RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
LINC01055-201ENST00000435067 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
LINC01055-201ENST00000435067 ABCC9O60706 1549 aa20.36■□□□□ 0.85
LINC01055-201ENST00000435067 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
LINC01055-201ENST00000435067 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
LINC01055-201ENST00000435067 DCAF1Q9Y4B6 1507 aa19.94■□□□□ 0.78
LINC01055-201ENST00000435067 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
LINC01055-201ENST00000435067 NACADO15069 1562 aa19.81■□□□□ 0.76
LINC01055-201ENST00000435067 RB1CC1Q8TDY2 1594 aa19.73■□□□□ 0.75
LINC01055-201ENST00000435067 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
LINC01055-201ENST00000435067 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
LINC01055-201ENST00000435067 UNC13AQ9UPW8 1703 aa19.32■□□□□ 0.68
LINC01055-201ENST00000435067 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
LINC01055-201ENST00000435067 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.65
LINC01055-201ENST00000435067 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
LINC01055-201ENST00000435067 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
LINC01055-201ENST00000435067 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
LINC01055-201ENST00000435067 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
LINC01055-201ENST00000435067 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
LINC01055-201ENST00000435067 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
LINC01055-201ENST00000435067 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
LINC01055-201ENST00000435067 WIZO95785 1651 aa18.5■□□□□ 0.55
LINC01055-201ENST00000435067 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
LINC01055-201ENST00000435067 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
LINC01055-201ENST00000435067 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
LINC01055-201ENST00000435067 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
LINC01055-201ENST00000435067 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
LINC01055-201ENST00000435067 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
LINC01055-201ENST00000435067 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
LINC01055-201ENST00000435067 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
LINC01055-201ENST00000435067 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
LINC01055-201ENST00000435067 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
LINC01055-201ENST00000435067 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
LINC01055-201ENST00000435067 CFTRP13569 1480 aa17.81■□□□□ 0.44
LINC01055-201ENST00000435067 NESP48681 1621 aa17.78■□□□□ 0.44
LINC01055-201ENST00000435067 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
LINC01055-201ENST00000435067 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
LINC01055-201ENST00000435067 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
LINC01055-201ENST00000435067 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
LINC01055-201ENST00000435067 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
LINC01055-201ENST00000435067 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
LINC01055-201ENST00000435067 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
LINC01055-201ENST00000435067 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
LINC01055-201ENST00000435067 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
LINC01055-201ENST00000435067 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
LINC01055-201ENST00000435067 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
LINC01055-201ENST00000435067 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
LINC01055-201ENST00000435067 CUX1P39880 1505 aa17.46■□□□□ 0.39
LINC01055-201ENST00000435067 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
LINC01055-201ENST00000435067 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
LINC01055-201ENST00000435067 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
LINC01055-201ENST00000435067 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
LINC01055-201ENST00000435067 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
LINC01055-201ENST00000435067 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
LINC01055-201ENST00000435067 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.36
LINC01055-201ENST00000435067 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.36
LINC01055-201ENST00000435067 WDR62O43379 1518 aa17.3■□□□□ 0.36
LINC01055-201ENST00000435067 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
LINC01055-201ENST00000435067 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
LINC01055-201ENST00000435067 SOGA1O94964 1423 aa17.24■□□□□ 0.35
LINC01055-201ENST00000435067 FAM9AQ8IZU1 332 aaPredicted RBP17.24■□□□□ 0.35
LINC01055-201ENST00000435067 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
LINC01055-201ENST00000435067 CUX2O14529 1486 aa17.19■□□□□ 0.34
LINC01055-201ENST00000435067 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
LINC01055-201ENST00000435067 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
LINC01055-201ENST00000435067 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
LINC01055-201ENST00000435067 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
LINC01055-201ENST00000435067 WDR97A6NE52 1622 aa17.12■□□□□ 0.33
LINC01055-201ENST00000435067 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
LINC01055-201ENST00000435067 EEA1Q15075 1411 aa17.11■□□□□ 0.33
LINC01055-201ENST00000435067 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
LINC01055-201ENST00000435067 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
LINC01055-201ENST00000435067 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
LINC01055-201ENST00000435067 ABCA5Q8WWZ7 1642 aa17.04■□□□□ 0.32
LINC01055-201ENST00000435067 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
LINC01055-201ENST00000435067 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
LINC01055-201ENST00000435067 IGF1RP08069 1367 aa17.01■□□□□ 0.31
LINC01055-201ENST00000435067 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
LINC01055-201ENST00000435067 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
LINC01055-201ENST00000435067 PBRM1Q86U86 1689 aa16.96■□□□□ 0.31
LINC01055-201ENST00000435067 ERICH3Q5RHP9 1530 aa16.95■□□□□ 0.3
LINC01055-201ENST00000435067 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
LINC01055-201ENST00000435067 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
LINC01055-201ENST00000435067 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
LINC01055-201ENST00000435067 KIF21BO75037 1637 aa16.91■□□□□ 0.3
LINC01055-201ENST00000435067 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
LINC01055-201ENST00000435067 CUL7Q14999 1698 aa16.9■□□□□ 0.3
LINC01055-201ENST00000435067 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
LINC01055-201ENST00000435067 SNAPC4Q5SXM2 1469 aa16.87■□□□□ 0.29
LINC01055-201ENST00000435067 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
LINC01055-201ENST00000435067 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
LINC01055-201ENST00000435067 ADAMTS12P58397 1594 aa16.84■□□□□ 0.29
LINC01055-201ENST00000435067 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.28
LINC01055-201ENST00000435067 FBLN2P98095 1184 aa16.8■□□□□ 0.28
LINC01055-201ENST00000435067 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
LINC01055-201ENST00000435067 SYNJ2O15056 1496 aa16.77■□□□□ 0.28
LINC01055-201ENST00000435067 TNIKQ9UKE5 1360 aa16.76■□□□□ 0.27
LINC01055-201ENST00000435067 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
LINC01055-201ENST00000435067 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
LINC01055-201ENST00000435067 CHD1O14646 1710 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms