RNA–Protein interactions for RNA: ENST00000434648.5

CAPN2-203, Transcript of calpain 2, humanhuman

TSL 5

Gene CAPN2, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-203ENST00000434648 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
CAPN2-203ENST00000434648 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
CAPN2-203ENST00000434648 AEBP2Q6ZN18 517 aaPredicted RBP30.74■■■□□ 2.51
CAPN2-203ENST00000434648 ABCC9O60706 1549 aa28.23■■■□□ 2.11
CAPN2-203ENST00000434648 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
CAPN2-203ENST00000434648 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
CAPN2-203ENST00000434648 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
CAPN2-203ENST00000434648 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
CAPN2-203ENST00000434648 NACADO15069 1562 aa26.45■■□□□ 1.82
CAPN2-203ENST00000434648 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
CAPN2-203ENST00000434648 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
CAPN2-203ENST00000434648 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
CAPN2-203ENST00000434648 SENP3Q9H4L4 574 aaPredicted RBP25.98■■□□□ 1.75
CAPN2-203ENST00000434648 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
CAPN2-203ENST00000434648 BICRAQ9NZM4 1560 aa25.97■■□□□ 1.75
CAPN2-203ENST00000434648 ZCCHC6Q5VYS8 1495 aaKnown RBP25.57■■□□□ 1.68
CAPN2-203ENST00000434648 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
CAPN2-203ENST00000434648 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
CAPN2-203ENST00000434648 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
CAPN2-203ENST00000434648 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
CAPN2-203ENST00000434648 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
CAPN2-203ENST00000434648 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
CAPN2-203ENST00000434648 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
CAPN2-203ENST00000434648 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
CAPN2-203ENST00000434648 CUX2O14529 1486 aa24.45■■□□□ 1.5
CAPN2-203ENST00000434648 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
CAPN2-203ENST00000434648 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
CAPN2-203ENST00000434648 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
CAPN2-203ENST00000434648 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
CAPN2-203ENST00000434648 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
CAPN2-203ENST00000434648 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
CAPN2-203ENST00000434648 NESP48681 1621 aa24.17■■□□□ 1.46
CAPN2-203ENST00000434648 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
CAPN2-203ENST00000434648 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
CAPN2-203ENST00000434648 FOXD1Q16676 465 aa24.01■■□□□ 1.43
CAPN2-203ENST00000434648 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
CAPN2-203ENST00000434648 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
CAPN2-203ENST00000434648 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
CAPN2-203ENST00000434648 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
CAPN2-203ENST00000434648 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.4
CAPN2-203ENST00000434648 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
CAPN2-203ENST00000434648 ADRA2BP18089 450 aa23.74■■□□□ 1.39
CAPN2-203ENST00000434648 PPP6R1Q9UPN7 881 aa23.69■■□□□ 1.38
CAPN2-203ENST00000434648 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
CAPN2-203ENST00000434648 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
CAPN2-203ENST00000434648 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
CAPN2-203ENST00000434648 WDR62O43379 1518 aa23.57■■□□□ 1.36
CAPN2-203ENST00000434648 WIZO95785 1651 aa23.54■■□□□ 1.36
CAPN2-203ENST00000434648 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
CAPN2-203ENST00000434648 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
CAPN2-203ENST00000434648 CFTRP13569 1480 aa23.34■■□□□ 1.33
CAPN2-203ENST00000434648 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
CAPN2-203ENST00000434648 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
CAPN2-203ENST00000434648 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
CAPN2-203ENST00000434648 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
CAPN2-203ENST00000434648 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
CAPN2-203ENST00000434648 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.28
CAPN2-203ENST00000434648 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.28
CAPN2-203ENST00000434648 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.28
CAPN2-203ENST00000434648 ZNF608Q9ULD9 1512 aaPredicted RBP23.02■■□□□ 1.28
CAPN2-203ENST00000434648 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
CAPN2-203ENST00000434648 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
CAPN2-203ENST00000434648 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
CAPN2-203ENST00000434648 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
CAPN2-203ENST00000434648 PIAS4Q8N2W9 510 aaPredicted RBP22.86■■□□□ 1.25
CAPN2-203ENST00000434648 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
CAPN2-203ENST00000434648 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
CAPN2-203ENST00000434648 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
CAPN2-203ENST00000434648 CYB5RLQ6IPT4 315 aa22.78■■□□□ 1.24
CAPN2-203ENST00000434648 KCNA4P22459 653 aa22.77■■□□□ 1.24
CAPN2-203ENST00000434648 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.241e-8■■■■■ 36.7
CAPN2-203ENST00000434648 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
CAPN2-203ENST00000434648 CHD1O14646 1710 aa22.74■■□□□ 1.23
CAPN2-203ENST00000434648 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
CAPN2-203ENST00000434648 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
CAPN2-203ENST00000434648 FBLN2P98095 1184 aa22.67■■□□□ 1.22
CAPN2-203ENST00000434648 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
CAPN2-203ENST00000434648 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
CAPN2-203ENST00000434648 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
CAPN2-203ENST00000434648 SOGA1O94964 1423 aa22.57■■□□□ 1.2
CAPN2-203ENST00000434648 SNAPC4Q5SXM2 1469 aa22.51■■□□□ 1.19
CAPN2-203ENST00000434648 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
CAPN2-203ENST00000434648 CLASP1Q7Z460 1538 aa22.48■■□□□ 1.19
CAPN2-203ENST00000434648 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
CAPN2-203ENST00000434648 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
CAPN2-203ENST00000434648 PPP4R3CPQ6ZMV5 832 aa22.43■■□□□ 1.18
CAPN2-203ENST00000434648 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
CAPN2-203ENST00000434648 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
CAPN2-203ENST00000434648 CUX1P39880 1505 aa22.41■■□□□ 1.18
CAPN2-203ENST00000434648 GRIN2BQ13224 1484 aa22.4■■□□□ 1.18
CAPN2-203ENST00000434648 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
CAPN2-203ENST00000434648 PBRM1Q86U86 1689 aa22.28■■□□□ 1.16
CAPN2-203ENST00000434648 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
CAPN2-203ENST00000434648 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
CAPN2-203ENST00000434648 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
CAPN2-203ENST00000434648 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
CAPN2-203ENST00000434648 GRIN2AQ12879 1464 aa22.11■■□□□ 1.13
CAPN2-203ENST00000434648 EHMT2Q96KQ7 1210 aa22.11■■□□□ 1.13
CAPN2-203ENST00000434648 NCBP3Q53F19 620 aaKnown RBP22.07■■□□□ 1.12
CAPN2-203ENST00000434648 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms