RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
EDEM1-202ENST00000434243 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
EDEM1-202ENST00000434243 ABCC9O60706 1549 aa29.24■■■□□ 2.27
EDEM1-202ENST00000434243 DCAF8L2P0C7V8 631 aa27.86■■■□□ 2.05
EDEM1-202ENST00000434243 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
EDEM1-202ENST00000434243 NACADO15069 1562 aa27.68■■■□□ 2.02
EDEM1-202ENST00000434243 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.97
EDEM1-202ENST00000434243 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
EDEM1-202ENST00000434243 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
EDEM1-202ENST00000434243 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
EDEM1-202ENST00000434243 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
EDEM1-202ENST00000434243 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
EDEM1-202ENST00000434243 BICRAQ9NZM4 1560 aa26.96■■□□□ 1.91
EDEM1-202ENST00000434243 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
EDEM1-202ENST00000434243 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
EDEM1-202ENST00000434243 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.81
EDEM1-202ENST00000434243 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.8
EDEM1-202ENST00000434243 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
EDEM1-202ENST00000434243 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
EDEM1-202ENST00000434243 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
EDEM1-202ENST00000434243 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
EDEM1-202ENST00000434243 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
EDEM1-202ENST00000434243 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
EDEM1-202ENST00000434243 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
EDEM1-202ENST00000434243 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
EDEM1-202ENST00000434243 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
EDEM1-202ENST00000434243 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
EDEM1-202ENST00000434243 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
EDEM1-202ENST00000434243 NESP48681 1621 aa25.14■■□□□ 1.61
EDEM1-202ENST00000434243 CUX2O14529 1486 aa25.05■■□□□ 1.6
EDEM1-202ENST00000434243 WIZO95785 1651 aa24.98■■□□□ 1.59
EDEM1-202ENST00000434243 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
EDEM1-202ENST00000434243 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
EDEM1-202ENST00000434243 PDS5BQ9NTI5 1447 aa24.87■■□□□ 1.57
EDEM1-202ENST00000434243 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
EDEM1-202ENST00000434243 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
EDEM1-202ENST00000434243 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
EDEM1-202ENST00000434243 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
EDEM1-202ENST00000434243 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
EDEM1-202ENST00000434243 MRC2Q9UBG0 1479 aa24.61■■□□□ 1.53
EDEM1-202ENST00000434243 CFTRP13569 1480 aa24.58■■□□□ 1.52
EDEM1-202ENST00000434243 FANCD2Q9BXW9 1451 aa24.57■■□□□ 1.52
EDEM1-202ENST00000434243 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
EDEM1-202ENST00000434243 WDR62O43379 1518 aa24.5■■□□□ 1.51
EDEM1-202ENST00000434243 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
EDEM1-202ENST00000434243 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
EDEM1-202ENST00000434243 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
EDEM1-202ENST00000434243 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
EDEM1-202ENST00000434243 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
EDEM1-202ENST00000434243 IFT140Q96RY7 1462 aa24.07■■□□□ 1.44
EDEM1-202ENST00000434243 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
EDEM1-202ENST00000434243 OSCARQ8IYS5 282 aa24.05■■□□□ 1.44
EDEM1-202ENST00000434243 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
EDEM1-202ENST00000434243 DNMBPQ6XZF7 1577 aa24■■□□□ 1.43
EDEM1-202ENST00000434243 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
EDEM1-202ENST00000434243 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
EDEM1-202ENST00000434243 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.415e-7■■■■■ 28.2
EDEM1-202ENST00000434243 SOGA1O94964 1423 aa23.83■■□□□ 1.4
EDEM1-202ENST00000434243 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
EDEM1-202ENST00000434243 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
EDEM1-202ENST00000434243 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
EDEM1-202ENST00000434243 FBLN2P98095 1184 aa23.78■■□□□ 1.4
EDEM1-202ENST00000434243 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
EDEM1-202ENST00000434243 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
EDEM1-202ENST00000434243 CUX1P39880 1505 aa23.74■■□□□ 1.39
EDEM1-202ENST00000434243 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
EDEM1-202ENST00000434243 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
EDEM1-202ENST00000434243 CHD1O14646 1710 aa23.58■■□□□ 1.37
EDEM1-202ENST00000434243 RIMBP3CA6NJZ7 1639 aa23.58■■□□□ 1.36
EDEM1-202ENST00000434243 RIMBP3BA6NNM3 1639 aa23.58■■□□□ 1.36
EDEM1-202ENST00000434243 RIMBP3Q9UFD9 1639 aa23.58■■□□□ 1.36
EDEM1-202ENST00000434243 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
EDEM1-202ENST00000434243 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
EDEM1-202ENST00000434243 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
EDEM1-202ENST00000434243 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
EDEM1-202ENST00000434243 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
EDEM1-202ENST00000434243 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
EDEM1-202ENST00000434243 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
EDEM1-202ENST00000434243 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
EDEM1-202ENST00000434243 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
EDEM1-202ENST00000434243 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
EDEM1-202ENST00000434243 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
EDEM1-202ENST00000434243 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
EDEM1-202ENST00000434243 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
EDEM1-202ENST00000434243 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
EDEM1-202ENST00000434243 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
EDEM1-202ENST00000434243 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
EDEM1-202ENST00000434243 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
EDEM1-202ENST00000434243 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
EDEM1-202ENST00000434243 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
EDEM1-202ENST00000434243 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
EDEM1-202ENST00000434243 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
EDEM1-202ENST00000434243 NUP160Q12769 1436 aa23.14■■□□□ 1.29
EDEM1-202ENST00000434243 CEP170Q5SW79 1584 aa23.11■■□□□ 1.29
EDEM1-202ENST00000434243 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
EDEM1-202ENST00000434243 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
EDEM1-202ENST00000434243 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
EDEM1-202ENST00000434243 IGF1RP08069 1367 aa23.01■■□□□ 1.27
EDEM1-202ENST00000434243 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
EDEM1-202ENST00000434243 SHROOM2Q13796 1616 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms