RNA–Protein interactions for RNA: ENST00000436937.1

SDHDP2-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 2, humanhuman

BASIC

Gene SDHDP2, Length 465 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP2-201ENST00000436937 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
SDHDP2-201ENST00000436937 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
SDHDP2-201ENST00000436937 ABCC9O60706 1549 aa19.24■□□□□ 0.67
SDHDP2-201ENST00000436937 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
SDHDP2-201ENST00000436937 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
SDHDP2-201ENST00000436937 NACADO15069 1562 aa18.21■□□□□ 0.51
SDHDP2-201ENST00000436937 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
SDHDP2-201ENST00000436937 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
SDHDP2-201ENST00000436937 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
SDHDP2-201ENST00000436937 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
SDHDP2-201ENST00000436937 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
SDHDP2-201ENST00000436937 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
SDHDP2-201ENST00000436937 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
SDHDP2-201ENST00000436937 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
SDHDP2-201ENST00000436937 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
SDHDP2-201ENST00000436937 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
SDHDP2-201ENST00000436937 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
SDHDP2-201ENST00000436937 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
SDHDP2-201ENST00000436937 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
SDHDP2-201ENST00000436937 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
SDHDP2-201ENST00000436937 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
SDHDP2-201ENST00000436937 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
SDHDP2-201ENST00000436937 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
SDHDP2-201ENST00000436937 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
SDHDP2-201ENST00000436937 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
SDHDP2-201ENST00000436937 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
SDHDP2-201ENST00000436937 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
SDHDP2-201ENST00000436937 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
SDHDP2-201ENST00000436937 NESP48681 1621 aa16.56■□□□□ 0.24
SDHDP2-201ENST00000436937 CUX2O14529 1486 aa16.46■□□□□ 0.23
SDHDP2-201ENST00000436937 WIZO95785 1651 aa16.46■□□□□ 0.23
SDHDP2-201ENST00000436937 LAMC3Q9Y6N6 1575 aa16.39■□□□□ 0.21
SDHDP2-201ENST00000436937 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
SDHDP2-201ENST00000436937 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
SDHDP2-201ENST00000436937 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
SDHDP2-201ENST00000436937 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
SDHDP2-201ENST00000436937 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
SDHDP2-201ENST00000436937 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
SDHDP2-201ENST00000436937 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
SDHDP2-201ENST00000436937 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
SDHDP2-201ENST00000436937 CFTRP13569 1480 aa16.17■□□□□ 0.18
SDHDP2-201ENST00000436937 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
SDHDP2-201ENST00000436937 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
SDHDP2-201ENST00000436937 WDR62O43379 1518 aa16.12■□□□□ 0.17
SDHDP2-201ENST00000436937 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
SDHDP2-201ENST00000436937 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
SDHDP2-201ENST00000436937 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
SDHDP2-201ENST00000436937 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
SDHDP2-201ENST00000436937 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
SDHDP2-201ENST00000436937 IFT140Q96RY7 1462 aa15.82■□□□□ 0.12
SDHDP2-201ENST00000436937 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
SDHDP2-201ENST00000436937 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
SDHDP2-201ENST00000436937 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
SDHDP2-201ENST00000436937 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
SDHDP2-201ENST00000436937 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
SDHDP2-201ENST00000436937 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
SDHDP2-201ENST00000436937 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.1
SDHDP2-201ENST00000436937 RAD54L2Q9Y4B4 1467 aa15.69■□□□□ 0.1
SDHDP2-201ENST00000436937 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
SDHDP2-201ENST00000436937 EIF4G3O43432 1585 aaKnown RBP15.68■□□□□ 0.1
SDHDP2-201ENST00000436937 SOGA1O94964 1423 aa15.67■□□□□ 0.1
SDHDP2-201ENST00000436937 CUX1P39880 1505 aa15.64■□□□□ 0.09
SDHDP2-201ENST00000436937 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
SDHDP2-201ENST00000436937 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
SDHDP2-201ENST00000436937 FBLN2P98095 1184 aa15.6■□□□□ 0.09
SDHDP2-201ENST00000436937 CHD1O14646 1710 aa15.54■□□□□ 0.08
SDHDP2-201ENST00000436937 RIMBP3CA6NJZ7 1639 aa15.53■□□□□ 0.08
SDHDP2-201ENST00000436937 RIMBP3BA6NNM3 1639 aa15.53■□□□□ 0.08
SDHDP2-201ENST00000436937 RIMBP3Q9UFD9 1639 aa15.53■□□□□ 0.08
SDHDP2-201ENST00000436937 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.07
SDHDP2-201ENST00000436937 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
SDHDP2-201ENST00000436937 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
SDHDP2-201ENST00000436937 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
SDHDP2-201ENST00000436937 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
SDHDP2-201ENST00000436937 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
SDHDP2-201ENST00000436937 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
SDHDP2-201ENST00000436937 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
SDHDP2-201ENST00000436937 MAGI1Q96QZ7 1491 aaPredicted RBP15.45■□□□□ 0.06
SDHDP2-201ENST00000436937 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
SDHDP2-201ENST00000436937 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
SDHDP2-201ENST00000436937 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
SDHDP2-201ENST00000436937 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
SDHDP2-201ENST00000436937 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
SDHDP2-201ENST00000436937 PBRM1Q86U86 1689 aa15.39■□□□□ 0.05
SDHDP2-201ENST00000436937 BIVM-ERCC5R4GMW8 1640 aa15.38■□□□□ 0.05
SDHDP2-201ENST00000436937 ARAP1Q96P48 1450 aa15.38■□□□□ 0.05
SDHDP2-201ENST00000436937 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
SDHDP2-201ENST00000436937 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
SDHDP2-201ENST00000436937 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
SDHDP2-201ENST00000436937 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
SDHDP2-201ENST00000436937 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
SDHDP2-201ENST00000436937 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
SDHDP2-201ENST00000436937 NUP160Q12769 1436 aa15.23■□□□□ 0.03
SDHDP2-201ENST00000436937 CEP170Q5SW79 1584 aa15.22■□□□□ 0.03
SDHDP2-201ENST00000436937 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
SDHDP2-201ENST00000436937 IGF1RP08069 1367 aa15.14■□□□□ 0.01
SDHDP2-201ENST00000436937 JPH4Q96JJ6 628 aa15.13■□□□□ 0.01
SDHDP2-201ENST00000436937 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
SDHDP2-201ENST00000436937 SHROOM2Q13796 1616 aa15.11■□□□□ 0.01
SDHDP2-201ENST00000436937 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms