RNA–Protein interactions for RNA: ENST00000437568.6

PMS2P3-205, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 1,185 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-205ENST00000437568 NISCHQ9Y2I1 1504 aa62.09■■■■■ 7.53
PMS2P3-205ENST00000437568 CCDC180Q9P1Z9 1646 aa55.35■■■■■ 6.45
PMS2P3-205ENST00000437568 ABCC9O60706 1549 aa54.8■■■■■ 6.36
PMS2P3-205ENST00000437568 RB1CC1Q8TDY2 1594 aa52.41■■■■■ 5.98
PMS2P3-205ENST00000437568 NACADO15069 1562 aa52.23■■■■■ 5.95
PMS2P3-205ENST00000437568 DCAF8L2P0C7V8 631 aa52.14■■■■■ 5.94
PMS2P3-205ENST00000437568 MYO15BQ96JP2 1530 aa51.76■■■■■ 5.88
PMS2P3-205ENST00000437568 ZCCHC6Q5VYS8 1495 aaKnown RBP51.58■■■■■ 5.85
PMS2P3-205ENST00000437568 DCAF1Q9Y4B6 1507 aa51.33■■■■■ 5.81
PMS2P3-205ENST00000437568 PABPN1Q86U42 306 aaKnown RBP eCLIP51.18■■■■■ 5.78
PMS2P3-205ENST00000437568 UNC13AQ9UPW8 1703 aa51.17■■■■■ 5.78
PMS2P3-205ENST00000437568 DNAJC5BQ9UF47 199 aa50.97■■■■■ 5.75
PMS2P3-205ENST00000437568 BICRAQ9NZM4 1560 aa50.91■■■■■ 5.74
PMS2P3-205ENST00000437568 SCRIBQ14160 1630 aa50.48■■■■■ 5.67
PMS2P3-205ENST00000437568 SHROOM4Q9ULL8 1493 aa50.27■■■■■ 5.64
PMS2P3-205ENST00000437568 EIF4G1Q04637 1599 aaKnown RBP49.58■■■■■ 5.53
PMS2P3-205ENST00000437568 CC2D2AQ9P2K1 1620 aa49.52■■■■■ 5.52
PMS2P3-205ENST00000437568 CECR2Q9BXF3 1484 aa49.31■■■■■ 5.48
PMS2P3-205ENST00000437568 NCAPD3P42695 1498 aa48.28■■■■■ 5.32
PMS2P3-205ENST00000437568 SMARCA4P51532 1647 aa48.25■■■■■ 5.31
PMS2P3-205ENST00000437568 ATAD2BQ9ULI0 1458 aa48.2■■■■■ 5.31
PMS2P3-205ENST00000437568 BAZ1AQ9NRL2 1556 aaPredicted RBP48.12■■■■■ 5.29
PMS2P3-205ENST00000437568 SMARCA2P51531 1590 aa48.05■■■■■ 5.28
PMS2P3-205ENST00000437568 HMGXB3Q12766 1538 aa47.91■■■■■ 5.26
PMS2P3-205ENST00000437568 MROH2BQ7Z745 1585 aa47.85■■■■■ 5.25
PMS2P3-205ENST00000437568 PEG3Q9GZU2 1588 aa47.81■■■■■ 5.24
PMS2P3-205ENST00000437568 BAZ1BQ9UIG0 1483 aaKnown RBP47.72■■■■■ 5.23
PMS2P3-205ENST00000437568 NESP48681 1621 aa47.27■■■■■ 5.16
PMS2P3-205ENST00000437568 WIZO95785 1651 aa47.26■■■■■ 5.16
PMS2P3-205ENST00000437568 ERCC6Q03468 1493 aa47.23■■■■■ 5.15
PMS2P3-205ENST00000437568 RSF1Q96T23 1441 aaPredicted RBP47.12■■■■■ 5.13
PMS2P3-205ENST00000437568 LAMC3Q9Y6N6 1575 aa47.01■■■■■ 5.12
PMS2P3-205ENST00000437568 CUX2O14529 1486 aa46.97■■■■■ 5.11
PMS2P3-205ENST00000437568 CADPSQ9ULU8 1353 aa46.84■■■■■ 5.09
PMS2P3-205ENST00000437568 PDS5BQ9NTI5 1447 aa46.76■■■■■ 5.08
PMS2P3-205ENST00000437568 TOP2AP11388 1531 aaKnown RBP46.72■■■■■ 5.07
PMS2P3-205ENST00000437568 THOC2Q8NI27 1593 aaKnown RBP46.62■■■■■ 5.05
PMS2P3-205ENST00000437568 KIF21AQ7Z4S6 1674 aa46.6■■■■■ 5.05
PMS2P3-205ENST00000437568 CFTRP13569 1480 aa46.43■■■■■ 5.02
PMS2P3-205ENST00000437568 DNAJC5Q9H3Z4 198 aa46.32■■■■■ 5.01
PMS2P3-205ENST00000437568 MRC2Q9UBG0 1479 aa46.3■■■■■ 5
PMS2P3-205ENST00000437568 FANCD2Q9BXW9 1451 aa46.25■■■■■ 5
PMS2P3-205ENST00000437568 CCDC88BA6NC98 1476 aa46.24■■■■■ 4.99
PMS2P3-205ENST00000437568 CEP164Q9UPV0 1460 aa46.22■■■■■ 4.99
PMS2P3-205ENST00000437568 WDR62O43379 1518 aa46.16■■■■■ 4.98
PMS2P3-205ENST00000437568 URB2Q14146 1524 aaKnown RBP45.85■■■■■ 4.93
PMS2P3-205ENST00000437568 PRDM2Q13029 1718 aa45.85■■■■■ 4.93
PMS2P3-205ENST00000437568 SUPT5HO00267 1087 aaKnown RBP45.48■■■■■ 4.87
PMS2P3-205ENST00000437568 TOPBP1Q92547 1522 aa45.46■■■■■ 4.87
PMS2P3-205ENST00000437568 ABCC8Q09428 1581 aa45.4■■■■■ 4.86
PMS2P3-205ENST00000437568 DNMBPQ6XZF7 1577 aa45.32■■■■■ 4.85
PMS2P3-205ENST00000437568 IFT140Q96RY7 1462 aa45.3■■■■■ 4.84
PMS2P3-205ENST00000437568 ZNF608Q9ULD9 1512 aaPredicted RBP45.19■■■■■ 4.82
PMS2P3-205ENST00000437568 POLA1P09884 1462 aaPredicted RBP45.04■■■■■ 4.8
PMS2P3-205ENST00000437568 OSCARQ8IYS5 282 aa45■■■■■ 4.79
PMS2P3-205ENST00000437568 TARBP1Q13395 1621 aaKnown RBP44.99■■■■■ 4.79
PMS2P3-205ENST00000437568 CUX1P39880 1505 aa44.91■■■■■ 4.78
PMS2P3-205ENST00000437568 EIF4G3O43432 1585 aaKnown RBP44.89■■■■■ 4.78
PMS2P3-205ENST00000437568 RAD54L2Q9Y4B4 1467 aa44.88■■■■■ 4.78
PMS2P3-205ENST00000437568 AQRO60306 1485 aaKnown RBP eCLIP44.87■■■■■ 4.772e-6■■■■■ 33.7
PMS2P3-205ENST00000437568 SOGA1O94964 1423 aa44.87■■■■■ 4.77
PMS2P3-205ENST00000437568 FGD5Q6ZNL6 1462 aa44.84■■■■■ 4.77
PMS2P3-205ENST00000437568 TDRD9Q8NDG6 1382 aaKnown RBP44.7■■■■■ 4.75
PMS2P3-205ENST00000437568 WDR97A6NE52 1622 aa44.55■■■■■ 4.72
PMS2P3-205ENST00000437568 TRIM41Q8WV44 630 aa44.47■■■■■ 4.71
PMS2P3-205ENST00000437568 FBLN2P98095 1184 aa44.42■■■■■ 4.7
PMS2P3-205ENST00000437568 CHD1O14646 1710 aa44.41■■■■■ 4.7
PMS2P3-205ENST00000437568 WRNQ14191 1432 aaPredicted RBP eCLIP44.4■■■■■ 4.7
PMS2P3-205ENST00000437568 SNAPC4Q5SXM2 1469 aa44.39■■■■■ 4.7
PMS2P3-205ENST00000437568 GRIN2BQ13224 1484 aa44.38■■■■■ 4.69
PMS2P3-205ENST00000437568 ABCA10Q8WWZ4 1543 aa44.38■■■■■ 4.69
PMS2P3-205ENST00000437568 TOP2BQ02880 1626 aa44.33■■■■■ 4.69
PMS2P3-205ENST00000437568 GAPVD1Q14C86 1478 aa44.31■■■■■ 4.68
PMS2P3-205ENST00000437568 BIVM-ERCC5R4GMW8 1640 aa44.31■■■■■ 4.68
PMS2P3-205ENST00000437568 SYNJ1O43426 1573 aa44.31■■■■■ 4.68
PMS2P3-205ENST00000437568 MAGI1Q96QZ7 1491 aaPredicted RBP44.3■■■■■ 4.68
PMS2P3-205ENST00000437568 RIMBP3CA6NJZ7 1639 aa44.24■■■■■ 4.67
PMS2P3-205ENST00000437568 RIMBP3BA6NNM3 1639 aa44.24■■■■■ 4.67
PMS2P3-205ENST00000437568 RIMBP3Q9UFD9 1639 aa44.24■■■■■ 4.67
PMS2P3-205ENST00000437568 CHMP7Q8WUX9 453 aaPredicted RBP44.23■■■■■ 4.67
PMS2P3-205ENST00000437568 ABCA5Q8WWZ7 1642 aa44.21■■■■■ 4.67
PMS2P3-205ENST00000437568 ARHGEF11O15085 1522 aa44.2■■■■■ 4.67
PMS2P3-205ENST00000437568 SYNJ2O15056 1496 aa44.15■■■■■ 4.66
PMS2P3-205ENST00000437568 PBRM1Q86U86 1689 aa44.15■■■■■ 4.66
PMS2P3-205ENST00000437568 CLASP1Q7Z460 1538 aa43.99■■■■■ 4.63
PMS2P3-205ENST00000437568 CYB5RLQ6IPT4 315 aa43.89■■■■■ 4.62
PMS2P3-205ENST00000437568 ADAMTS12P58397 1594 aa43.83■■■■■ 4.61
PMS2P3-205ENST00000437568 ARAP1Q96P48 1450 aa43.83■■■■■ 4.61
PMS2P3-205ENST00000437568 ERICH3Q5RHP9 1530 aa43.81■■■■■ 4.6
PMS2P3-205ENST00000437568 GRIN2AQ12879 1464 aa43.8■■■■■ 4.6
PMS2P3-205ENST00000437568 FHAD1B1AJZ9 1412 aa43.79■■■■■ 4.6
PMS2P3-205ENST00000437568 NUP160Q12769 1436 aa43.66■■■■■ 4.58
PMS2P3-205ENST00000437568 CEP170Q5SW79 1584 aa43.6■■■■■ 4.57
PMS2P3-205ENST00000437568 KIF27Q86VH2 1401 aa43.52■■■■■ 4.56
PMS2P3-205ENST00000437568 IGF1RP08069 1367 aa43.49■■■■■ 4.55
PMS2P3-205ENST00000437568 ERCC6L2Q5T890 1561 aa43.37■■■■■ 4.53
PMS2P3-205ENST00000437568 SHROOM2Q13796 1616 aa43.35■■■■■ 4.53
PMS2P3-205ENST00000437568 JPH4Q96JJ6 628 aa43.26■■■■■ 4.52
PMS2P3-205ENST00000437568 CUL7Q14999 1698 aa43.24■■■■■ 4.51
PMS2P3-205ENST00000437568 CARMIL1Q5VZK9 1371 aa43.18■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms