RNA–Protein interactions for RNA: ENST00000435431.5

CKAP2L-202, Transcript of cytoskeleton associated protein 2 like, humanhuman

TSL 2

Gene CKAP2L, Length 2,455 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2L-202ENST00000435431 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
CKAP2L-202ENST00000435431 CCDC180Q9P1Z9 1646 aa15.98■□□□□ 0.15
CKAP2L-202ENST00000435431 ABCC9O60706 1549 aa15.18■□□□□ 0.02
CKAP2L-202ENST00000435431 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
CKAP2L-202ENST00000435431 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
CKAP2L-202ENST00000435431 MYO15BQ96JP2 1530 aa14.99□□□□□ -0.01
CKAP2L-202ENST00000435431 NACADO15069 1562 aa14.94□□□□□ -0.02
CKAP2L-202ENST00000435431 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
CKAP2L-202ENST00000435431 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
CKAP2L-202ENST00000435431 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
CKAP2L-202ENST00000435431 UNC13AQ9UPW8 1703 aa14.43□□□□□ -0.1
CKAP2L-202ENST00000435431 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
CKAP2L-202ENST00000435431 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
CKAP2L-202ENST00000435431 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
CKAP2L-202ENST00000435431 BAZ1AQ9NRL2 1556 aaPredicted RBP14.02□□□□□ -0.16
CKAP2L-202ENST00000435431 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
CKAP2L-202ENST00000435431 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
CKAP2L-202ENST00000435431 EIF4G1Q04637 1599 aaKnown RBP13.94□□□□□ -0.18
CKAP2L-202ENST00000435431 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
CKAP2L-202ENST00000435431 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
CKAP2L-202ENST00000435431 SMARCA2P51531 1590 aa13.84□□□□□ -0.19
CKAP2L-202ENST00000435431 PEG3Q9GZU2 1588 aa13.84□□□□□ -0.19
CKAP2L-202ENST00000435431 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
CKAP2L-202ENST00000435431 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
CKAP2L-202ENST00000435431 WIZO95785 1651 aa13.75□□□□□ -0.21
CKAP2L-202ENST00000435431 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
CKAP2L-202ENST00000435431 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
CKAP2L-202ENST00000435431 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
CKAP2L-202ENST00000435431 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
CKAP2L-202ENST00000435431 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
CKAP2L-202ENST00000435431 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
CKAP2L-202ENST00000435431 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
CKAP2L-202ENST00000435431 HRCP23327 699 aa13.37□□□□□ -0.27
CKAP2L-202ENST00000435431 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
CKAP2L-202ENST00000435431 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
CKAP2L-202ENST00000435431 CFTRP13569 1480 aa13.35□□□□□ -0.27
CKAP2L-202ENST00000435431 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
CKAP2L-202ENST00000435431 PDS5BQ9NTI5 1447 aa13.26□□□□□ -0.29
CKAP2L-202ENST00000435431 NESP48681 1621 aa13.21□□□□□ -0.29
CKAP2L-202ENST00000435431 FANCD2Q9BXW9 1451 aa13.19□□□□□ -0.3
CKAP2L-202ENST00000435431 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
CKAP2L-202ENST00000435431 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
CKAP2L-202ENST00000435431 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
CKAP2L-202ENST00000435431 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
CKAP2L-202ENST00000435431 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
CKAP2L-202ENST00000435431 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
CKAP2L-202ENST00000435431 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
CKAP2L-202ENST00000435431 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
CKAP2L-202ENST00000435431 TOP2BQ02880 1626 aa13.05□□□□□ -0.32
CKAP2L-202ENST00000435431 BIVM-ERCC5R4GMW8 1640 aa13.04□□□□□ -0.32
CKAP2L-202ENST00000435431 CHIC1Q5VXU3 224 aa13.04□□□□□ -0.32
CKAP2L-202ENST00000435431 CUX1P39880 1505 aa13.02□□□□□ -0.32
CKAP2L-202ENST00000435431 TRIM41Q8WV44 630 aa13.02□□□□□ -0.32
CKAP2L-202ENST00000435431 TOPBP1Q92547 1522 aa13.02□□□□□ -0.33
CKAP2L-202ENST00000435431 WDR62O43379 1518 aa13.01□□□□□ -0.33
CKAP2L-202ENST00000435431 URB2Q14146 1524 aaKnown RBP13.01□□□□□ -0.33
CKAP2L-202ENST00000435431 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
CKAP2L-202ENST00000435431 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
CKAP2L-202ENST00000435431 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.34
CKAP2L-202ENST00000435431 FGD5Q6ZNL6 1462 aa12.94□□□□□ -0.34
CKAP2L-202ENST00000435431 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
CKAP2L-202ENST00000435431 MYT1Q01538 1121 aa12.93□□□□□ -0.34
CKAP2L-202ENST00000435431 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
CKAP2L-202ENST00000435431 CUX2O14529 1486 aa12.9□□□□□ -0.34
CKAP2L-202ENST00000435431 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
CKAP2L-202ENST00000435431 SOGA1O94964 1423 aa12.89□□□□□ -0.35
CKAP2L-202ENST00000435431 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
CKAP2L-202ENST00000435431 EEA1Q15075 1411 aa12.87□□□□□ -0.35
CKAP2L-202ENST00000435431 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
CKAP2L-202ENST00000435431 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
CKAP2L-202ENST00000435431 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
CKAP2L-202ENST00000435431 RAD54L2Q9Y4B4 1467 aa12.82□□□□□ -0.36
CKAP2L-202ENST00000435431 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.37
CKAP2L-202ENST00000435431 GAPVD1Q14C86 1478 aa12.75□□□□□ -0.37
CKAP2L-202ENST00000435431 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
CKAP2L-202ENST00000435431 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
CKAP2L-202ENST00000435431 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
CKAP2L-202ENST00000435431 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
CKAP2L-202ENST00000435431 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
CKAP2L-202ENST00000435431 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.38
CKAP2L-202ENST00000435431 CUL7Q14999 1698 aa12.71□□□□□ -0.38
CKAP2L-202ENST00000435431 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
CKAP2L-202ENST00000435431 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
CKAP2L-202ENST00000435431 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.388e-7■■■■□ 26.6
CKAP2L-202ENST00000435431 IGF1RP08069 1367 aa12.68□□□□□ -0.38
CKAP2L-202ENST00000435431 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
CKAP2L-202ENST00000435431 SCAF1Q9H7N4 1312 aaKnown RBP12.67□□□□□ -0.38
CKAP2L-202ENST00000435431 KIF21BO75037 1637 aa12.66□□□□□ -0.38
CKAP2L-202ENST00000435431 FAM9AQ8IZU1 332 aaPredicted RBP12.66□□□□□ -0.38
CKAP2L-202ENST00000435431 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
CKAP2L-202ENST00000435431 PRXQ9BXM0 1461 aa12.64□□□□□ -0.39
CKAP2L-202ENST00000435431 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
CKAP2L-202ENST00000435431 ADAMTS12P58397 1594 aa12.62□□□□□ -0.39
CKAP2L-202ENST00000435431 RAPGEF2Q9Y4G8 1499 aa12.62□□□□□ -0.39
CKAP2L-202ENST00000435431 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
CKAP2L-202ENST00000435431 GOLGA3Q08378 1498 aa12.61□□□□□ -0.39
CKAP2L-202ENST00000435431 SYNJ2O15056 1496 aa12.6□□□□□ -0.39
CKAP2L-202ENST00000435431 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
CKAP2L-202ENST00000435431 TRIM26Q12899 539 aaPredicted RBP12.59□□□□□ -0.39
CKAP2L-202ENST00000435431 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 297.2 ms