RNA–Protein interactions for RNA: ENST00000436715.5

H19-209, H19, imprinted maternally expressed transcript, humanhuman

TSL 5

Gene H19, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-209ENST00000436715 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
H19-209ENST00000436715 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
H19-209ENST00000436715 ABCC9O60706 1549 aa35.49■■■■□ 3.27
H19-209ENST00000436715 DCAF8L2P0C7V8 631 aa34.2■■■■□ 3.07
H19-209ENST00000436715 RB1CC1Q8TDY2 1594 aa34.14■■■■□ 3.06
H19-209ENST00000436715 NACADO15069 1562 aa34.11■■■■□ 3.05
H19-209ENST00000436715 ZCCHC6Q5VYS8 1495 aaKnown RBP34.1■■■■□ 3.05
H19-209ENST00000436715 MYO15BQ96JP2 1530 aa33.91■■■■□ 3.02
H19-209ENST00000436715 DCAF1Q9Y4B6 1507 aa33.82■■■■□ 3
H19-209ENST00000436715 UNC13AQ9UPW8 1703 aa33.37■■■□□ 2.93
H19-209ENST00000436715 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.91
H19-209ENST00000436715 SCRIBQ14160 1630 aa33.19■■■□□ 2.9
H19-209ENST00000436715 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
H19-209ENST00000436715 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
H19-209ENST00000436715 DNAJC5BQ9UF47 199 aa32.51■■■□□ 2.79
H19-209ENST00000436715 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
H19-209ENST00000436715 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
H19-209ENST00000436715 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
H19-209ENST00000436715 SMARCA4P51532 1647 aa31.73■■■□□ 2.67
H19-209ENST00000436715 BAZ1AQ9NRL2 1556 aaPredicted RBP31.69■■■□□ 2.66
H19-209ENST00000436715 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
H19-209ENST00000436715 ATAD2BQ9ULI0 1458 aa31.53■■■□□ 2.64
H19-209ENST00000436715 NCAPD3P42695 1498 aa31.49■■■□□ 2.63
H19-209ENST00000436715 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
H19-209ENST00000436715 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.61
H19-209ENST00000436715 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
H19-209ENST00000436715 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
H19-209ENST00000436715 WIZO95785 1651 aa31.22■■■□□ 2.59
H19-209ENST00000436715 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
H19-209ENST00000436715 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
H19-209ENST00000436715 NESP48681 1621 aa30.75■■■□□ 2.51
H19-209ENST00000436715 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
H19-209ENST00000436715 CADPSQ9ULU8 1353 aa30.59■■■□□ 2.49
H19-209ENST00000436715 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
H19-209ENST00000436715 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
H19-209ENST00000436715 CCDC88BA6NC98 1476 aa30.53■■■□□ 2.48
H19-209ENST00000436715 PDS5BQ9NTI5 1447 aa30.43■■■□□ 2.46
H19-209ENST00000436715 CFTRP13569 1480 aa30.42■■■□□ 2.46
H19-209ENST00000436715 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
H19-209ENST00000436715 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
H19-209ENST00000436715 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
H19-209ENST00000436715 CUX2O14529 1486 aa30.19■■■□□ 2.42
H19-209ENST00000436715 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
H19-209ENST00000436715 PRDM2Q13029 1718 aa30.18■■■□□ 2.42
H19-209ENST00000436715 MRC2Q9UBG0 1479 aa30.13■■■□□ 2.41
H19-209ENST00000436715 WDR62O43379 1518 aa30.01■■■□□ 2.4
H19-209ENST00000436715 URB2Q14146 1524 aaKnown RBP29.94■■■□□ 2.38
H19-209ENST00000436715 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
H19-209ENST00000436715 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
H19-209ENST00000436715 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
H19-209ENST00000436715 CUX1P39880 1505 aa29.6■■■□□ 2.33
H19-209ENST00000436715 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
H19-209ENST00000436715 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
H19-209ENST00000436715 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
H19-209ENST00000436715 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
H19-209ENST00000436715 ZNF608Q9ULD9 1512 aaPredicted RBP29.43■■■□□ 2.3
H19-209ENST00000436715 WRNQ14191 1432 aaPredicted RBP eCLIP29.43■■■□□ 2.3
H19-209ENST00000436715 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
H19-209ENST00000436715 SOGA1O94964 1423 aa29.41■■■□□ 2.3
H19-209ENST00000436715 SYNJ1O43426 1573 aa29.36■■■□□ 2.29
H19-209ENST00000436715 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
H19-209ENST00000436715 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
H19-209ENST00000436715 EIF4G3O43432 1585 aaKnown RBP29.3■■■□□ 2.28
H19-209ENST00000436715 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
H19-209ENST00000436715 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
H19-209ENST00000436715 WDR97A6NE52 1622 aa29.21■■■□□ 2.27
H19-209ENST00000436715 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
H19-209ENST00000436715 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
H19-209ENST00000436715 GAPVD1Q14C86 1478 aa29.07■■■□□ 2.24
H19-209ENST00000436715 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
H19-209ENST00000436715 GRIN2BQ13224 1484 aa29.04■■■□□ 2.24
H19-209ENST00000436715 SNAPC4Q5SXM2 1469 aa29.01■■■□□ 2.23
H19-209ENST00000436715 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
H19-209ENST00000436715 OSCARQ8IYS5 282 aa28.97■■■□□ 2.23
H19-209ENST00000436715 MAGI1Q96QZ7 1491 aaPredicted RBP28.94■■■□□ 2.22
H19-209ENST00000436715 FBLN2P98095 1184 aa28.93■■■□□ 2.22
H19-209ENST00000436715 CHD1O14646 1710 aa28.92■■■□□ 2.22
H19-209ENST00000436715 CHMP7Q8WUX9 453 aaPredicted RBP28.84■■■□□ 2.21
H19-209ENST00000436715 SYNJ2O15056 1496 aa28.84■■■□□ 2.21
H19-209ENST00000436715 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
H19-209ENST00000436715 ERICH3Q5RHP9 1530 aa28.82■■■□□ 2.2
H19-209ENST00000436715 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
H19-209ENST00000436715 ADAMTS12P58397 1594 aa28.78■■■□□ 2.2
H19-209ENST00000436715 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
H19-209ENST00000436715 IGF1RP08069 1367 aa28.69■■■□□ 2.18
H19-209ENST00000436715 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
H19-209ENST00000436715 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
H19-209ENST00000436715 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
H19-209ENST00000436715 CUL7Q14999 1698 aa28.58■■■□□ 2.16
H19-209ENST00000436715 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
H19-209ENST00000436715 NUP160Q12769 1436 aa28.54■■■□□ 2.16
H19-209ENST00000436715 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
H19-209ENST00000436715 CARMIL1Q5VZK9 1371 aa28.52■■■□□ 2.16
H19-209ENST00000436715 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
H19-209ENST00000436715 RIMBP3CA6NJZ7 1639 aa28.5■■■□□ 2.15
H19-209ENST00000436715 RIMBP3BA6NNM3 1639 aa28.5■■■□□ 2.15
H19-209ENST00000436715 RIMBP3Q9UFD9 1639 aa28.5■■■□□ 2.15
H19-209ENST00000436715 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
H19-209ENST00000436715 SHROOM2Q13796 1616 aa28.3■■■□□ 2.12
H19-209ENST00000436715 KIAA0586Q9BVV6 1533 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms