RNA–Protein interactions for RNA: ENST00000436490.5

PDK1-206, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 5

Gene PDK1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-206ENST00000436490 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
PDK1-206ENST00000436490 ABCC9O60706 1549 aa17.82■□□□□ 0.44
PDK1-206ENST00000436490 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
PDK1-206ENST00000436490 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
PDK1-206ENST00000436490 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
PDK1-206ENST00000436490 NACADO15069 1562 aa16.66■□□□□ 0.26
PDK1-206ENST00000436490 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDK1-206ENST00000436490 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
PDK1-206ENST00000436490 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
PDK1-206ENST00000436490 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
PDK1-206ENST00000436490 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
PDK1-206ENST00000436490 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
PDK1-206ENST00000436490 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
PDK1-206ENST00000436490 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
PDK1-206ENST00000436490 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
PDK1-206ENST00000436490 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
PDK1-206ENST00000436490 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
PDK1-206ENST00000436490 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
PDK1-206ENST00000436490 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
PDK1-206ENST00000436490 CUX2O14529 1486 aa15.46■□□□□ 0.06
PDK1-206ENST00000436490 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
PDK1-206ENST00000436490 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
PDK1-206ENST00000436490 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.05
PDK1-206ENST00000436490 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
PDK1-206ENST00000436490 NESP48681 1621 aa15.25■□□□□ 0.03
PDK1-206ENST00000436490 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
PDK1-206ENST00000436490 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
PDK1-206ENST00000436490 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
PDK1-206ENST00000436490 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
PDK1-206ENST00000436490 BAZ1AQ9NRL2 1556 aaPredicted RBP15.12■□□□□ 0.01
PDK1-206ENST00000436490 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
PDK1-206ENST00000436490 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
PDK1-206ENST00000436490 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
PDK1-206ENST00000436490 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
PDK1-206ENST00000436490 KIF21AQ7Z4S6 1674 aa14.99□□□□□ -0.01
PDK1-206ENST00000436490 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
PDK1-206ENST00000436490 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
PDK1-206ENST00000436490 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
PDK1-206ENST00000436490 WDR62O43379 1518 aa14.88□□□□□ -0.03
PDK1-206ENST00000436490 WIZO95785 1651 aa14.79□□□□□ -0.04
PDK1-206ENST00000436490 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
PDK1-206ENST00000436490 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
PDK1-206ENST00000436490 CFTRP13569 1480 aa14.71□□□□□ -0.05
PDK1-206ENST00000436490 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
PDK1-206ENST00000436490 URB2Q14146 1524 aaKnown RBP14.65□□□□□ -0.06
PDK1-206ENST00000436490 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
PDK1-206ENST00000436490 TOP2AP11388 1531 aaKnown RBP14.6□□□□□ -0.07
PDK1-206ENST00000436490 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
PDK1-206ENST00000436490 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
PDK1-206ENST00000436490 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
PDK1-206ENST00000436490 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.08
PDK1-206ENST00000436490 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
PDK1-206ENST00000436490 ARHGEF11O15085 1522 aa14.48□□□□□ -0.09
PDK1-206ENST00000436490 CCDC88BA6NC98 1476 aa14.45□□□□□ -0.1
PDK1-206ENST00000436490 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
PDK1-206ENST00000436490 TOPBP1Q92547 1522 aa14.45□□□□□ -0.1
PDK1-206ENST00000436490 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
PDK1-206ENST00000436490 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
PDK1-206ENST00000436490 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
PDK1-206ENST00000436490 DNMBPQ6XZF7 1577 aa14.36□□□□□ -0.11
PDK1-206ENST00000436490 AQRO60306 1485 aaKnown RBP eCLIP14.36□□□□□ -0.119e-7■■■□□ 18.2
PDK1-206ENST00000436490 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
PDK1-206ENST00000436490 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
PDK1-206ENST00000436490 CHD1O14646 1710 aa14.3□□□□□ -0.12
PDK1-206ENST00000436490 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
PDK1-206ENST00000436490 FBLN2P98095 1184 aa14.3□□□□□ -0.12
PDK1-206ENST00000436490 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
PDK1-206ENST00000436490 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
PDK1-206ENST00000436490 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
PDK1-206ENST00000436490 SOGA1O94964 1423 aa14.22□□□□□ -0.13
PDK1-206ENST00000436490 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
PDK1-206ENST00000436490 CLASP1Q7Z460 1538 aa14.18□□□□□ -0.14
PDK1-206ENST00000436490 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
PDK1-206ENST00000436490 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
PDK1-206ENST00000436490 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
PDK1-206ENST00000436490 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
PDK1-206ENST00000436490 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
PDK1-206ENST00000436490 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
PDK1-206ENST00000436490 CUX1P39880 1505 aa14.11□□□□□ -0.15
PDK1-206ENST00000436490 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
PDK1-206ENST00000436490 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
PDK1-206ENST00000436490 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
PDK1-206ENST00000436490 PBRM1Q86U86 1689 aa14□□□□□ -0.17
PDK1-206ENST00000436490 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
PDK1-206ENST00000436490 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
PDK1-206ENST00000436490 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.18
PDK1-206ENST00000436490 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
PDK1-206ENST00000436490 NUP160Q12769 1436 aa13.91□□□□□ -0.18
PDK1-206ENST00000436490 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
PDK1-206ENST00000436490 ADAMTS12P58397 1594 aa13.89□□□□□ -0.19
PDK1-206ENST00000436490 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
PDK1-206ENST00000436490 FHAD1B1AJZ9 1412 aa13.85□□□□□ -0.19
PDK1-206ENST00000436490 SHROOM2Q13796 1616 aa13.85□□□□□ -0.19
PDK1-206ENST00000436490 TOP2BQ02880 1626 aa13.8□□□□□ -0.2
PDK1-206ENST00000436490 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
PDK1-206ENST00000436490 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
PDK1-206ENST00000436490 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
PDK1-206ENST00000436490 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
PDK1-206ENST00000436490 KIF13AQ9H1H9 1805 aa13.76□□□□□ -0.21
PDK1-206ENST00000436490 JPH4Q96JJ6 628 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms