RNA–Protein interactions for RNA: ENST00000435313.6

GLI2-206, Transcript of GLI family zinc finger 2, humanhuman

TSL 5

Gene GLI2, Length 2,088 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI2-206ENST00000435313 NISCHQ9Y2I1 1504 aa35.03■■■■□ 3.2
GLI2-206ENST00000435313 CCDC180Q9P1Z9 1646 aa30.85■■■□□ 2.53
GLI2-206ENST00000435313 ABCC9O60706 1549 aa29.98■■■□□ 2.39
GLI2-206ENST00000435313 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
GLI2-206ENST00000435313 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
GLI2-206ENST00000435313 NACADO15069 1562 aa28.98■■■□□ 2.23
GLI2-206ENST00000435313 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
GLI2-206ENST00000435313 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
GLI2-206ENST00000435313 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.21
GLI2-206ENST00000435313 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
GLI2-206ENST00000435313 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
GLI2-206ENST00000435313 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
GLI2-206ENST00000435313 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
GLI2-206ENST00000435313 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
GLI2-206ENST00000435313 CECR2Q9BXF3 1484 aa27.29■■□□□ 1.96
GLI2-206ENST00000435313 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
GLI2-206ENST00000435313 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
GLI2-206ENST00000435313 BAZ1AQ9NRL2 1556 aaPredicted RBP27.11■■□□□ 1.93
GLI2-206ENST00000435313 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.92
GLI2-206ENST00000435313 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
GLI2-206ENST00000435313 MROH2BQ7Z745 1585 aa27.02■■□□□ 1.92
GLI2-206ENST00000435313 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
GLI2-206ENST00000435313 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
GLI2-206ENST00000435313 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
GLI2-206ENST00000435313 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
GLI2-206ENST00000435313 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
GLI2-206ENST00000435313 WIZO95785 1651 aa26.75■■□□□ 1.87
GLI2-206ENST00000435313 SUPT5HO00267 1087 aaKnown RBP26.7■■□□□ 1.86
GLI2-206ENST00000435313 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
GLI2-206ENST00000435313 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
GLI2-206ENST00000435313 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
GLI2-206ENST00000435313 HRCP23327 699 aa26.34■■□□□ 1.81
GLI2-206ENST00000435313 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
GLI2-206ENST00000435313 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
GLI2-206ENST00000435313 NESP48681 1621 aa26.05■■□□□ 1.76
GLI2-206ENST00000435313 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
GLI2-206ENST00000435313 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
GLI2-206ENST00000435313 CFTRP13569 1480 aa25.95■■□□□ 1.74
GLI2-206ENST00000435313 PDS5BQ9NTI5 1447 aa25.86■■□□□ 1.73
GLI2-206ENST00000435313 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
GLI2-206ENST00000435313 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
GLI2-206ENST00000435313 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
GLI2-206ENST00000435313 PRDM2Q13029 1718 aa25.67■■□□□ 1.7
GLI2-206ENST00000435313 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
GLI2-206ENST00000435313 MRC2Q9UBG0 1479 aa25.51■■□□□ 1.67
GLI2-206ENST00000435313 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
GLI2-206ENST00000435313 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.67
GLI2-206ENST00000435313 URB2Q14146 1524 aaKnown RBP25.43■■□□□ 1.66
GLI2-206ENST00000435313 ABCC8Q09428 1581 aa25.38■■□□□ 1.65
GLI2-206ENST00000435313 WDR62O43379 1518 aa25.38■■□□□ 1.65
GLI2-206ENST00000435313 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
GLI2-206ENST00000435313 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
GLI2-206ENST00000435313 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
GLI2-206ENST00000435313 DNMBPQ6XZF7 1577 aa25.32■■□□□ 1.64
GLI2-206ENST00000435313 CUX1P39880 1505 aa25.31■■□□□ 1.64
GLI2-206ENST00000435313 CUX2O14529 1486 aa25.3■■□□□ 1.64
GLI2-206ENST00000435313 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
GLI2-206ENST00000435313 MYT1Q01538 1121 aa25.19■■□□□ 1.62
GLI2-206ENST00000435313 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
GLI2-206ENST00000435313 TOP2BQ02880 1626 aa25.18■■□□□ 1.62
GLI2-206ENST00000435313 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
GLI2-206ENST00000435313 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
GLI2-206ENST00000435313 SOGA1O94964 1423 aa25.14■■□□□ 1.62
GLI2-206ENST00000435313 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
GLI2-206ENST00000435313 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
GLI2-206ENST00000435313 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
GLI2-206ENST00000435313 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
GLI2-206ENST00000435313 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
GLI2-206ENST00000435313 TARBP1Q13395 1621 aaKnown RBP25■■□□□ 1.59
GLI2-206ENST00000435313 TDRD9Q8NDG6 1382 aaKnown RBP24.98■■□□□ 1.59
GLI2-206ENST00000435313 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
GLI2-206ENST00000435313 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.58
GLI2-206ENST00000435313 ABCA10Q8WWZ4 1543 aa24.93■■□□□ 1.58
GLI2-206ENST00000435313 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
GLI2-206ENST00000435313 EIF4G3O43432 1585 aaKnown RBP24.83■■□□□ 1.57
GLI2-206ENST00000435313 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.56
GLI2-206ENST00000435313 KIF27Q86VH2 1401 aa24.8■■□□□ 1.56
GLI2-206ENST00000435313 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
GLI2-206ENST00000435313 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
GLI2-206ENST00000435313 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
GLI2-206ENST00000435313 FAM9AQ8IZU1 332 aaPredicted RBP24.69■■□□□ 1.54
GLI2-206ENST00000435313 FBLN2P98095 1184 aa24.68■■□□□ 1.54
GLI2-206ENST00000435313 ZEB1P37275 1124 aaPredicted RBP24.68■■□□□ 1.54
GLI2-206ENST00000435313 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
GLI2-206ENST00000435313 IGF1RP08069 1367 aa24.66■■□□□ 1.54
GLI2-206ENST00000435313 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
GLI2-206ENST00000435313 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
GLI2-206ENST00000435313 ERICH3Q5RHP9 1530 aa24.63■■□□□ 1.53
GLI2-206ENST00000435313 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
GLI2-206ENST00000435313 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
GLI2-206ENST00000435313 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
GLI2-206ENST00000435313 EEA1Q15075 1411 aa24.55■■□□□ 1.52
GLI2-206ENST00000435313 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
GLI2-206ENST00000435313 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
GLI2-206ENST00000435313 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
GLI2-206ENST00000435313 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
GLI2-206ENST00000435313 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
GLI2-206ENST00000435313 CUL7Q14999 1698 aa24.46■■□□□ 1.51
GLI2-206ENST00000435313 CHD1O14646 1710 aa24.44■■□□□ 1.5
GLI2-206ENST00000435313 GRIN2AQ12879 1464 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms