RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 NISCHQ9Y2I1 1504 aa39.52■■■■□ 3.92
NUP50-210ENST00000434760 CCDC180Q9P1Z9 1646 aa35.48■■■■□ 3.27
NUP50-210ENST00000434760 ABCC9O60706 1549 aa34.93■■■■□ 3.18
NUP50-210ENST00000434760 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
NUP50-210ENST00000434760 NACADO15069 1562 aa33.34■■■□□ 2.93
NUP50-210ENST00000434760 MYO15BQ96JP2 1530 aa33.03■■■□□ 2.88
NUP50-210ENST00000434760 UNC13AQ9UPW8 1703 aa32.92■■■□□ 2.86
NUP50-210ENST00000434760 ZCCHC6Q5VYS8 1495 aaKnown RBP32.9■■■□□ 2.86
NUP50-210ENST00000434760 DCAF8L2P0C7V8 631 aa32.81■■■□□ 2.84
NUP50-210ENST00000434760 DCAF1Q9Y4B6 1507 aa32.73■■■□□ 2.83
NUP50-210ENST00000434760 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
NUP50-210ENST00000434760 PABPN1Q86U42 306 aaKnown RBP eCLIP32.43■■■□□ 2.78
NUP50-210ENST00000434760 DNAJC5BQ9UF47 199 aa32.4■■■□□ 2.78
NUP50-210ENST00000434760 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
NUP50-210ENST00000434760 SHROOM4Q9ULL8 1493 aa32.17■■■□□ 2.74
NUP50-210ENST00000434760 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
NUP50-210ENST00000434760 CC2D2AQ9P2K1 1620 aa31.68■■■□□ 2.66
NUP50-210ENST00000434760 CECR2Q9BXF3 1484 aa31.44■■■□□ 2.62
NUP50-210ENST00000434760 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
NUP50-210ENST00000434760 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
NUP50-210ENST00000434760 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
NUP50-210ENST00000434760 BAZ1AQ9NRL2 1556 aaPredicted RBP30.67■■■□□ 2.5
NUP50-210ENST00000434760 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
NUP50-210ENST00000434760 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
NUP50-210ENST00000434760 PEG3Q9GZU2 1588 aa30.57■■■□□ 2.48
NUP50-210ENST00000434760 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
NUP50-210ENST00000434760 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
NUP50-210ENST00000434760 NESP48681 1621 aa30.15■■■□□ 2.42
NUP50-210ENST00000434760 WIZO95785 1651 aa30.14■■■□□ 2.42
NUP50-210ENST00000434760 ERCC6Q03468 1493 aa30.1■■■□□ 2.41
NUP50-210ENST00000434760 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
NUP50-210ENST00000434760 CUX2O14529 1486 aa30.04■■■□□ 2.4
NUP50-210ENST00000434760 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
NUP50-210ENST00000434760 KIF21AQ7Z4S6 1674 aa29.9■■■□□ 2.38
NUP50-210ENST00000434760 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
NUP50-210ENST00000434760 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
NUP50-210ENST00000434760 CADPSQ9ULU8 1353 aa29.74■■■□□ 2.35
NUP50-210ENST00000434760 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
NUP50-210ENST00000434760 CFTRP13569 1480 aa29.55■■■□□ 2.32
NUP50-210ENST00000434760 WDR62O43379 1518 aa29.54■■■□□ 2.32
NUP50-210ENST00000434760 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
NUP50-210ENST00000434760 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
NUP50-210ENST00000434760 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
NUP50-210ENST00000434760 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
NUP50-210ENST00000434760 FANCD2Q9BXW9 1451 aa29.46■■■□□ 2.31
NUP50-210ENST00000434760 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
NUP50-210ENST00000434760 URB2Q14146 1524 aaKnown RBP29.25■■■□□ 2.27
NUP50-210ENST00000434760 TOPBP1Q92547 1522 aa28.97■■■□□ 2.23
NUP50-210ENST00000434760 DNMBPQ6XZF7 1577 aa28.94■■■□□ 2.22
NUP50-210ENST00000434760 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
NUP50-210ENST00000434760 ABCC8Q09428 1581 aa28.85■■■□□ 2.21
NUP50-210ENST00000434760 ZNF608Q9ULD9 1512 aaPredicted RBP28.8■■■□□ 2.2
NUP50-210ENST00000434760 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
NUP50-210ENST00000434760 EIF4G3O43432 1585 aaKnown RBP28.77■■■□□ 2.2
NUP50-210ENST00000434760 POLA1P09884 1462 aaPredicted RBP28.71■■■□□ 2.19
NUP50-210ENST00000434760 CUX1P39880 1505 aa28.63■■■□□ 2.17
NUP50-210ENST00000434760 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
NUP50-210ENST00000434760 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
NUP50-210ENST00000434760 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
NUP50-210ENST00000434760 RAD54L2Q9Y4B4 1467 aa28.53■■■□□ 2.16
NUP50-210ENST00000434760 CHD1O14646 1710 aa28.52■■■□□ 2.16
NUP50-210ENST00000434760 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.156e-6■□□□□ 8.5
NUP50-210ENST00000434760 OSCARQ8IYS5 282 aa28.48■■■□□ 2.15
NUP50-210ENST00000434760 SOGA1O94964 1423 aa28.43■■■□□ 2.14
NUP50-210ENST00000434760 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
NUP50-210ENST00000434760 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
NUP50-210ENST00000434760 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
NUP50-210ENST00000434760 TDRD9Q8NDG6 1382 aaKnown RBP28.34■■■□□ 2.13
NUP50-210ENST00000434760 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
NUP50-210ENST00000434760 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
NUP50-210ENST00000434760 SNAPC4Q5SXM2 1469 aa28.31■■■□□ 2.12
NUP50-210ENST00000434760 ABCA5Q8WWZ7 1642 aa28.31■■■□□ 2.12
NUP50-210ENST00000434760 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
NUP50-210ENST00000434760 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
NUP50-210ENST00000434760 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
NUP50-210ENST00000434760 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
NUP50-210ENST00000434760 MAGI1Q96QZ7 1491 aaPredicted RBP28.26■■■□□ 2.11
NUP50-210ENST00000434760 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
NUP50-210ENST00000434760 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
NUP50-210ENST00000434760 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
NUP50-210ENST00000434760 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
NUP50-210ENST00000434760 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
NUP50-210ENST00000434760 SYNJ2O15056 1496 aa28.13■■■□□ 2.09
NUP50-210ENST00000434760 FBLN2P98095 1184 aa28.06■■■□□ 2.08
NUP50-210ENST00000434760 ADAMTS12P58397 1594 aa28.06■■■□□ 2.08
NUP50-210ENST00000434760 ARAP1Q96P48 1450 aa28.03■■■□□ 2.08
NUP50-210ENST00000434760 CHMP7Q8WUX9 453 aaPredicted RBP27.94■■■□□ 2.06
NUP50-210ENST00000434760 ERICH3Q5RHP9 1530 aa27.92■■■□□ 2.06
NUP50-210ENST00000434760 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
NUP50-210ENST00000434760 CEP170Q5SW79 1584 aa27.87■■■□□ 2.05
NUP50-210ENST00000434760 NUP160Q12769 1436 aa27.84■■■□□ 2.05
NUP50-210ENST00000434760 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
NUP50-210ENST00000434760 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
NUP50-210ENST00000434760 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
NUP50-210ENST00000434760 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
NUP50-210ENST00000434760 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
NUP50-210ENST00000434760 CUL7Q14999 1698 aa27.64■■■□□ 2.02
NUP50-210ENST00000434760 KIF27Q86VH2 1401 aa27.58■■■□□ 2
NUP50-210ENST00000434760 IGF1RP08069 1367 aa27.5■■□□□ 1.99
NUP50-210ENST00000434760 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms