RNA–Protein interactions for RNA: ENST00000437454.5

RHBDD1-207, Transcript of rhomboid domain containing 1, humanhuman

TSL 2

Gene RHBDD1, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-207ENST00000437454 NISCHQ9Y2I1 1504 aa36.63■■■■□ 3.45
RHBDD1-207ENST00000437454 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
RHBDD1-207ENST00000437454 ABCC9O60706 1549 aa32.6■■■□□ 2.81
RHBDD1-207ENST00000437454 RB1CC1Q8TDY2 1594 aa31.15■■■□□ 2.58
RHBDD1-207ENST00000437454 NACADO15069 1562 aa30.97■■■□□ 2.55
RHBDD1-207ENST00000437454 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
RHBDD1-207ENST00000437454 MYO15BQ96JP2 1530 aa30.59■■■□□ 2.49
RHBDD1-207ENST00000437454 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
RHBDD1-207ENST00000437454 ZCCHC6Q5VYS8 1495 aaKnown RBP30.41■■■□□ 2.46
RHBDD1-207ENST00000437454 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
RHBDD1-207ENST00000437454 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
RHBDD1-207ENST00000437454 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
RHBDD1-207ENST00000437454 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
RHBDD1-207ENST00000437454 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
RHBDD1-207ENST00000437454 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
RHBDD1-207ENST00000437454 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
RHBDD1-207ENST00000437454 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
RHBDD1-207ENST00000437454 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
RHBDD1-207ENST00000437454 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
RHBDD1-207ENST00000437454 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
RHBDD1-207ENST00000437454 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
RHBDD1-207ENST00000437454 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
RHBDD1-207ENST00000437454 BAZ1AQ9NRL2 1556 aaPredicted RBP28.44■■■□□ 2.14
RHBDD1-207ENST00000437454 HMGXB3Q12766 1538 aa28.4■■■□□ 2.14
RHBDD1-207ENST00000437454 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
RHBDD1-207ENST00000437454 BAZ1BQ9UIG0 1483 aaKnown RBP28.26■■■□□ 2.11
RHBDD1-207ENST00000437454 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
RHBDD1-207ENST00000437454 ERCC6Q03468 1493 aa28.14■■■□□ 2.09
RHBDD1-207ENST00000437454 NESP48681 1621 aa28.06■■■□□ 2.08
RHBDD1-207ENST00000437454 CUX2O14529 1486 aa28.02■■■□□ 2.08
RHBDD1-207ENST00000437454 LAMC3Q9Y6N6 1575 aa27.94■■■□□ 2.06
RHBDD1-207ENST00000437454 WIZO95785 1651 aa27.94■■■□□ 2.06
RHBDD1-207ENST00000437454 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
RHBDD1-207ENST00000437454 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
RHBDD1-207ENST00000437454 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
RHBDD1-207ENST00000437454 PDS5BQ9NTI5 1447 aa27.72■■■□□ 2.03
RHBDD1-207ENST00000437454 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
RHBDD1-207ENST00000437454 RSF1Q96T23 1441 aaPredicted RBP27.68■■■□□ 2.02
RHBDD1-207ENST00000437454 TOP2AP11388 1531 aaKnown RBP27.58■■■□□ 2.01
RHBDD1-207ENST00000437454 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
RHBDD1-207ENST00000437454 CFTRP13569 1480 aa27.43■■□□□ 1.98
RHBDD1-207ENST00000437454 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
RHBDD1-207ENST00000437454 WDR62O43379 1518 aa27.42■■□□□ 1.98
RHBDD1-207ENST00000437454 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
RHBDD1-207ENST00000437454 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
RHBDD1-207ENST00000437454 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
RHBDD1-207ENST00000437454 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
RHBDD1-207ENST00000437454 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
RHBDD1-207ENST00000437454 ABCC8Q09428 1581 aa26.87■■□□□ 1.89
RHBDD1-207ENST00000437454 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
RHBDD1-207ENST00000437454 DNMBPQ6XZF7 1577 aa26.85■■□□□ 1.89
RHBDD1-207ENST00000437454 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
RHBDD1-207ENST00000437454 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
RHBDD1-207ENST00000437454 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
RHBDD1-207ENST00000437454 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
RHBDD1-207ENST00000437454 POLA1P09884 1462 aaPredicted RBP26.64■■□□□ 1.86
RHBDD1-207ENST00000437454 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
RHBDD1-207ENST00000437454 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
RHBDD1-207ENST00000437454 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
RHBDD1-207ENST00000437454 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
RHBDD1-207ENST00000437454 CUX1P39880 1505 aa26.52■■□□□ 1.84
RHBDD1-207ENST00000437454 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
RHBDD1-207ENST00000437454 CHD1O14646 1710 aa26.51■■□□□ 1.83
RHBDD1-207ENST00000437454 SOGA1O94964 1423 aa26.5■■□□□ 1.83
RHBDD1-207ENST00000437454 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
RHBDD1-207ENST00000437454 RIMBP3CA6NJZ7 1639 aa26.44■■□□□ 1.82
RHBDD1-207ENST00000437454 RIMBP3BA6NNM3 1639 aa26.44■■□□□ 1.82
RHBDD1-207ENST00000437454 RIMBP3Q9UFD9 1639 aa26.44■■□□□ 1.82
RHBDD1-207ENST00000437454 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
RHBDD1-207ENST00000437454 ARHGEF11O15085 1522 aa26.35■■□□□ 1.81
RHBDD1-207ENST00000437454 FBLN2P98095 1184 aa26.33■■□□□ 1.81
RHBDD1-207ENST00000437454 SNAPC4Q5SXM2 1469 aa26.32■■□□□ 1.8
RHBDD1-207ENST00000437454 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
RHBDD1-207ENST00000437454 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
RHBDD1-207ENST00000437454 MAGI1Q96QZ7 1491 aaPredicted RBP26.26■■□□□ 1.79
RHBDD1-207ENST00000437454 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
RHBDD1-207ENST00000437454 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
RHBDD1-207ENST00000437454 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
RHBDD1-207ENST00000437454 BIVM-ERCC5R4GMW8 1640 aa26.19■■□□□ 1.78
RHBDD1-207ENST00000437454 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
RHBDD1-207ENST00000437454 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
RHBDD1-207ENST00000437454 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
RHBDD1-207ENST00000437454 SYNJ1O43426 1573 aa26.16■■□□□ 1.78
RHBDD1-207ENST00000437454 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
RHBDD1-207ENST00000437454 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
RHBDD1-207ENST00000437454 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
RHBDD1-207ENST00000437454 CYB5RLQ6IPT4 315 aa26.09■■□□□ 1.77
RHBDD1-207ENST00000437454 ADAMTS12P58397 1594 aa25.98■■□□□ 1.75
RHBDD1-207ENST00000437454 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
RHBDD1-207ENST00000437454 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
RHBDD1-207ENST00000437454 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
RHBDD1-207ENST00000437454 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
RHBDD1-207ENST00000437454 NUP160Q12769 1436 aa25.83■■□□□ 1.73
RHBDD1-207ENST00000437454 TRHP20396 242 aaPredicted RBP25.76■■□□□ 1.71
RHBDD1-207ENST00000437454 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
RHBDD1-207ENST00000437454 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
RHBDD1-207ENST00000437454 RUSC2Q8N2Y8 1516 aa25.62■■□□□ 1.69
RHBDD1-207ENST00000437454 KIF27Q86VH2 1401 aa25.62■■□□□ 1.69
RHBDD1-207ENST00000437454 CUL7Q14999 1698 aa25.61■■□□□ 1.69
RHBDD1-207ENST00000437454 IGF1RP08069 1367 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms