RNA–Protein interactions for RNA: ENST00000434520.5

C1orf228-209, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 3

Gene C1orf228, Length 330 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-209ENST00000434520 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
C1orf228-209ENST00000434520 CCDC180Q9P1Z9 1646 aa30.27■■■□□ 2.44
C1orf228-209ENST00000434520 ABCC9O60706 1549 aa30.06■■■□□ 2.4
C1orf228-209ENST00000434520 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
C1orf228-209ENST00000434520 NACADO15069 1562 aa28.55■■■□□ 2.16
C1orf228-209ENST00000434520 MYO15BQ96JP2 1530 aa28.19■■■□□ 2.1
C1orf228-209ENST00000434520 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
C1orf228-209ENST00000434520 UNC13AQ9UPW8 1703 aa28.14■■■□□ 2.1
C1orf228-209ENST00000434520 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
C1orf228-209ENST00000434520 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
C1orf228-209ENST00000434520 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
C1orf228-209ENST00000434520 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
C1orf228-209ENST00000434520 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
C1orf228-209ENST00000434520 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
C1orf228-209ENST00000434520 SCRIBQ14160 1630 aa27.45■■□□□ 1.99
C1orf228-209ENST00000434520 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
C1orf228-209ENST00000434520 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
C1orf228-209ENST00000434520 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
C1orf228-209ENST00000434520 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
C1orf228-209ENST00000434520 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
C1orf228-209ENST00000434520 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
C1orf228-209ENST00000434520 SMARCA2P51531 1590 aa26.2■■□□□ 1.78
C1orf228-209ENST00000434520 HMGXB3Q12766 1538 aa26.17■■□□□ 1.78
C1orf228-209ENST00000434520 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
C1orf228-209ENST00000434520 PEG3Q9GZU2 1588 aa26.02■■□□□ 1.76
C1orf228-209ENST00000434520 CUX2O14529 1486 aa26■■□□□ 1.75
C1orf228-209ENST00000434520 ERCC6Q03468 1493 aa25.99■■□□□ 1.75
C1orf228-209ENST00000434520 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
C1orf228-209ENST00000434520 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
C1orf228-209ENST00000434520 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
C1orf228-209ENST00000434520 NESP48681 1621 aa25.82■■□□□ 1.72
C1orf228-209ENST00000434520 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
C1orf228-209ENST00000434520 THOC2Q8NI27 1593 aaKnown RBP25.66■■□□□ 1.7
C1orf228-209ENST00000434520 KIF21AQ7Z4S6 1674 aa25.6■■□□□ 1.69
C1orf228-209ENST00000434520 WIZO95785 1651 aa25.57■■□□□ 1.68
C1orf228-209ENST00000434520 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
C1orf228-209ENST00000434520 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
C1orf228-209ENST00000434520 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
C1orf228-209ENST00000434520 WDR62O43379 1518 aa25.31■■□□□ 1.64
C1orf228-209ENST00000434520 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
C1orf228-209ENST00000434520 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
C1orf228-209ENST00000434520 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
C1orf228-209ENST00000434520 CFTRP13569 1480 aa25.21■■□□□ 1.63
C1orf228-209ENST00000434520 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
C1orf228-209ENST00000434520 PRDM2Q13029 1718 aa25.14■■□□□ 1.61
C1orf228-209ENST00000434520 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
C1orf228-209ENST00000434520 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
C1orf228-209ENST00000434520 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
C1orf228-209ENST00000434520 ABCC8Q09428 1581 aa24.74■■□□□ 1.55
C1orf228-209ENST00000434520 TOPBP1Q92547 1522 aa24.73■■□□□ 1.55
C1orf228-209ENST00000434520 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
C1orf228-209ENST00000434520 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
C1orf228-209ENST00000434520 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
C1orf228-209ENST00000434520 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
C1orf228-209ENST00000434520 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
C1orf228-209ENST00000434520 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
C1orf228-209ENST00000434520 RIMBP3CA6NJZ7 1639 aa24.47■■□□□ 1.51
C1orf228-209ENST00000434520 RIMBP3BA6NNM3 1639 aa24.47■■□□□ 1.51
C1orf228-209ENST00000434520 RIMBP3Q9UFD9 1639 aa24.47■■□□□ 1.51
C1orf228-209ENST00000434520 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
C1orf228-209ENST00000434520 CHD1O14646 1710 aa24.44■■□□□ 1.5
C1orf228-209ENST00000434520 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.5
C1orf228-209ENST00000434520 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
C1orf228-209ENST00000434520 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
C1orf228-209ENST00000434520 SOGA1O94964 1423 aa24.33■■□□□ 1.49
C1orf228-209ENST00000434520 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
C1orf228-209ENST00000434520 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
C1orf228-209ENST00000434520 CUX1P39880 1505 aa24.3■■□□□ 1.48
C1orf228-209ENST00000434520 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
C1orf228-209ENST00000434520 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.47
C1orf228-209ENST00000434520 MAGI1Q96QZ7 1491 aaPredicted RBP24.19■■□□□ 1.46
C1orf228-209ENST00000434520 FBLN2P98095 1184 aa24.19■■□□□ 1.46
C1orf228-209ENST00000434520 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
C1orf228-209ENST00000434520 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
C1orf228-209ENST00000434520 SYNJ1O43426 1573 aa24.13■■□□□ 1.45
C1orf228-209ENST00000434520 CLASP1Q7Z460 1538 aa24.13■■□□□ 1.45
C1orf228-209ENST00000434520 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
C1orf228-209ENST00000434520 SYNJ2O15056 1496 aa24.09■■□□□ 1.45
C1orf228-209ENST00000434520 CYB5RLQ6IPT4 315 aa24.09■■□□□ 1.45
C1orf228-209ENST00000434520 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
C1orf228-209ENST00000434520 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
C1orf228-209ENST00000434520 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
C1orf228-209ENST00000434520 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
C1orf228-209ENST00000434520 CHMP7Q8WUX9 453 aaPredicted RBP24.06■■□□□ 1.44
C1orf228-209ENST00000434520 BIVM-ERCC5R4GMW8 1640 aa24■■□□□ 1.43
C1orf228-209ENST00000434520 TOP2BQ02880 1626 aa23.97■■□□□ 1.43
C1orf228-209ENST00000434520 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
C1orf228-209ENST00000434520 ADAMTS12P58397 1594 aa23.89■■□□□ 1.41
C1orf228-209ENST00000434520 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
C1orf228-209ENST00000434520 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
C1orf228-209ENST00000434520 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
C1orf228-209ENST00000434520 NUP160Q12769 1436 aa23.78■■□□□ 1.4
C1orf228-209ENST00000434520 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
C1orf228-209ENST00000434520 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
C1orf228-209ENST00000434520 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
C1orf228-209ENST00000434520 ERCC6L2Q5T890 1561 aa23.68■■□□□ 1.38
C1orf228-209ENST00000434520 RUSC2Q8N2Y8 1516 aa23.55■■□□□ 1.36
C1orf228-209ENST00000434520 CUL7Q14999 1698 aa23.5■■□□□ 1.35
C1orf228-209ENST00000434520 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
C1orf228-209ENST00000434520 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms