RNA–Protein interactions for RNA: ENST00000437336.1

RPSAP17-201, Transcript of ribosomal protein SA pseudogene 17, humanhuman

BASIC

Gene RPSAP17, Length 883 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP17-201ENST00000437336 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
RPSAP17-201ENST00000437336 ABCC9O60706 1549 aa20.73■□□□□ 0.91
RPSAP17-201ENST00000437336 CCDC180Q9P1Z9 1646 aa20.73■□□□□ 0.91
RPSAP17-201ENST00000437336 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
RPSAP17-201ENST00000437336 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
RPSAP17-201ENST00000437336 NACADO15069 1562 aa19.56■□□□□ 0.72
RPSAP17-201ENST00000437336 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
RPSAP17-201ENST00000437336 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
RPSAP17-201ENST00000437336 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
RPSAP17-201ENST00000437336 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
RPSAP17-201ENST00000437336 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
RPSAP17-201ENST00000437336 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
RPSAP17-201ENST00000437336 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
RPSAP17-201ENST00000437336 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
RPSAP17-201ENST00000437336 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
RPSAP17-201ENST00000437336 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
RPSAP17-201ENST00000437336 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
RPSAP17-201ENST00000437336 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
RPSAP17-201ENST00000437336 SMARCA4P51532 1647 aa18.14■□□□□ 0.49
RPSAP17-201ENST00000437336 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
RPSAP17-201ENST00000437336 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
RPSAP17-201ENST00000437336 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
RPSAP17-201ENST00000437336 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
RPSAP17-201ENST00000437336 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
RPSAP17-201ENST00000437336 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
RPSAP17-201ENST00000437336 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
RPSAP17-201ENST00000437336 NESP48681 1621 aa17.9■□□□□ 0.46
RPSAP17-201ENST00000437336 PEG3Q9GZU2 1588 aa17.9■□□□□ 0.46
RPSAP17-201ENST00000437336 WIZO95785 1651 aa17.83■□□□□ 0.44
RPSAP17-201ENST00000437336 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
RPSAP17-201ENST00000437336 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
RPSAP17-201ENST00000437336 CUX2O14529 1486 aa17.63■□□□□ 0.41
RPSAP17-201ENST00000437336 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
RPSAP17-201ENST00000437336 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
RPSAP17-201ENST00000437336 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
RPSAP17-201ENST00000437336 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
RPSAP17-201ENST00000437336 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
RPSAP17-201ENST00000437336 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
RPSAP17-201ENST00000437336 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
RPSAP17-201ENST00000437336 CFTRP13569 1480 aa17.41■□□□□ 0.38
RPSAP17-201ENST00000437336 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
RPSAP17-201ENST00000437336 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.37
RPSAP17-201ENST00000437336 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
RPSAP17-201ENST00000437336 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
RPSAP17-201ENST00000437336 WDR62O43379 1518 aa17.36■□□□□ 0.37
RPSAP17-201ENST00000437336 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
RPSAP17-201ENST00000437336 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
RPSAP17-201ENST00000437336 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
RPSAP17-201ENST00000437336 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
RPSAP17-201ENST00000437336 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
RPSAP17-201ENST00000437336 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
RPSAP17-201ENST00000437336 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
RPSAP17-201ENST00000437336 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
RPSAP17-201ENST00000437336 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
RPSAP17-201ENST00000437336 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
RPSAP17-201ENST00000437336 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
RPSAP17-201ENST00000437336 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
RPSAP17-201ENST00000437336 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
RPSAP17-201ENST00000437336 CUX1P39880 1505 aa16.91■□□□□ 0.3
RPSAP17-201ENST00000437336 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
RPSAP17-201ENST00000437336 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
RPSAP17-201ENST00000437336 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
RPSAP17-201ENST00000437336 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
RPSAP17-201ENST00000437336 SOGA1O94964 1423 aa16.86■□□□□ 0.29
RPSAP17-201ENST00000437336 CHD1O14646 1710 aa16.79■□□□□ 0.28
RPSAP17-201ENST00000437336 FBLN2P98095 1184 aa16.76■□□□□ 0.27
RPSAP17-201ENST00000437336 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
RPSAP17-201ENST00000437336 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
RPSAP17-201ENST00000437336 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
RPSAP17-201ENST00000437336 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
RPSAP17-201ENST00000437336 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
RPSAP17-201ENST00000437336 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
RPSAP17-201ENST00000437336 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
RPSAP17-201ENST00000437336 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
RPSAP17-201ENST00000437336 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
RPSAP17-201ENST00000437336 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
RPSAP17-201ENST00000437336 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
RPSAP17-201ENST00000437336 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
RPSAP17-201ENST00000437336 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
RPSAP17-201ENST00000437336 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
RPSAP17-201ENST00000437336 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
RPSAP17-201ENST00000437336 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
RPSAP17-201ENST00000437336 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
RPSAP17-201ENST00000437336 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
RPSAP17-201ENST00000437336 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
RPSAP17-201ENST00000437336 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
RPSAP17-201ENST00000437336 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
RPSAP17-201ENST00000437336 ADAMTS12P58397 1594 aa16.48■□□□□ 0.23
RPSAP17-201ENST00000437336 GRIN2AQ12879 1464 aa16.46■□□□□ 0.23
RPSAP17-201ENST00000437336 CEP170Q5SW79 1584 aa16.45■□□□□ 0.22
RPSAP17-201ENST00000437336 ERCC6L2Q5T890 1561 aa16.45■□□□□ 0.22
RPSAP17-201ENST00000437336 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
RPSAP17-201ENST00000437336 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
RPSAP17-201ENST00000437336 NUP160Q12769 1436 aa16.39■□□□□ 0.21
RPSAP17-201ENST00000437336 IGF1RP08069 1367 aa16.32■□□□□ 0.2
RPSAP17-201ENST00000437336 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
RPSAP17-201ENST00000437336 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
RPSAP17-201ENST00000437336 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
RPSAP17-201ENST00000437336 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
RPSAP17-201ENST00000437336 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms