RNA–Protein interactions for RNA: ENST00000435617.1

LINC00444-201, long intergenic non-protein coding RNA 444, humanhuman

TSL 5 BASIC

Gene LINC00444, Length 215 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00444-201ENST00000435617 NISCHQ9Y2I1 1504 aa21.23■□□□□ 0.99
LINC00444-201ENST00000435617 ABCC9O60706 1549 aa20.18■□□□□ 0.82
LINC00444-201ENST00000435617 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
LINC00444-201ENST00000435617 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
LINC00444-201ENST00000435617 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
LINC00444-201ENST00000435617 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
LINC00444-201ENST00000435617 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
LINC00444-201ENST00000435617 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
LINC00444-201ENST00000435617 NACADO15069 1562 aa18.44■□□□□ 0.54
LINC00444-201ENST00000435617 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
LINC00444-201ENST00000435617 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
LINC00444-201ENST00000435617 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
LINC00444-201ENST00000435617 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
LINC00444-201ENST00000435617 MYO15BQ96JP2 1530 aa17.89■□□□□ 0.45
LINC00444-201ENST00000435617 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
LINC00444-201ENST00000435617 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.45
LINC00444-201ENST00000435617 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
LINC00444-201ENST00000435617 CUX2O14529 1486 aa17.6■□□□□ 0.41
LINC00444-201ENST00000435617 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
LINC00444-201ENST00000435617 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
LINC00444-201ENST00000435617 DCAF1Q9Y4B6 1507 aa17.4■□□□□ 0.38
LINC00444-201ENST00000435617 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
LINC00444-201ENST00000435617 NESP48681 1621 aa17.13■□□□□ 0.33
LINC00444-201ENST00000435617 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
LINC00444-201ENST00000435617 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
LINC00444-201ENST00000435617 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
LINC00444-201ENST00000435617 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
LINC00444-201ENST00000435617 HMGXB3Q12766 1538 aa16.81■□□□□ 0.28
LINC00444-201ENST00000435617 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
LINC00444-201ENST00000435617 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
LINC00444-201ENST00000435617 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
LINC00444-201ENST00000435617 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
LINC00444-201ENST00000435617 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
LINC00444-201ENST00000435617 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
LINC00444-201ENST00000435617 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
LINC00444-201ENST00000435617 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
LINC00444-201ENST00000435617 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
LINC00444-201ENST00000435617 WDR62O43379 1518 aa16.59■□□□□ 0.25
LINC00444-201ENST00000435617 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
LINC00444-201ENST00000435617 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
LINC00444-201ENST00000435617 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
LINC00444-201ENST00000435617 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
LINC00444-201ENST00000435617 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
LINC00444-201ENST00000435617 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
LINC00444-201ENST00000435617 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
LINC00444-201ENST00000435617 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
LINC00444-201ENST00000435617 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
LINC00444-201ENST00000435617 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
LINC00444-201ENST00000435617 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
LINC00444-201ENST00000435617 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
LINC00444-201ENST00000435617 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
LINC00444-201ENST00000435617 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
LINC00444-201ENST00000435617 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
LINC00444-201ENST00000435617 CFTRP13569 1480 aa16.18■□□□□ 0.18
LINC00444-201ENST00000435617 FBLN2P98095 1184 aa16.15■□□□□ 0.18
LINC00444-201ENST00000435617 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
LINC00444-201ENST00000435617 WIZO95785 1651 aa16.13■□□□□ 0.17
LINC00444-201ENST00000435617 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
LINC00444-201ENST00000435617 ILDR1Q86SU0 546 aaPredicted RBP16.04■□□□□ 0.16
LINC00444-201ENST00000435617 CHD1O14646 1710 aa16.03■□□□□ 0.16
LINC00444-201ENST00000435617 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC00444-201ENST00000435617 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
LINC00444-201ENST00000435617 TOPBP1Q92547 1522 aa15.96■□□□□ 0.15
LINC00444-201ENST00000435617 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
LINC00444-201ENST00000435617 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
LINC00444-201ENST00000435617 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
LINC00444-201ENST00000435617 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
LINC00444-201ENST00000435617 TOP2AP11388 1531 aaKnown RBP15.83■□□□□ 0.12
LINC00444-201ENST00000435617 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
LINC00444-201ENST00000435617 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
LINC00444-201ENST00000435617 GAPVD1Q14C86 1478 aa15.8■□□□□ 0.12
LINC00444-201ENST00000435617 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
LINC00444-201ENST00000435617 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
LINC00444-201ENST00000435617 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
LINC00444-201ENST00000435617 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
LINC00444-201ENST00000435617 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
LINC00444-201ENST00000435617 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
LINC00444-201ENST00000435617 KDM4FA0A1W2PPD8 638 aa15.74■□□□□ 0.11
LINC00444-201ENST00000435617 SOGA1O94964 1423 aa15.72■□□□□ 0.11
LINC00444-201ENST00000435617 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
LINC00444-201ENST00000435617 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
LINC00444-201ENST00000435617 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
LINC00444-201ENST00000435617 GRIN2BQ13224 1484 aa15.62■□□□□ 0.09
LINC00444-201ENST00000435617 FAM69CQ0P6D2 419 aa15.58■□□□□ 0.08
LINC00444-201ENST00000435617 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
LINC00444-201ENST00000435617 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
LINC00444-201ENST00000435617 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
LINC00444-201ENST00000435617 CEP170Q5SW79 1584 aa15.47■□□□□ 0.07
LINC00444-201ENST00000435617 ABCC10Q5T3U5 1492 aa15.45■□□□□ 0.06
LINC00444-201ENST00000435617 CUX1P39880 1505 aa15.43■□□□□ 0.06
LINC00444-201ENST00000435617 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
LINC00444-201ENST00000435617 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC00444-201ENST00000435617 KDM6BO15054 1643 aa15.42■□□□□ 0.06
LINC00444-201ENST00000435617 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
LINC00444-201ENST00000435617 NUP160Q12769 1436 aa15.38■□□□□ 0.05
LINC00444-201ENST00000435617 PRG4Q92954 1404 aaPredicted RBP15.36■□□□□ 0.05
LINC00444-201ENST00000435617 FBXO41Q8TF61 875 aa15.36■□□□□ 0.05
LINC00444-201ENST00000435617 HECW2Q9P2P5 1572 aa15.35■□□□□ 0.05
LINC00444-201ENST00000435617 ADGRL1O94910 1474 aa15.34■□□□□ 0.05
LINC00444-201ENST00000435617 DIP2BQ9P265 1576 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms