RNA–Protein interactions for RNA: ENST00000434703.5

SOX9-AS1-204, SOX9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene SOX9-AS1, Length 3,032 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-204ENST00000434703 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
SOX9-AS1-204ENST00000434703 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
SOX9-AS1-204ENST00000434703 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
SOX9-AS1-204ENST00000434703 DCAF8L2P0C7V8 631 aa18.49■□□□□ 0.55
SOX9-AS1-204ENST00000434703 ABCC9O60706 1549 aa18.34■□□□□ 0.53
SOX9-AS1-204ENST00000434703 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.53
SOX9-AS1-204ENST00000434703 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
SOX9-AS1-204ENST00000434703 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
SOX9-AS1-204ENST00000434703 NACADO15069 1562 aa17.97■□□□□ 0.47
SOX9-AS1-204ENST00000434703 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
SOX9-AS1-204ENST00000434703 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
SOX9-AS1-204ENST00000434703 SUPT5HO00267 1087 aaKnown RBP17.65■□□□□ 0.42
SOX9-AS1-204ENST00000434703 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
SOX9-AS1-204ENST00000434703 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
SOX9-AS1-204ENST00000434703 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
SOX9-AS1-204ENST00000434703 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
SOX9-AS1-204ENST00000434703 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
SOX9-AS1-204ENST00000434703 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
SOX9-AS1-204ENST00000434703 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
SOX9-AS1-204ENST00000434703 WIZO95785 1651 aa17.09■□□□□ 0.33
SOX9-AS1-204ENST00000434703 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
SOX9-AS1-204ENST00000434703 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
SOX9-AS1-204ENST00000434703 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
SOX9-AS1-204ENST00000434703 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
SOX9-AS1-204ENST00000434703 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
SOX9-AS1-204ENST00000434703 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
SOX9-AS1-204ENST00000434703 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
SOX9-AS1-204ENST00000434703 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
SOX9-AS1-204ENST00000434703 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
SOX9-AS1-204ENST00000434703 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
SOX9-AS1-204ENST00000434703 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
SOX9-AS1-204ENST00000434703 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
SOX9-AS1-204ENST00000434703 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
SOX9-AS1-204ENST00000434703 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
SOX9-AS1-204ENST00000434703 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
SOX9-AS1-204ENST00000434703 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
SOX9-AS1-204ENST00000434703 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
SOX9-AS1-204ENST00000434703 CFTRP13569 1480 aa16.27■□□□□ 0.2
SOX9-AS1-204ENST00000434703 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.19
SOX9-AS1-204ENST00000434703 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
SOX9-AS1-204ENST00000434703 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
SOX9-AS1-204ENST00000434703 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
SOX9-AS1-204ENST00000434703 SOGA1O94964 1423 aa16.15■□□□□ 0.18
SOX9-AS1-204ENST00000434703 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
SOX9-AS1-204ENST00000434703 NESP48681 1621 aa16.14■□□□□ 0.17
SOX9-AS1-204ENST00000434703 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
SOX9-AS1-204ENST00000434703 RUSC2Q8N2Y8 1516 aa16.11■□□□□ 0.17
SOX9-AS1-204ENST00000434703 CUX1P39880 1505 aa16.1■□□□□ 0.17
SOX9-AS1-204ENST00000434703 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
SOX9-AS1-204ENST00000434703 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
SOX9-AS1-204ENST00000434703 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.15
SOX9-AS1-204ENST00000434703 EEA1Q15075 1411 aa16■□□□□ 0.15
SOX9-AS1-204ENST00000434703 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
SOX9-AS1-204ENST00000434703 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
SOX9-AS1-204ENST00000434703 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
SOX9-AS1-204ENST00000434703 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
SOX9-AS1-204ENST00000434703 DNMBPQ6XZF7 1577 aa15.88■□□□□ 0.13
SOX9-AS1-204ENST00000434703 TOPBP1Q92547 1522 aa15.88■□□□□ 0.13
SOX9-AS1-204ENST00000434703 KIF21AQ7Z4S6 1674 aa15.88■□□□□ 0.13
SOX9-AS1-204ENST00000434703 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
SOX9-AS1-204ENST00000434703 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
SOX9-AS1-204ENST00000434703 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
SOX9-AS1-204ENST00000434703 GOLGA3Q08378 1498 aa15.83■□□□□ 0.13
SOX9-AS1-204ENST00000434703 CUX2O14529 1486 aa15.82■□□□□ 0.12
SOX9-AS1-204ENST00000434703 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
SOX9-AS1-204ENST00000434703 KIF21BO75037 1637 aa15.82■□□□□ 0.12
SOX9-AS1-204ENST00000434703 RAD54L2Q9Y4B4 1467 aa15.81■□□□□ 0.12
SOX9-AS1-204ENST00000434703 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
SOX9-AS1-204ENST00000434703 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
SOX9-AS1-204ENST00000434703 PRXQ9BXM0 1461 aa15.76■□□□□ 0.11
SOX9-AS1-204ENST00000434703 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
SOX9-AS1-204ENST00000434703 IGF1RP08069 1367 aa15.73■□□□□ 0.11
SOX9-AS1-204ENST00000434703 ABCA10Q8WWZ4 1543 aa15.73■□□□□ 0.11
SOX9-AS1-204ENST00000434703 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
SOX9-AS1-204ENST00000434703 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
SOX9-AS1-204ENST00000434703 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
SOX9-AS1-204ENST00000434703 TDRD9Q8NDG6 1382 aaKnown RBP15.66■□□□□ 0.1
SOX9-AS1-204ENST00000434703 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
SOX9-AS1-204ENST00000434703 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
SOX9-AS1-204ENST00000434703 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
SOX9-AS1-204ENST00000434703 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
SOX9-AS1-204ENST00000434703 WDR62O43379 1518 aa15.62■□□□□ 0.09
SOX9-AS1-204ENST00000434703 CLIP1P30622 1438 aa15.62■□□□□ 0.09
SOX9-AS1-204ENST00000434703 ABCA5Q8WWZ7 1642 aa15.6■□□□□ 0.09
SOX9-AS1-204ENST00000434703 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
SOX9-AS1-204ENST00000434703 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
SOX9-AS1-204ENST00000434703 PPARGC1BQ86YN6 1023 aaKnown RBP15.58■□□□□ 0.09
SOX9-AS1-204ENST00000434703 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.08
SOX9-AS1-204ENST00000434703 AQRO60306 1485 aaKnown RBP eCLIP15.55■□□□□ 0.08
SOX9-AS1-204ENST00000434703 CUL7Q14999 1698 aa15.53■□□□□ 0.08
SOX9-AS1-204ENST00000434703 IFT140Q96RY7 1462 aa15.52■□□□□ 0.08
SOX9-AS1-204ENST00000434703 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.08
SOX9-AS1-204ENST00000434703 TRIM26Q12899 539 aaPredicted RBP15.5■□□□□ 0.07
SOX9-AS1-204ENST00000434703 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
SOX9-AS1-204ENST00000434703 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
SOX9-AS1-204ENST00000434703 ARAP1Q96P48 1450 aa15.46■□□□□ 0.07
SOX9-AS1-204ENST00000434703 TTBK1Q5TCY1 1321 aaPredicted RBP15.45■□□□□ 0.06
SOX9-AS1-204ENST00000434703 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
SOX9-AS1-204ENST00000434703 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
SOX9-AS1-204ENST00000434703 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms