RNA–Protein interactions for RNA: ENST00000436584.6

CD33-204, Transcript of CD33 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD33, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD33-204ENST00000436584 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
CD33-204ENST00000436584 ABCC9O60706 1549 aa23.85■■□□□ 1.41
CD33-204ENST00000436584 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
CD33-204ENST00000436584 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
CD33-204ENST00000436584 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
CD33-204ENST00000436584 NACADO15069 1562 aa22.24■■□□□ 1.15
CD33-204ENST00000436584 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
CD33-204ENST00000436584 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
CD33-204ENST00000436584 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
CD33-204ENST00000436584 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
CD33-204ENST00000436584 BICRAQ9NZM4 1560 aa21.77■■□□□ 1.08
CD33-204ENST00000436584 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
CD33-204ENST00000436584 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
CD33-204ENST00000436584 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
CD33-204ENST00000436584 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1
CD33-204ENST00000436584 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1
CD33-204ENST00000436584 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
CD33-204ENST00000436584 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
CD33-204ENST00000436584 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
CD33-204ENST00000436584 CUX2O14529 1486 aa20.78■□□□□ 0.92
CD33-204ENST00000436584 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
CD33-204ENST00000436584 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
CD33-204ENST00000436584 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
CD33-204ENST00000436584 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
CD33-204ENST00000436584 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
CD33-204ENST00000436584 NESP48681 1621 aa20.31■□□□□ 0.84
CD33-204ENST00000436584 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
CD33-204ENST00000436584 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
CD33-204ENST00000436584 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
CD33-204ENST00000436584 THOC2Q8NI27 1593 aaKnown RBP20.16■□□□□ 0.82
CD33-204ENST00000436584 LAMC3Q9Y6N6 1575 aa20.14■□□□□ 0.81
CD33-204ENST00000436584 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
CD33-204ENST00000436584 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
CD33-204ENST00000436584 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
CD33-204ENST00000436584 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
CD33-204ENST00000436584 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
CD33-204ENST00000436584 MRC2Q9UBG0 1479 aa19.91■□□□□ 0.78
CD33-204ENST00000436584 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
CD33-204ENST00000436584 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
CD33-204ENST00000436584 WDR62O43379 1518 aa19.83■□□□□ 0.77
CD33-204ENST00000436584 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
CD33-204ENST00000436584 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
CD33-204ENST00000436584 CFTRP13569 1480 aa19.58■□□□□ 0.72
CD33-204ENST00000436584 WIZO95785 1651 aa19.57■□□□□ 0.72
CD33-204ENST00000436584 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
CD33-204ENST00000436584 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
CD33-204ENST00000436584 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
CD33-204ENST00000436584 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
CD33-204ENST00000436584 ARHGEF11O15085 1522 aa19.39■□□□□ 0.69
CD33-204ENST00000436584 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
CD33-204ENST00000436584 CYB5RLQ6IPT4 315 aa19.38■□□□□ 0.69
CD33-204ENST00000436584 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
CD33-204ENST00000436584 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
CD33-204ENST00000436584 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
CD33-204ENST00000436584 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.69
CD33-204ENST00000436584 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
CD33-204ENST00000436584 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
CD33-204ENST00000436584 FBLN2P98095 1184 aa19.22■□□□□ 0.67
CD33-204ENST00000436584 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
CD33-204ENST00000436584 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
CD33-204ENST00000436584 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
CD33-204ENST00000436584 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
CD33-204ENST00000436584 ARAP1Q96P48 1450 aa19.17■□□□□ 0.66
CD33-204ENST00000436584 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.665e-9■■■■■ 35.2
CD33-204ENST00000436584 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
CD33-204ENST00000436584 CHD1O14646 1710 aa19.07■□□□□ 0.64
CD33-204ENST00000436584 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
CD33-204ENST00000436584 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
CD33-204ENST00000436584 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
CD33-204ENST00000436584 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
CD33-204ENST00000436584 SOGA1O94964 1423 aa18.98■□□□□ 0.63
CD33-204ENST00000436584 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
CD33-204ENST00000436584 SNAPC4Q5SXM2 1469 aa18.93■□□□□ 0.62
CD33-204ENST00000436584 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
CD33-204ENST00000436584 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
CD33-204ENST00000436584 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
CD33-204ENST00000436584 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
CD33-204ENST00000436584 GRIN2BQ13224 1484 aa18.84■□□□□ 0.61
CD33-204ENST00000436584 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
CD33-204ENST00000436584 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
CD33-204ENST00000436584 GAPVD1Q14C86 1478 aa18.81■□□□□ 0.6
CD33-204ENST00000436584 CUX1P39880 1505 aa18.7■□□□□ 0.58
CD33-204ENST00000436584 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
CD33-204ENST00000436584 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
CD33-204ENST00000436584 GRIN2AQ12879 1464 aa18.58■□□□□ 0.56
CD33-204ENST00000436584 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
CD33-204ENST00000436584 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
CD33-204ENST00000436584 NUP160Q12769 1436 aa18.53■□□□□ 0.56
CD33-204ENST00000436584 CEP170Q5SW79 1584 aa18.52■□□□□ 0.56
CD33-204ENST00000436584 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
CD33-204ENST00000436584 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
CD33-204ENST00000436584 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.55
CD33-204ENST00000436584 FAM69CQ0P6D2 419 aa18.46■□□□□ 0.54
CD33-204ENST00000436584 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
CD33-204ENST00000436584 PRG4Q92954 1404 aaPredicted RBP18.43■□□□□ 0.54
CD33-204ENST00000436584 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
CD33-204ENST00000436584 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
CD33-204ENST00000436584 ABCC10Q5T3U5 1492 aa18.38■□□□□ 0.53
CD33-204ENST00000436584 KIF13AQ9H1H9 1805 aa18.38■□□□□ 0.53
CD33-204ENST00000436584 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms