RNA–Protein interactions for RNA: ENST00000435731.5

SDHAP1-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 3

Gene SDHAP1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-206ENST00000435731 NISCHQ9Y2I1 1504 aa53.06■■■■■ 6.08
SDHAP1-206ENST00000435731 CCDC180Q9P1Z9 1646 aa47.41■■■■■ 5.18
SDHAP1-206ENST00000435731 ABCC9O60706 1549 aa47.39■■■■■ 5.18
SDHAP1-206ENST00000435731 RB1CC1Q8TDY2 1594 aa45.13■■■■■ 4.82
SDHAP1-206ENST00000435731 DCAF8L2P0C7V8 631 aa45■■■■■ 4.79
SDHAP1-206ENST00000435731 NACADO15069 1562 aa44.86■■■■■ 4.77
SDHAP1-206ENST00000435731 DNAJC5BQ9UF47 199 aa44.3■■■■■ 4.68
SDHAP1-206ENST00000435731 MYO15BQ96JP2 1530 aa44.25■■■■■ 4.67
SDHAP1-206ENST00000435731 PABPN1Q86U42 306 aaKnown RBP eCLIP44.25■■■■■ 4.67
SDHAP1-206ENST00000435731 UNC13AQ9UPW8 1703 aa44.02■■■■■ 4.64
SDHAP1-206ENST00000435731 ZCCHC6Q5VYS8 1495 aaKnown RBP43.97■■■■■ 4.63
SDHAP1-206ENST00000435731 DCAF1Q9Y4B6 1507 aa43.77■■■■■ 4.6
SDHAP1-206ENST00000435731 BICRAQ9NZM4 1560 aa43.75■■■■■ 4.59
SDHAP1-206ENST00000435731 SCRIBQ14160 1630 aa43.33■■■■■ 4.53
SDHAP1-206ENST00000435731 SHROOM4Q9ULL8 1493 aa43.15■■■■■ 4.5
SDHAP1-206ENST00000435731 CC2D2AQ9P2K1 1620 aa42.75■■■■■ 4.43
SDHAP1-206ENST00000435731 EIF4G1Q04637 1599 aaKnown RBP42.7■■■■■ 4.43
SDHAP1-206ENST00000435731 CECR2Q9BXF3 1484 aa42.64■■■■■ 4.42
SDHAP1-206ENST00000435731 NCAPD3P42695 1498 aa41.43■■■■■ 4.22
SDHAP1-206ENST00000435731 ATAD2BQ9ULI0 1458 aa41.34■■■■■ 4.21
SDHAP1-206ENST00000435731 SMARCA4P51532 1647 aa41.31■■■■■ 4.2
SDHAP1-206ENST00000435731 SMARCA2P51531 1590 aa41.22■■■■■ 4.19
SDHAP1-206ENST00000435731 BAZ1AQ9NRL2 1556 aaPredicted RBP41.17■■■■■ 4.18
SDHAP1-206ENST00000435731 HMGXB3Q12766 1538 aa41.08■■■■■ 4.17
SDHAP1-206ENST00000435731 BAZ1BQ9UIG0 1483 aaKnown RBP40.98■■■■■ 4.15
SDHAP1-206ENST00000435731 ERCC6Q03468 1493 aa40.92■■■■■ 4.14
SDHAP1-206ENST00000435731 MROH2BQ7Z745 1585 aa40.9■■■■■ 4.14
SDHAP1-206ENST00000435731 PEG3Q9GZU2 1588 aa40.86■■■■■ 4.13
SDHAP1-206ENST00000435731 NESP48681 1621 aa40.75■■■■■ 4.11
SDHAP1-206ENST00000435731 CUX2O14529 1486 aa40.69■■■■■ 4.1
SDHAP1-206ENST00000435731 DNAJC5Q9H3Z4 198 aa40.53■■■■■ 4.08
SDHAP1-206ENST00000435731 LAMC3Q9Y6N6 1575 aa40.44■■■■■ 4.06
SDHAP1-206ENST00000435731 WIZO95785 1651 aa40.41■■■■■ 4.06
SDHAP1-206ENST00000435731 PDS5BQ9NTI5 1447 aa40.29■■■■■ 4.04
SDHAP1-206ENST00000435731 CADPSQ9ULU8 1353 aa40.24■■■■■ 4.03
SDHAP1-206ENST00000435731 THOC2Q8NI27 1593 aaKnown RBP40.18■■■■■ 4.02
SDHAP1-206ENST00000435731 RSF1Q96T23 1441 aaPredicted RBP40.16■■■■■ 4.02
SDHAP1-206ENST00000435731 KIF21AQ7Z4S6 1674 aa40.15■■■■■ 4.02
SDHAP1-206ENST00000435731 TOP2AP11388 1531 aaKnown RBP39.89■■■■□ 3.98
SDHAP1-206ENST00000435731 MRC2Q9UBG0 1479 aa39.87■■■■□ 3.97
SDHAP1-206ENST00000435731 CFTRP13569 1480 aa39.77■■■■□ 3.96
SDHAP1-206ENST00000435731 CEP164Q9UPV0 1460 aa39.77■■■■□ 3.96
SDHAP1-206ENST00000435731 FANCD2Q9BXW9 1451 aa39.76■■■■□ 3.96
SDHAP1-206ENST00000435731 WDR62O43379 1518 aa39.71■■■■□ 3.95
SDHAP1-206ENST00000435731 CCDC88BA6NC98 1476 aa39.5■■■■□ 3.91
SDHAP1-206ENST00000435731 URB2Q14146 1524 aaKnown RBP39.38■■■■□ 3.89
SDHAP1-206ENST00000435731 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
SDHAP1-206ENST00000435731 OSCARQ8IYS5 282 aa39.03■■■■□ 3.84
SDHAP1-206ENST00000435731 TOPBP1Q92547 1522 aa39.01■■■■□ 3.84
SDHAP1-206ENST00000435731 IFT140Q96RY7 1462 aa38.97■■■■□ 3.83
SDHAP1-206ENST00000435731 ABCC8Q09428 1581 aa38.96■■■■□ 3.83
SDHAP1-206ENST00000435731 TRIM41Q8WV44 630 aa38.95■■■■□ 3.83
SDHAP1-206ENST00000435731 ZNF608Q9ULD9 1512 aaPredicted RBP38.89■■■■□ 3.82
SDHAP1-206ENST00000435731 DNMBPQ6XZF7 1577 aa38.85■■■■□ 3.81
SDHAP1-206ENST00000435731 SUPT5HO00267 1087 aaKnown RBP38.74■■■■□ 3.79
SDHAP1-206ENST00000435731 EIF4G3O43432 1585 aaKnown RBP38.62■■■■□ 3.77
SDHAP1-206ENST00000435731 AQRO60306 1485 aaKnown RBP eCLIP38.62■■■■□ 3.778e-7■■■■■ 54.1
SDHAP1-206ENST00000435731 POLA1P09884 1462 aaPredicted RBP38.62■■■■□ 3.77
SDHAP1-206ENST00000435731 TARBP1Q13395 1621 aaKnown RBP38.59■■■■□ 3.77
SDHAP1-206ENST00000435731 SOGA1O94964 1423 aa38.53■■■■□ 3.76
SDHAP1-206ENST00000435731 RAD54L2Q9Y4B4 1467 aa38.53■■■■□ 3.76
SDHAP1-206ENST00000435731 FBLN2P98095 1184 aa38.47■■■■□ 3.75
SDHAP1-206ENST00000435731 TDRD9Q8NDG6 1382 aaKnown RBP38.44■■■■□ 3.74
SDHAP1-206ENST00000435731 FGD5Q6ZNL6 1462 aa38.42■■■■□ 3.74
SDHAP1-206ENST00000435731 CUX1P39880 1505 aa38.4■■■■□ 3.74
SDHAP1-206ENST00000435731 RIMBP3CA6NJZ7 1639 aa38.34■■■■□ 3.73
SDHAP1-206ENST00000435731 RIMBP3BA6NNM3 1639 aa38.34■■■■□ 3.73
SDHAP1-206ENST00000435731 RIMBP3Q9UFD9 1639 aa38.34■■■■□ 3.73
SDHAP1-206ENST00000435731 CHD1O14646 1710 aa38.29■■■■□ 3.72
SDHAP1-206ENST00000435731 ARHGEF11O15085 1522 aa38.25■■■■□ 3.71
SDHAP1-206ENST00000435731 WDR97A6NE52 1622 aa38.19■■■■□ 3.7
SDHAP1-206ENST00000435731 SNAPC4Q5SXM2 1469 aa38.18■■■■□ 3.7
SDHAP1-206ENST00000435731 CHMP7Q8WUX9 453 aaPredicted RBP38.17■■■■□ 3.7
SDHAP1-206ENST00000435731 CYB5RLQ6IPT4 315 aa38.13■■■■□ 3.69
SDHAP1-206ENST00000435731 GRIN2BQ13224 1484 aa38.12■■■■□ 3.69
SDHAP1-206ENST00000435731 MAGI1Q96QZ7 1491 aaPredicted RBP38.06■■■■□ 3.68
SDHAP1-206ENST00000435731 GAPVD1Q14C86 1478 aa38.03■■■■□ 3.68
SDHAP1-206ENST00000435731 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
SDHAP1-206ENST00000435731 SYNJ2O15056 1496 aa37.95■■■■□ 3.67
SDHAP1-206ENST00000435731 WRNQ14191 1432 aaPredicted RBP eCLIP37.94■■■■□ 3.66
SDHAP1-206ENST00000435731 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
SDHAP1-206ENST00000435731 PBRM1Q86U86 1689 aa37.91■■■■□ 3.66
SDHAP1-206ENST00000435731 ARAP1Q96P48 1450 aa37.88■■■■□ 3.65
SDHAP1-206ENST00000435731 ABCA5Q8WWZ7 1642 aa37.84■■■■□ 3.65
SDHAP1-206ENST00000435731 CLASP1Q7Z460 1538 aa37.84■■■■□ 3.65
SDHAP1-206ENST00000435731 TOP2BQ02880 1626 aa37.83■■■■□ 3.65
SDHAP1-206ENST00000435731 BIVM-ERCC5R4GMW8 1640 aa37.79■■■■□ 3.64
SDHAP1-206ENST00000435731 TRHP20396 242 aaPredicted RBP37.69■■■■□ 3.62
SDHAP1-206ENST00000435731 GRIN2AQ12879 1464 aa37.61■■■■□ 3.61
SDHAP1-206ENST00000435731 ADAMTS12P58397 1594 aa37.55■■■■□ 3.6
SDHAP1-206ENST00000435731 FHAD1B1AJZ9 1412 aa37.55■■■■□ 3.6
SDHAP1-206ENST00000435731 ERICH3Q5RHP9 1530 aa37.5■■■■□ 3.59
SDHAP1-206ENST00000435731 NUP160Q12769 1436 aa37.45■■■■□ 3.59
SDHAP1-206ENST00000435731 CEP170Q5SW79 1584 aa37.43■■■■□ 3.58
SDHAP1-206ENST00000435731 ERCC6L2Q5T890 1561 aa37.32■■■■□ 3.56
SDHAP1-206ENST00000435731 JPH4Q96JJ6 628 aa37.22■■■■□ 3.55
SDHAP1-206ENST00000435731 SHROOM2Q13796 1616 aa37.2■■■■□ 3.55
SDHAP1-206ENST00000435731 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
SDHAP1-206ENST00000435731 PRG4Q92954 1404 aaPredicted RBP37.17■■■■□ 3.54
SDHAP1-206ENST00000435731 IGF1RP08069 1367 aa37.16■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms