RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 NISCHQ9Y2I1 1504 aa39.07■■■■□ 3.84
CCDC13-202ENST00000435327 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
CCDC13-202ENST00000435327 ABCC9O60706 1549 aa33.08■■■□□ 2.89
CCDC13-202ENST00000435327 ZCCHC6Q5VYS8 1495 aaKnown RBP32.69■■■□□ 2.82
CCDC13-202ENST00000435327 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
CCDC13-202ENST00000435327 DCAF1Q9Y4B6 1507 aa32.32■■■□□ 2.76
CCDC13-202ENST00000435327 NACADO15069 1562 aa32.21■■■□□ 2.75
CCDC13-202ENST00000435327 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
CCDC13-202ENST00000435327 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
CCDC13-202ENST00000435327 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
CCDC13-202ENST00000435327 UNC13AQ9UPW8 1703 aa31.47■■■□□ 2.63
CCDC13-202ENST00000435327 SHROOM4Q9ULL8 1493 aa31.36■■■□□ 2.61
CCDC13-202ENST00000435327 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
CCDC13-202ENST00000435327 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
CCDC13-202ENST00000435327 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
CCDC13-202ENST00000435327 BAZ1AQ9NRL2 1556 aaPredicted RBP30.25■■■□□ 2.43
CCDC13-202ENST00000435327 EIF4G1Q04637 1599 aaKnown RBP30.23■■■□□ 2.43
CCDC13-202ENST00000435327 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
CCDC13-202ENST00000435327 MROH2BQ7Z745 1585 aa30.15■■■□□ 2.42
CCDC13-202ENST00000435327 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
CCDC13-202ENST00000435327 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
CCDC13-202ENST00000435327 WIZO95785 1651 aa29.9■■■□□ 2.38
CCDC13-202ENST00000435327 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
CCDC13-202ENST00000435327 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
CCDC13-202ENST00000435327 SMARCA2P51531 1590 aa29.84■■■□□ 2.37
CCDC13-202ENST00000435327 ATAD2BQ9ULI0 1458 aa29.82■■■□□ 2.36
CCDC13-202ENST00000435327 DNAJC5BQ9UF47 199 aa29.68■■■□□ 2.34
CCDC13-202ENST00000435327 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
CCDC13-202ENST00000435327 BAZ1BQ9UIG0 1483 aaKnown RBP29.65■■■□□ 2.34
CCDC13-202ENST00000435327 HMGXB3Q12766 1538 aa29.64■■■□□ 2.34
CCDC13-202ENST00000435327 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
CCDC13-202ENST00000435327 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
CCDC13-202ENST00000435327 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
CCDC13-202ENST00000435327 CFTRP13569 1480 aa28.84■■■□□ 2.21
CCDC13-202ENST00000435327 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
CCDC13-202ENST00000435327 NESP48681 1621 aa28.83■■■□□ 2.21
CCDC13-202ENST00000435327 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
CCDC13-202ENST00000435327 PDS5BQ9NTI5 1447 aa28.59■■■□□ 2.17
CCDC13-202ENST00000435327 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
CCDC13-202ENST00000435327 KIF21AQ7Z4S6 1674 aa28.57■■■□□ 2.16
CCDC13-202ENST00000435327 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
CCDC13-202ENST00000435327 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
CCDC13-202ENST00000435327 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
CCDC13-202ENST00000435327 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
CCDC13-202ENST00000435327 MRC2Q9UBG0 1479 aa28.29■■■□□ 2.12
CCDC13-202ENST00000435327 THOC2Q8NI27 1593 aaKnown RBP28.25■■■□□ 2.11
CCDC13-202ENST00000435327 CUX1P39880 1505 aa28.24■■■□□ 2.11
CCDC13-202ENST00000435327 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
CCDC13-202ENST00000435327 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
CCDC13-202ENST00000435327 DNMBPQ6XZF7 1577 aa28.23■■■□□ 2.11
CCDC13-202ENST00000435327 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
CCDC13-202ENST00000435327 BIVM-ERCC5R4GMW8 1640 aa28.2■■■□□ 2.1
CCDC13-202ENST00000435327 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
CCDC13-202ENST00000435327 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
CCDC13-202ENST00000435327 WDR62O43379 1518 aa28.17■■■□□ 2.1
CCDC13-202ENST00000435327 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
CCDC13-202ENST00000435327 FGD5Q6ZNL6 1462 aa28.05■■■□□ 2.08
CCDC13-202ENST00000435327 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
CCDC13-202ENST00000435327 SOGA1O94964 1423 aa27.89■■■□□ 2.06
CCDC13-202ENST00000435327 CUX2O14529 1486 aa27.89■■■□□ 2.05
CCDC13-202ENST00000435327 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
CCDC13-202ENST00000435327 TARBP1Q13395 1621 aaKnown RBP27.84■■■□□ 2.05
CCDC13-202ENST00000435327 IFT140Q96RY7 1462 aa27.83■■■□□ 2.05
CCDC13-202ENST00000435327 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
CCDC13-202ENST00000435327 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
CCDC13-202ENST00000435327 ZNF608Q9ULD9 1512 aaPredicted RBP27.66■■■□□ 2.02
CCDC13-202ENST00000435327 KIF27Q86VH2 1401 aa27.66■■■□□ 2.02
CCDC13-202ENST00000435327 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
CCDC13-202ENST00000435327 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.02
CCDC13-202ENST00000435327 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
CCDC13-202ENST00000435327 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
CCDC13-202ENST00000435327 AQRO60306 1485 aaKnown RBP eCLIP27.58■■■□□ 2.01
CCDC13-202ENST00000435327 GAPVD1Q14C86 1478 aa27.58■■■□□ 2.01
CCDC13-202ENST00000435327 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
CCDC13-202ENST00000435327 EEA1Q15075 1411 aa27.58■■■□□ 2
CCDC13-202ENST00000435327 PBRM1Q86U86 1689 aa27.57■■■□□ 2
CCDC13-202ENST00000435327 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
CCDC13-202ENST00000435327 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
CCDC13-202ENST00000435327 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
CCDC13-202ENST00000435327 IGF1RP08069 1367 aa27.42■■□□□ 1.98
CCDC13-202ENST00000435327 CUL7Q14999 1698 aa27.4■■□□□ 1.98
CCDC13-202ENST00000435327 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
CCDC13-202ENST00000435327 ADAMTS12P58397 1594 aa27.34■■□□□ 1.97
CCDC13-202ENST00000435327 MAGI1Q96QZ7 1491 aaPredicted RBP27.33■■□□□ 1.97
CCDC13-202ENST00000435327 CARMIL1Q5VZK9 1371 aa27.31■■□□□ 1.96
CCDC13-202ENST00000435327 KIF21BO75037 1637 aa27.28■■□□□ 1.96
CCDC13-202ENST00000435327 FHAD1B1AJZ9 1412 aa27.28■■□□□ 1.96
CCDC13-202ENST00000435327 PRXQ9BXM0 1461 aa27.27■■□□□ 1.96
CCDC13-202ENST00000435327 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
CCDC13-202ENST00000435327 RAPGEF2Q9Y4G8 1499 aa27.23■■□□□ 1.95
CCDC13-202ENST00000435327 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
CCDC13-202ENST00000435327 EHMT2Q96KQ7 1210 aa27.2■■□□□ 1.94
CCDC13-202ENST00000435327 CHD1O14646 1710 aa27.19■■□□□ 1.94
CCDC13-202ENST00000435327 GOLGA3Q08378 1498 aa27.17■■□□□ 1.94
CCDC13-202ENST00000435327 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
CCDC13-202ENST00000435327 FBLN2P98095 1184 aa27.15■■□□□ 1.94
CCDC13-202ENST00000435327 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
CCDC13-202ENST00000435327 LOC105371045A0A1W2PR82 267 aa27.07■■□□□ 1.92
CCDC13-202ENST00000435327 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
CCDC13-202ENST00000435327 CTTNBP2Q8WZ74 1663 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms