RNA–Protein interactions for RNA: ENST00000434977.1

PHACTR1-207, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 3

Gene PHACTR1, Length 760 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-207ENST00000434977 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
PHACTR1-207ENST00000434977 ABCC9O60706 1549 aa25.12■■□□□ 1.61
PHACTR1-207ENST00000434977 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
PHACTR1-207ENST00000434977 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
PHACTR1-207ENST00000434977 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
PHACTR1-207ENST00000434977 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
PHACTR1-207ENST00000434977 NACADO15069 1562 aa23.61■■□□□ 1.37
PHACTR1-207ENST00000434977 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
PHACTR1-207ENST00000434977 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.34
PHACTR1-207ENST00000434977 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
PHACTR1-207ENST00000434977 BICRAQ9NZM4 1560 aa23.19■■□□□ 1.3
PHACTR1-207ENST00000434977 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
PHACTR1-207ENST00000434977 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
PHACTR1-207ENST00000434977 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
PHACTR1-207ENST00000434977 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
PHACTR1-207ENST00000434977 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
PHACTR1-207ENST00000434977 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
PHACTR1-207ENST00000434977 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.2
PHACTR1-207ENST00000434977 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
PHACTR1-207ENST00000434977 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
PHACTR1-207ENST00000434977 SMARCA4P51532 1647 aa21.77■■□□□ 1.07
PHACTR1-207ENST00000434977 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
PHACTR1-207ENST00000434977 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
PHACTR1-207ENST00000434977 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
PHACTR1-207ENST00000434977 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
PHACTR1-207ENST00000434977 NESP48681 1621 aa21.6■■□□□ 1.05
PHACTR1-207ENST00000434977 BAZ1AQ9NRL2 1556 aaPredicted RBP21.6■■□□□ 1.05
PHACTR1-207ENST00000434977 CUX2O14529 1486 aa21.55■■□□□ 1.04
PHACTR1-207ENST00000434977 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
PHACTR1-207ENST00000434977 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
PHACTR1-207ENST00000434977 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
PHACTR1-207ENST00000434977 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
PHACTR1-207ENST00000434977 LAMC3Q9Y6N6 1575 aa21.32■■□□□ 1
PHACTR1-207ENST00000434977 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
PHACTR1-207ENST00000434977 WIZO95785 1651 aa21.29■■□□□ 1
PHACTR1-207ENST00000434977 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
PHACTR1-207ENST00000434977 CADPSQ9ULU8 1353 aa21.17■□□□□ 0.98
PHACTR1-207ENST00000434977 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
PHACTR1-207ENST00000434977 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
PHACTR1-207ENST00000434977 WDR62O43379 1518 aa20.99■□□□□ 0.95
PHACTR1-207ENST00000434977 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
PHACTR1-207ENST00000434977 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
PHACTR1-207ENST00000434977 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
PHACTR1-207ENST00000434977 CFTRP13569 1480 aa20.93■□□□□ 0.94
PHACTR1-207ENST00000434977 URB2Q14146 1524 aaKnown RBP20.81■□□□□ 0.92
PHACTR1-207ENST00000434977 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
PHACTR1-207ENST00000434977 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
PHACTR1-207ENST00000434977 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
PHACTR1-207ENST00000434977 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
PHACTR1-207ENST00000434977 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.89
PHACTR1-207ENST00000434977 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
PHACTR1-207ENST00000434977 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
PHACTR1-207ENST00000434977 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
PHACTR1-207ENST00000434977 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
PHACTR1-207ENST00000434977 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
PHACTR1-207ENST00000434977 TARBP1Q13395 1621 aaKnown RBP20.39■□□□□ 0.86
PHACTR1-207ENST00000434977 AQRO60306 1485 aaKnown RBP eCLIP20.39■□□□□ 0.85
PHACTR1-207ENST00000434977 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
PHACTR1-207ENST00000434977 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
PHACTR1-207ENST00000434977 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
PHACTR1-207ENST00000434977 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
PHACTR1-207ENST00000434977 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
PHACTR1-207ENST00000434977 CHD1O14646 1710 aa20.31■□□□□ 0.84
PHACTR1-207ENST00000434977 ARHGEF11O15085 1522 aa20.29■□□□□ 0.84
PHACTR1-207ENST00000434977 FBLN2P98095 1184 aa20.26■□□□□ 0.83
PHACTR1-207ENST00000434977 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
PHACTR1-207ENST00000434977 SOGA1O94964 1423 aa20.25■□□□□ 0.83
PHACTR1-207ENST00000434977 FGD5Q6ZNL6 1462 aa20.22■□□□□ 0.83
PHACTR1-207ENST00000434977 CUX1P39880 1505 aa20.22■□□□□ 0.83
PHACTR1-207ENST00000434977 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
PHACTR1-207ENST00000434977 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
PHACTR1-207ENST00000434977 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
PHACTR1-207ENST00000434977 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
PHACTR1-207ENST00000434977 WDR97A6NE52 1622 aa20.08■□□□□ 0.8
PHACTR1-207ENST00000434977 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
PHACTR1-207ENST00000434977 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
PHACTR1-207ENST00000434977 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
PHACTR1-207ENST00000434977 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
PHACTR1-207ENST00000434977 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
PHACTR1-207ENST00000434977 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
PHACTR1-207ENST00000434977 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
PHACTR1-207ENST00000434977 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
PHACTR1-207ENST00000434977 ABCA10Q8WWZ4 1543 aa19.96■□□□□ 0.79
PHACTR1-207ENST00000434977 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
PHACTR1-207ENST00000434977 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
PHACTR1-207ENST00000434977 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
PHACTR1-207ENST00000434977 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
PHACTR1-207ENST00000434977 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
PHACTR1-207ENST00000434977 ERCC6L2Q5T890 1561 aa19.81■□□□□ 0.76
PHACTR1-207ENST00000434977 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
PHACTR1-207ENST00000434977 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
PHACTR1-207ENST00000434977 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
PHACTR1-207ENST00000434977 NUP160Q12769 1436 aa19.73■□□□□ 0.75
PHACTR1-207ENST00000434977 FHAD1B1AJZ9 1412 aa19.71■□□□□ 0.75
PHACTR1-207ENST00000434977 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
PHACTR1-207ENST00000434977 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
PHACTR1-207ENST00000434977 PRG4Q92954 1404 aaPredicted RBP19.57■□□□□ 0.72
PHACTR1-207ENST00000434977 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
PHACTR1-207ENST00000434977 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
PHACTR1-207ENST00000434977 IGF1RP08069 1367 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms