884-201ENST00000437597 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
LINC00884-201ENST00000437597 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
LINC00884-201ENST00000437597 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
LINC00884-201ENST00000437597 PDS5BQ9NTI5 1447 aa20.5■□□□□ 0.87
LINC00884-201ENST00000437597 WDR62O43379 1518 aa20.42■□□□□ 0.86
LINC00884-201ENST00000437597 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
LINC00884-201ENST00000437597 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
LINC00884-201ENST00000437597 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
LINC00884-201ENST00000437597 RIMBP3CA6NJZ7 1639 aa20.29■□□□□ 0.84
LINC00884-201ENST00000437597 RIMBP3BA6NNM3 1639 aa20.29■□□□□ 0.84
LINC00884-201ENST00000437597 RIMBP3Q9UFD9 1639 aa20.29■□□□□ 0.84
LINC00884-201ENST00000437597 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
LINC00884-201ENST00000437597 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
LINC00884-201ENST00000437597 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
LINC00884-201ENST00000437597 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
LINC00884-201ENST00000437597 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
LINC00884-201ENST00000437597 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
LINC00884-201ENST00000437597 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
LINC00884-201ENST00000437597 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
LINC00884-201ENST00000437597 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
LINC00884-201ENST00000437597 CFTRP13569 1480 aa19.89■□□□□ 0.77
LINC00884-201ENST00000437597 ARAP1Q96P48 1450 aa19.89■□□□□ 0.77
LINC00884-201ENST00000437597 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
LINC00884-201ENST00000437597 WIZO95785 1651 aa19.85■□□□□ 0.77
LINC00884-201ENST00000437597 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
LINC00884-201ENST00000437597 CHD1O14646 1710 aa19.73■□□□□ 0.75
LINC00884-201ENST00000437597 EIF4G3O43432 1585 aaKnown RBP19.72■□□□□ 0.75
LINC00884-201ENST00000437597 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
LINC00884-201ENST00000437597 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
LINC00884-201ENST00000437597 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
LINC00884-201ENST00000437597 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
LINC00884-201ENST00000437597 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
LINC00884-201ENST00000437597 TARBP1Q13395 1621 aaKnown RBP19.52■□□□□ 0.72
LINC00884-201ENST00000437597 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
LINC00884-201ENST00000437597 FBLN2P98095 1184 aa19.5■□□□□ 0.71
LINC00884-201ENST00000437597 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
LINC00884-201ENST00000437597 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
LINC00884-201ENST00000437597 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
LINC00884-201ENST00000437597 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
LINC00884-201ENST00000437597 ILDR1Q86SU0 546 aaPredicted RBP19.33■□□□□ 0.68
LINC00884-201ENST00000437597 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.68
LINC00884-201ENST00000437597 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
LINC00884-201ENST00000437597 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
LINC00884-201ENST00000437597 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
LINC00884-201ENST00000437597 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
LINC00884-201ENST00000437597 MAGI1Q96QZ7 1491 aaPredicted RBP19.23■□□□□ 0.67
LINC00884-201ENST00000437597 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
LINC00884-201ENST00000437597 CHMP7Q8WUX9 453 aaPredicted RBP19.23■□□□□ 0.67
LINC00884-201ENST00000437597 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
LINC00884-201ENST00000437597 SOGA1O94964 1423 aa19.19■□□□□ 0.66
LINC00884-201ENST00000437597 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
LINC00884-201ENST00000437597 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
LINC00884-201ENST00000437597 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
LINC00884-201ENST00000437597 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
LINC00884-201ENST00000437597 KDM4FA0A1W2PPD8 638 aa19.07■□□□□ 0.64
LINC00884-201ENST00000437597 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
LINC00884-201ENST00000437597 CEP170Q5SW79 1584 aa19■□□□□ 0.63
LINC00884-201ENST00000437597 CUX1P39880 1505 aa18.97■□□□□ 0.63
LINC00884-201ENST00000437597 SHROOM2Q13796 1616 aa18.95■□□□□ 0.62
LINC00884-201ENST00000437597 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
LINC00884-201ENST00000437597 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
LINC00884-201ENST00000437597 ABCC10Q5T3U5 1492 aa18.9■□□□□ 0.62
LINC00884-201ENST00000437597 NUP160Q12769 1436 aa18.9■□□□□ 0.62
LINC00884-201ENST00000437597 KDM6BO15054 1643 aa18.89■□□□□ 0.61
LINC00884-201ENST00000437597 DIP2BQ9P265 1576 aa18.86■□□□□ 0.61
LINC00884-201ENST00000437597 FAM69CQ0P6D2 419 aa18.86■□□□□ 0.61
LINC00884-201ENST00000437597 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
LINC00884-201ENST00000437597 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
LINC00884-201ENST00000437597 MAPKBP1O60336 1514 aa18.83■□□□□ 0.6
LINC00884-201ENST00000437597 HECW2Q9P2P5 1572 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms