RNA–Protein interactions for RNA: ENST00000436622.1

PFN4-202, Transcript of profilin family member 4, humanhuman

TSL 3

Gene PFN4, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN4-202ENST00000436622 NISCHQ9Y2I1 1504 aa52.36■■■■■ 5.97
PFN4-202ENST00000436622 ABCC9O60706 1549 aa48.27■■■■■ 5.32
PFN4-202ENST00000436622 CCDC180Q9P1Z9 1646 aa47.24■■■■■ 5.15
PFN4-202ENST00000436622 DNAJC5BQ9UF47 199 aa46.13■■■■■ 4.98
PFN4-202ENST00000436622 RB1CC1Q8TDY2 1594 aa45.42■■■■■ 4.86
PFN4-202ENST00000436622 NACADO15069 1562 aa44.89■■■■■ 4.78
PFN4-202ENST00000436622 PABPN1Q86U42 306 aaKnown RBP eCLIP44.87■■■■■ 4.77
PFN4-202ENST00000436622 DCAF8L2P0C7V8 631 aa44.68■■■■■ 4.74
PFN4-202ENST00000436622 UNC13AQ9UPW8 1703 aa44.45■■■■■ 4.71
PFN4-202ENST00000436622 BICRAQ9NZM4 1560 aa44.25■■■■■ 4.67
PFN4-202ENST00000436622 MYO15BQ96JP2 1530 aa43.94■■■■■ 4.62
PFN4-202ENST00000436622 CECR2Q9BXF3 1484 aa43.51■■■■■ 4.56
PFN4-202ENST00000436622 CC2D2AQ9P2K1 1620 aa43.5■■■■■ 4.55
PFN4-202ENST00000436622 SHROOM4Q9ULL8 1493 aa43.35■■■■■ 4.53
PFN4-202ENST00000436622 ZCCHC6Q5VYS8 1495 aaKnown RBP43.21■■■■■ 4.51
PFN4-202ENST00000436622 EIF4G1Q04637 1599 aaKnown RBP43.19■■■■■ 4.5
PFN4-202ENST00000436622 SCRIBQ14160 1630 aa43.15■■■■■ 4.5
PFN4-202ENST00000436622 DCAF1Q9Y4B6 1507 aa43.1■■■■■ 4.49
PFN4-202ENST00000436622 DNAJC5Q9H3Z4 198 aa42.83■■■■■ 4.45
PFN4-202ENST00000436622 CUX2O14529 1486 aa41.8■■■■■ 4.28
PFN4-202ENST00000436622 ERCC6Q03468 1493 aa41.66■■■■■ 4.26
PFN4-202ENST00000436622 NCAPD3P42695 1498 aa41.5■■■■■ 4.23
PFN4-202ENST00000436622 ATAD2BQ9ULI0 1458 aa41.3■■■■■ 4.2
PFN4-202ENST00000436622 NESP48681 1621 aa41.26■■■■■ 4.2
PFN4-202ENST00000436622 HMGXB3Q12766 1538 aa41.08■■■■■ 4.17
PFN4-202ENST00000436622 SMARCA2P51531 1590 aa41.05■■■■■ 4.16
PFN4-202ENST00000436622 SMARCA4P51532 1647 aa41.03■■■■■ 4.16
PFN4-202ENST00000436622 THOC2Q8NI27 1593 aaKnown RBP40.91■■■■■ 4.14
PFN4-202ENST00000436622 BAZ1BQ9UIG0 1483 aaKnown RBP40.83■■■■■ 4.13
PFN4-202ENST00000436622 TRIM41Q8WV44 630 aa40.7■■■■■ 4.11
PFN4-202ENST00000436622 BAZ1AQ9NRL2 1556 aaPredicted RBP40.65■■■■■ 4.1
PFN4-202ENST00000436622 LAMC3Q9Y6N6 1575 aa40.65■■■■■ 4.1
PFN4-202ENST00000436622 KIF21AQ7Z4S6 1674 aa40.62■■■■■ 4.09
PFN4-202ENST00000436622 PEG3Q9GZU2 1588 aa40.57■■■■■ 4.09
PFN4-202ENST00000436622 PDS5BQ9NTI5 1447 aa40.46■■■■■ 4.07
PFN4-202ENST00000436622 MROH2BQ7Z745 1585 aa40.41■■■■■ 4.06
PFN4-202ENST00000436622 CADPSQ9ULU8 1353 aa40.22■■■■■ 4.03
PFN4-202ENST00000436622 MRC2Q9UBG0 1479 aa40.21■■■■■ 4.03
PFN4-202ENST00000436622 WDR62O43379 1518 aa40.13■■■■■ 4.01
PFN4-202ENST00000436622 WIZO95785 1651 aa39.88■■■■□ 3.97
PFN4-202ENST00000436622 CEP164Q9UPV0 1460 aa39.88■■■■□ 3.97
PFN4-202ENST00000436622 OSCARQ8IYS5 282 aa39.81■■■■□ 3.96
PFN4-202ENST00000436622 FANCD2Q9BXW9 1451 aa39.79■■■■□ 3.96
PFN4-202ENST00000436622 CFTRP13569 1480 aa39.58■■■■□ 3.93
PFN4-202ENST00000436622 URB2Q14146 1524 aaKnown RBP39.56■■■■□ 3.92
PFN4-202ENST00000436622 RIMBP3CA6NJZ7 1639 aa39.42■■■■□ 3.9
PFN4-202ENST00000436622 RIMBP3BA6NNM3 1639 aa39.42■■■■□ 3.9
PFN4-202ENST00000436622 RIMBP3Q9UFD9 1639 aa39.42■■■■□ 3.9
PFN4-202ENST00000436622 ZNF608Q9ULD9 1512 aaPredicted RBP39.24■■■■□ 3.87
PFN4-202ENST00000436622 RSF1Q96T23 1441 aaPredicted RBP39.24■■■■□ 3.87
PFN4-202ENST00000436622 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
PFN4-202ENST00000436622 ARHGEF11O15085 1522 aa39.21■■■■□ 3.87
PFN4-202ENST00000436622 IFT140Q96RY7 1462 aa39.09■■■■□ 3.85
PFN4-202ENST00000436622 CYB5RLQ6IPT4 315 aa39.02■■■■□ 3.84
PFN4-202ENST00000436622 PRDM2Q13029 1718 aa39.01■■■■□ 3.84
PFN4-202ENST00000436622 TOPBP1Q92547 1522 aa38.94■■■■□ 3.82
PFN4-202ENST00000436622 EIF4G3O43432 1585 aaKnown RBP38.91■■■■□ 3.82
PFN4-202ENST00000436622 CCDC88BA6NC98 1476 aa38.87■■■■□ 3.81
PFN4-202ENST00000436622 TRHP20396 242 aaPredicted RBP38.84■■■■□ 3.81
PFN4-202ENST00000436622 ARAP1Q96P48 1450 aa38.79■■■■□ 3.8
PFN4-202ENST00000436622 AQRO60306 1485 aaKnown RBP eCLIP38.77■■■■□ 3.8
PFN4-202ENST00000436622 CHD1O14646 1710 aa38.77■■■■□ 3.8
PFN4-202ENST00000436622 FBLN2P98095 1184 aa38.69■■■■□ 3.78
PFN4-202ENST00000436622 DNMBPQ6XZF7 1577 aa38.68■■■■□ 3.78
PFN4-202ENST00000436622 ABCC8Q09428 1581 aa38.66■■■■□ 3.78
PFN4-202ENST00000436622 TARBP1Q13395 1621 aaKnown RBP38.66■■■■□ 3.78
PFN4-202ENST00000436622 POLA1P09884 1462 aaPredicted RBP38.5■■■■□ 3.75
PFN4-202ENST00000436622 RAD54L2Q9Y4B4 1467 aa38.45■■■■□ 3.75
PFN4-202ENST00000436622 TDRD9Q8NDG6 1382 aaKnown RBP38.41■■■■□ 3.74
PFN4-202ENST00000436622 SNAPC4Q5SXM2 1469 aa38.31■■■■□ 3.72
PFN4-202ENST00000436622 CLASP1Q7Z460 1538 aa38.31■■■■□ 3.72
PFN4-202ENST00000436622 SOGA1O94964 1423 aa38.29■■■■□ 3.72
PFN4-202ENST00000436622 AEBP2Q6ZN18 517 aaPredicted RBP38.27■■■■□ 3.72
PFN4-202ENST00000436622 CHMP7Q8WUX9 453 aaPredicted RBP38.19■■■■□ 3.7
PFN4-202ENST00000436622 FGD5Q6ZNL6 1462 aa38.15■■■■□ 3.7
PFN4-202ENST00000436622 SYNJ1O43426 1573 aa38.14■■■■□ 3.7
PFN4-202ENST00000436622 MAGI1Q96QZ7 1491 aaPredicted RBP38.08■■■■□ 3.69
PFN4-202ENST00000436622 WDR97A6NE52 1622 aa38.04■■■■□ 3.68
PFN4-202ENST00000436622 GRIN2BQ13224 1484 aa38.03■■■■□ 3.68
PFN4-202ENST00000436622 SYNJ2O15056 1496 aa38■■■■□ 3.67
PFN4-202ENST00000436622 CUX1P39880 1505 aa38■■■■□ 3.67
PFN4-202ENST00000436622 GAPVD1Q14C86 1478 aa37.96■■■■□ 3.67
PFN4-202ENST00000436622 PBRM1Q86U86 1689 aa37.82■■■■□ 3.65
PFN4-202ENST00000436622 ERCC6L2Q5T890 1561 aa37.76■■■■□ 3.63
PFN4-202ENST00000436622 ABCA5Q8WWZ7 1642 aa37.65■■■■□ 3.62
PFN4-202ENST00000436622 ABCA10Q8WWZ4 1543 aa37.61■■■■□ 3.61
PFN4-202ENST00000436622 GRIN2AQ12879 1464 aa37.57■■■■□ 3.6
PFN4-202ENST00000436622 CEP170Q5SW79 1584 aa37.54■■■■□ 3.6
PFN4-202ENST00000436622 NUP160Q12769 1436 aa37.46■■■■□ 3.59
PFN4-202ENST00000436622 ADAMTS12P58397 1594 aa37.43■■■■□ 3.58
PFN4-202ENST00000436622 SHROOM2Q13796 1616 aa37.38■■■■□ 3.57
PFN4-202ENST00000436622 KIF13AQ9H1H9 1805 aa37.36■■■■□ 3.57
PFN4-202ENST00000436622 WRNQ14191 1432 aaPredicted RBP eCLIP37.29■■■■□ 3.56
PFN4-202ENST00000436622 FHAD1B1AJZ9 1412 aa37.27■■■■□ 3.56
PFN4-202ENST00000436622 PRG4Q92954 1404 aaPredicted RBP37.21■■■■□ 3.55
PFN4-202ENST00000436622 FAM69CQ0P6D2 419 aa37.12■■■■□ 3.53
PFN4-202ENST00000436622 JPH4Q96JJ6 628 aa37.1■■■■□ 3.53
PFN4-202ENST00000436622 ERICH3Q5RHP9 1530 aa37.1■■■■□ 3.53
PFN4-202ENST00000436622 TOP2BQ02880 1626 aa37.09■■■■□ 3.53
PFN4-202ENST00000436622 BIVM-ERCC5R4GMW8 1640 aa37.09■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms