RNA–Protein interactions for RNA: ENST00000436679.2

C2CD3-206, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 1,134 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-206ENST00000436679 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
C2CD3-206ENST00000436679 ABCC9O60706 1549 aa33.66■■■□□ 2.98
C2CD3-206ENST00000436679 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
C2CD3-206ENST00000436679 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
C2CD3-206ENST00000436679 DNAJC5BQ9UF47 199 aa31.82■■■□□ 2.68
C2CD3-206ENST00000436679 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
C2CD3-206ENST00000436679 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.66
C2CD3-206ENST00000436679 NACADO15069 1562 aa31.65■■■□□ 2.66
C2CD3-206ENST00000436679 MYO15BQ96JP2 1530 aa31.55■■■□□ 2.64
C2CD3-206ENST00000436679 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
C2CD3-206ENST00000436679 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.62
C2CD3-206ENST00000436679 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
C2CD3-206ENST00000436679 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
C2CD3-206ENST00000436679 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
C2CD3-206ENST00000436679 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
C2CD3-206ENST00000436679 CECR2Q9BXF3 1484 aa30.33■■■□□ 2.45
C2CD3-206ENST00000436679 CC2D2AQ9P2K1 1620 aa30.32■■■□□ 2.44
C2CD3-206ENST00000436679 EIF4G1Q04637 1599 aaKnown RBP30.24■■■□□ 2.43
C2CD3-206ENST00000436679 DNAJC5Q9H3Z4 198 aa29.42■■■□□ 2.3
C2CD3-206ENST00000436679 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
C2CD3-206ENST00000436679 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
C2CD3-206ENST00000436679 NCAPD3P42695 1498 aa29.28■■■□□ 2.28
C2CD3-206ENST00000436679 MROH2BQ7Z745 1585 aa29.25■■■□□ 2.27
C2CD3-206ENST00000436679 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
C2CD3-206ENST00000436679 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
C2CD3-206ENST00000436679 PEG3Q9GZU2 1588 aa29.15■■■□□ 2.26
C2CD3-206ENST00000436679 CUX2O14529 1486 aa29.1■■■□□ 2.25
C2CD3-206ENST00000436679 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
C2CD3-206ENST00000436679 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
C2CD3-206ENST00000436679 RSF1Q96T23 1441 aaPredicted RBP29.02■■■□□ 2.24
C2CD3-206ENST00000436679 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
C2CD3-206ENST00000436679 NESP48681 1621 aa28.91■■■□□ 2.22
C2CD3-206ENST00000436679 WIZO95785 1651 aa28.89■■■□□ 2.22
C2CD3-206ENST00000436679 TOP2AP11388 1531 aaKnown RBP28.67■■■□□ 2.18
C2CD3-206ENST00000436679 LAMC3Q9Y6N6 1575 aa28.57■■■□□ 2.16
C2CD3-206ENST00000436679 THOC2Q8NI27 1593 aaKnown RBP28.5■■■□□ 2.15
C2CD3-206ENST00000436679 PDS5BQ9NTI5 1447 aa28.49■■■□□ 2.15
C2CD3-206ENST00000436679 KIF21AQ7Z4S6 1674 aa28.43■■■□□ 2.14
C2CD3-206ENST00000436679 CADPSQ9ULU8 1353 aa28.42■■■□□ 2.14
C2CD3-206ENST00000436679 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
C2CD3-206ENST00000436679 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
C2CD3-206ENST00000436679 MRC2Q9UBG0 1479 aa28.22■■■□□ 2.11
C2CD3-206ENST00000436679 CFTRP13569 1480 aa28.21■■■□□ 2.11
C2CD3-206ENST00000436679 WDR62O43379 1518 aa28.13■■■□□ 2.09
C2CD3-206ENST00000436679 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
C2CD3-206ENST00000436679 FANCD2Q9BXW9 1451 aa28.1■■■□□ 2.09
C2CD3-206ENST00000436679 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
C2CD3-206ENST00000436679 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
C2CD3-206ENST00000436679 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
C2CD3-206ENST00000436679 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
C2CD3-206ENST00000436679 ABCC8Q09428 1581 aa27.59■■■□□ 2.01
C2CD3-206ENST00000436679 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
C2CD3-206ENST00000436679 TOPBP1Q92547 1522 aa27.55■■■□□ 2
C2CD3-206ENST00000436679 DNMBPQ6XZF7 1577 aa27.55■■■□□ 2
C2CD3-206ENST00000436679 IFT140Q96RY7 1462 aa27.54■■■□□ 2
C2CD3-206ENST00000436679 CUX1P39880 1505 aa27.43■■□□□ 1.98
C2CD3-206ENST00000436679 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
C2CD3-206ENST00000436679 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.97
C2CD3-206ENST00000436679 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
C2CD3-206ENST00000436679 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
C2CD3-206ENST00000436679 RIMBP3CA6NJZ7 1639 aa27.3■■□□□ 1.96
C2CD3-206ENST00000436679 RIMBP3BA6NNM3 1639 aa27.3■■□□□ 1.96
C2CD3-206ENST00000436679 RIMBP3Q9UFD9 1639 aa27.3■■□□□ 1.96
C2CD3-206ENST00000436679 FGD5Q6ZNL6 1462 aa27.29■■□□□ 1.96
C2CD3-206ENST00000436679 TOP2BQ02880 1626 aa27.26■■□□□ 1.95
C2CD3-206ENST00000436679 TARBP1Q13395 1621 aaKnown RBP27.26■■□□□ 1.95
C2CD3-206ENST00000436679 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
C2CD3-206ENST00000436679 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
C2CD3-206ENST00000436679 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
C2CD3-206ENST00000436679 FBLN2P98095 1184 aa27.24■■□□□ 1.95
C2CD3-206ENST00000436679 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
C2CD3-206ENST00000436679 SOGA1O94964 1423 aa27.22■■□□□ 1.95
C2CD3-206ENST00000436679 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
C2CD3-206ENST00000436679 CYB5RLQ6IPT4 315 aa27.13■■□□□ 1.93
C2CD3-206ENST00000436679 CHD1O14646 1710 aa27.12■■□□□ 1.93
C2CD3-206ENST00000436679 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
C2CD3-206ENST00000436679 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
C2CD3-206ENST00000436679 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
C2CD3-206ENST00000436679 ARAP1Q96P48 1450 aa27■■□□□ 1.91
C2CD3-206ENST00000436679 CHMP7Q8WUX9 453 aaPredicted RBP26.98■■□□□ 1.91
C2CD3-206ENST00000436679 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
C2CD3-206ENST00000436679 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
C2CD3-206ENST00000436679 GAPVD1Q14C86 1478 aa26.91■■□□□ 1.9
C2CD3-206ENST00000436679 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
C2CD3-206ENST00000436679 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
C2CD3-206ENST00000436679 CLASP1Q7Z460 1538 aa26.81■■□□□ 1.88
C2CD3-206ENST00000436679 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
C2CD3-206ENST00000436679 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
C2CD3-206ENST00000436679 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
C2CD3-206ENST00000436679 KIF27Q86VH2 1401 aa26.75■■□□□ 1.87
C2CD3-206ENST00000436679 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
C2CD3-206ENST00000436679 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
C2CD3-206ENST00000436679 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.85
C2CD3-206ENST00000436679 IGF1RP08069 1367 aa26.62■■□□□ 1.85
C2CD3-206ENST00000436679 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
C2CD3-206ENST00000436679 RUSC2Q8N2Y8 1516 aa26.54■■□□□ 1.84
C2CD3-206ENST00000436679 CUL7Q14999 1698 aa26.53■■□□□ 1.84
C2CD3-206ENST00000436679 ERCC6L2Q5T890 1561 aa26.48■■□□□ 1.83
C2CD3-206ENST00000436679 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
C2CD3-206ENST00000436679 NUP160Q12769 1436 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms