RNA–Protein interactions for RNA: ENST00000436854.1

SCIN-204, Transcript of scinderin, humanhuman

TSL 3

Gene SCIN, Length 570 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIN-204ENST00000436854 NISCHQ9Y2I1 1504 aa36.9■■■■□ 3.5
SCIN-204ENST00000436854 ABCC9O60706 1549 aa34.55■■■■□ 3.12
SCIN-204ENST00000436854 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
SCIN-204ENST00000436854 DNAJC5BQ9UF47 199 aa33.39■■■□□ 2.94
SCIN-204ENST00000436854 RB1CC1Q8TDY2 1594 aa32.37■■■□□ 2.77
SCIN-204ENST00000436854 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.71
SCIN-204ENST00000436854 NACADO15069 1562 aa31.91■■■□□ 2.7
SCIN-204ENST00000436854 UNC13AQ9UPW8 1703 aa31.76■■■□□ 2.67
SCIN-204ENST00000436854 BICRAQ9NZM4 1560 aa31.63■■■□□ 2.65
SCIN-204ENST00000436854 DCAF8L2P0C7V8 631 aa31.4■■■□□ 2.62
SCIN-204ENST00000436854 DNAJC5Q9H3Z4 198 aa31.29■■■□□ 2.6
SCIN-204ENST00000436854 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
SCIN-204ENST00000436854 CC2D2AQ9P2K1 1620 aa31.17■■■□□ 2.58
SCIN-204ENST00000436854 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
SCIN-204ENST00000436854 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.54
SCIN-204ENST00000436854 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
SCIN-204ENST00000436854 SCRIBQ14160 1630 aa30.53■■■□□ 2.48
SCIN-204ENST00000436854 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
SCIN-204ENST00000436854 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
SCIN-204ENST00000436854 CUX2O14529 1486 aa30.15■■■□□ 2.42
SCIN-204ENST00000436854 ERCC6Q03468 1493 aa29.81■■■□□ 2.36
SCIN-204ENST00000436854 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
SCIN-204ENST00000436854 TRIM41Q8WV44 630 aa29.45■■■□□ 2.31
SCIN-204ENST00000436854 NESP48681 1621 aa29.44■■■□□ 2.3
SCIN-204ENST00000436854 THOC2Q8NI27 1593 aaKnown RBP29.37■■■□□ 2.29
SCIN-204ENST00000436854 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
SCIN-204ENST00000436854 HMGXB3Q12766 1538 aa29.2■■■□□ 2.27
SCIN-204ENST00000436854 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
SCIN-204ENST00000436854 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
SCIN-204ENST00000436854 KIF21AQ7Z4S6 1674 aa29.01■■■□□ 2.23
SCIN-204ENST00000436854 LAMC3Q9Y6N6 1575 aa28.98■■■□□ 2.23
SCIN-204ENST00000436854 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
SCIN-204ENST00000436854 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
SCIN-204ENST00000436854 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
SCIN-204ENST00000436854 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
SCIN-204ENST00000436854 WDR62O43379 1518 aa28.69■■■□□ 2.18
SCIN-204ENST00000436854 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
SCIN-204ENST00000436854 CADPSQ9ULU8 1353 aa28.52■■■□□ 2.16
SCIN-204ENST00000436854 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
SCIN-204ENST00000436854 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
SCIN-204ENST00000436854 RIMBP3CA6NJZ7 1639 aa28.41■■■□□ 2.14
SCIN-204ENST00000436854 RIMBP3BA6NNM3 1639 aa28.41■■■□□ 2.14
SCIN-204ENST00000436854 RIMBP3Q9UFD9 1639 aa28.41■■■□□ 2.14
SCIN-204ENST00000436854 CEP164Q9UPV0 1460 aa28.33■■■□□ 2.13
SCIN-204ENST00000436854 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
SCIN-204ENST00000436854 ARHGEF11O15085 1522 aa28.2■■■□□ 2.1
SCIN-204ENST00000436854 URB2Q14146 1524 aaKnown RBP28.13■■■□□ 2.09
SCIN-204ENST00000436854 WIZO95785 1651 aa28.06■■■□□ 2.08
SCIN-204ENST00000436854 CFTRP13569 1480 aa28.03■■■□□ 2.08
SCIN-204ENST00000436854 ZNF608Q9ULD9 1512 aaPredicted RBP27.96■■■□□ 2.07
SCIN-204ENST00000436854 CYB5RLQ6IPT4 315 aa27.95■■■□□ 2.06
SCIN-204ENST00000436854 TRHP20396 242 aaPredicted RBP27.91■■■□□ 2.06
SCIN-204ENST00000436854 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
SCIN-204ENST00000436854 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
SCIN-204ENST00000436854 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
SCIN-204ENST00000436854 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
SCIN-204ENST00000436854 CHD1O14646 1710 aa27.7■■■□□ 2.03
SCIN-204ENST00000436854 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
SCIN-204ENST00000436854 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
SCIN-204ENST00000436854 TOPBP1Q92547 1522 aa27.61■■■□□ 2.01
SCIN-204ENST00000436854 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
SCIN-204ENST00000436854 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 2
SCIN-204ENST00000436854 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
SCIN-204ENST00000436854 FBLN2P98095 1184 aa27.41■■□□□ 1.98
SCIN-204ENST00000436854 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
SCIN-204ENST00000436854 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
SCIN-204ENST00000436854 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
SCIN-204ENST00000436854 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
SCIN-204ENST00000436854 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
SCIN-204ENST00000436854 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
SCIN-204ENST00000436854 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.95
SCIN-204ENST00000436854 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
SCIN-204ENST00000436854 TDRD9Q8NDG6 1382 aaKnown RBP27.17■■□□□ 1.94
SCIN-204ENST00000436854 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
SCIN-204ENST00000436854 SOGA1O94964 1423 aa27.05■■□□□ 1.92
SCIN-204ENST00000436854 MAGI1Q96QZ7 1491 aaPredicted RBP27.05■■□□□ 1.92
SCIN-204ENST00000436854 WDR97A6NE52 1622 aa27.03■■□□□ 1.92
SCIN-204ENST00000436854 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
SCIN-204ENST00000436854 SYNJ2O15056 1496 aa27■■□□□ 1.91
SCIN-204ENST00000436854 ERCC6L2Q5T890 1561 aa26.95■■□□□ 1.9
SCIN-204ENST00000436854 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
SCIN-204ENST00000436854 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
SCIN-204ENST00000436854 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
SCIN-204ENST00000436854 KIF13AQ9H1H9 1805 aa26.85■■□□□ 1.89
SCIN-204ENST00000436854 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
SCIN-204ENST00000436854 CUX1P39880 1505 aa26.8■■□□□ 1.88
SCIN-204ENST00000436854 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
SCIN-204ENST00000436854 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
SCIN-204ENST00000436854 KDM4FA0A1W2PPD8 638 aa26.69■■□□□ 1.86
SCIN-204ENST00000436854 ABCA5Q8WWZ7 1642 aa26.68■■□□□ 1.86
SCIN-204ENST00000436854 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
SCIN-204ENST00000436854 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
SCIN-204ENST00000436854 NUP160Q12769 1436 aa26.61■■□□□ 1.85
SCIN-204ENST00000436854 ABCA10Q8WWZ4 1543 aa26.57■■□□□ 1.84
SCIN-204ENST00000436854 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
SCIN-204ENST00000436854 ABCC10Q5T3U5 1492 aa26.52■■□□□ 1.84
SCIN-204ENST00000436854 DIP2BQ9P265 1576 aa26.47■■□□□ 1.83
SCIN-204ENST00000436854 FAM69CQ0P6D2 419 aa26.46■■□□□ 1.83
SCIN-204ENST00000436854 KDM6BO15054 1643 aa26.46■■□□□ 1.83
SCIN-204ENST00000436854 MAPKBP1O60336 1514 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms