RNA–Protein interactions for RNA: ENST00000437188.1

RPSAP28-201, Transcript of ribosomal protein SA pseudogene 28, humanhuman

BASIC

Gene RPSAP28, Length 874 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP28-201ENST00000437188 NISCHQ9Y2I1 1504 aa22.04■■□□□ 1.12
RPSAP28-201ENST00000437188 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
RPSAP28-201ENST00000437188 ABCC9O60706 1549 aa20.22■□□□□ 0.83
RPSAP28-201ENST00000437188 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
RPSAP28-201ENST00000437188 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
RPSAP28-201ENST00000437188 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
RPSAP28-201ENST00000437188 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
RPSAP28-201ENST00000437188 DCAF8L2P0C7V8 631 aa19■□□□□ 0.63
RPSAP28-201ENST00000437188 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
RPSAP28-201ENST00000437188 NACADO15069 1562 aa18.81■□□□□ 0.6
RPSAP28-201ENST00000437188 UNC13AQ9UPW8 1703 aa18.62■□□□□ 0.57
RPSAP28-201ENST00000437188 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
RPSAP28-201ENST00000437188 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
RPSAP28-201ENST00000437188 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
RPSAP28-201ENST00000437188 CC2D2AQ9P2K1 1620 aa18.19■□□□□ 0.5
RPSAP28-201ENST00000437188 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
RPSAP28-201ENST00000437188 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
RPSAP28-201ENST00000437188 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.49
RPSAP28-201ENST00000437188 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
RPSAP28-201ENST00000437188 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
RPSAP28-201ENST00000437188 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
RPSAP28-201ENST00000437188 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
RPSAP28-201ENST00000437188 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
RPSAP28-201ENST00000437188 CUX2O14529 1486 aa17.4■□□□□ 0.38
RPSAP28-201ENST00000437188 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
RPSAP28-201ENST00000437188 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
RPSAP28-201ENST00000437188 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
RPSAP28-201ENST00000437188 NESP48681 1621 aa17.29■□□□□ 0.36
RPSAP28-201ENST00000437188 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
RPSAP28-201ENST00000437188 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
RPSAP28-201ENST00000437188 HMGXB3Q12766 1538 aa17.19■□□□□ 0.34
RPSAP28-201ENST00000437188 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
RPSAP28-201ENST00000437188 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
RPSAP28-201ENST00000437188 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
RPSAP28-201ENST00000437188 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
RPSAP28-201ENST00000437188 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.32
RPSAP28-201ENST00000437188 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.32
RPSAP28-201ENST00000437188 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.31
RPSAP28-201ENST00000437188 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
RPSAP28-201ENST00000437188 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
RPSAP28-201ENST00000437188 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
RPSAP28-201ENST00000437188 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.3
RPSAP28-201ENST00000437188 MRC2Q9UBG0 1479 aa16.84■□□□□ 0.29
RPSAP28-201ENST00000437188 WIZO95785 1651 aa16.82■□□□□ 0.28
RPSAP28-201ENST00000437188 WDR62O43379 1518 aa16.75■□□□□ 0.27
RPSAP28-201ENST00000437188 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
RPSAP28-201ENST00000437188 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
RPSAP28-201ENST00000437188 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
RPSAP28-201ENST00000437188 CFTRP13569 1480 aa16.61■□□□□ 0.25
RPSAP28-201ENST00000437188 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
RPSAP28-201ENST00000437188 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
RPSAP28-201ENST00000437188 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
RPSAP28-201ENST00000437188 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
RPSAP28-201ENST00000437188 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
RPSAP28-201ENST00000437188 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
RPSAP28-201ENST00000437188 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
RPSAP28-201ENST00000437188 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
RPSAP28-201ENST00000437188 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
RPSAP28-201ENST00000437188 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
RPSAP28-201ENST00000437188 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
RPSAP28-201ENST00000437188 FOXD1Q16676 465 aa16.38■□□□□ 0.21
RPSAP28-201ENST00000437188 FBLN2P98095 1184 aa16.36■□□□□ 0.21
RPSAP28-201ENST00000437188 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
RPSAP28-201ENST00000437188 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
RPSAP28-201ENST00000437188 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
RPSAP28-201ENST00000437188 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
RPSAP28-201ENST00000437188 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
RPSAP28-201ENST00000437188 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
RPSAP28-201ENST00000437188 CHD1O14646 1710 aa16.25■□□□□ 0.19
RPSAP28-201ENST00000437188 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
RPSAP28-201ENST00000437188 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
RPSAP28-201ENST00000437188 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
RPSAP28-201ENST00000437188 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
RPSAP28-201ENST00000437188 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
RPSAP28-201ENST00000437188 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
RPSAP28-201ENST00000437188 SOGA1O94964 1423 aa16.15■□□□□ 0.18
RPSAP28-201ENST00000437188 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
RPSAP28-201ENST00000437188 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
RPSAP28-201ENST00000437188 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
RPSAP28-201ENST00000437188 CUX1P39880 1505 aa15.99■□□□□ 0.15
RPSAP28-201ENST00000437188 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
RPSAP28-201ENST00000437188 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
RPSAP28-201ENST00000437188 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
RPSAP28-201ENST00000437188 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
RPSAP28-201ENST00000437188 SYNJ2O15056 1496 aa15.94■□□□□ 0.14
RPSAP28-201ENST00000437188 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
RPSAP28-201ENST00000437188 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
RPSAP28-201ENST00000437188 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
RPSAP28-201ENST00000437188 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
RPSAP28-201ENST00000437188 ABCA10Q8WWZ4 1543 aa15.81■□□□□ 0.12
RPSAP28-201ENST00000437188 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
RPSAP28-201ENST00000437188 HRCP23327 699 aa15.8■□□□□ 0.12
RPSAP28-201ENST00000437188 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
RPSAP28-201ENST00000437188 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
RPSAP28-201ENST00000437188 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
RPSAP28-201ENST00000437188 PCGF6Q9BYE7 350 aa15.74■□□□□ 0.11
RPSAP28-201ENST00000437188 TRIM26Q12899 539 aaPredicted RBP15.73■□□□□ 0.11
RPSAP28-201ENST00000437188 CEP170Q5SW79 1584 aa15.73■□□□□ 0.11
RPSAP28-201ENST00000437188 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
RPSAP28-201ENST00000437188 NUP160Q12769 1436 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms