RNA–Protein interactions for RNA: ENST00000434205.7

TSEN54-202, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-202ENST00000434205 NISCHQ9Y2I1 1504 aa40.55■■■■■ 4.08
TSEN54-202ENST00000434205 CCDC180Q9P1Z9 1646 aa36.19■■■■□ 3.38
TSEN54-202ENST00000434205 ABCC9O60706 1549 aa35.37■■■■□ 3.25
TSEN54-202ENST00000434205 RB1CC1Q8TDY2 1594 aa34.05■■■■□ 3.04
TSEN54-202ENST00000434205 NACADO15069 1562 aa33.98■■■■□ 3.03
TSEN54-202ENST00000434205 ZCCHC6Q5VYS8 1495 aaKnown RBP33.8■■■■□ 3
TSEN54-202ENST00000434205 MYO15BQ96JP2 1530 aa33.77■■■■□ 3
TSEN54-202ENST00000434205 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
TSEN54-202ENST00000434205 DCAF1Q9Y4B6 1507 aa33.58■■■□□ 2.97
TSEN54-202ENST00000434205 UNC13AQ9UPW8 1703 aa33.34■■■□□ 2.93
TSEN54-202ENST00000434205 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
TSEN54-202ENST00000434205 SCRIBQ14160 1630 aa32.96■■■□□ 2.87
TSEN54-202ENST00000434205 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
TSEN54-202ENST00000434205 SHROOM4Q9ULL8 1493 aa32.71■■■□□ 2.83
TSEN54-202ENST00000434205 DNAJC5BQ9UF47 199 aa32.48■■■□□ 2.79
TSEN54-202ENST00000434205 EIF4G1Q04637 1599 aaKnown RBP32.17■■■□□ 2.74
TSEN54-202ENST00000434205 CC2D2AQ9P2K1 1620 aa32.05■■■□□ 2.72
TSEN54-202ENST00000434205 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
TSEN54-202ENST00000434205 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
TSEN54-202ENST00000434205 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
TSEN54-202ENST00000434205 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
TSEN54-202ENST00000434205 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
TSEN54-202ENST00000434205 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
TSEN54-202ENST00000434205 MROH2BQ7Z745 1585 aa31.25■■■□□ 2.59
TSEN54-202ENST00000434205 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
TSEN54-202ENST00000434205 HMGXB3Q12766 1538 aa31.23■■■□□ 2.59
TSEN54-202ENST00000434205 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
TSEN54-202ENST00000434205 WIZO95785 1651 aa30.93■■■□□ 2.54
TSEN54-202ENST00000434205 RSF1Q96T23 1441 aaPredicted RBP30.82■■■□□ 2.52
TSEN54-202ENST00000434205 TOP2AP11388 1531 aaKnown RBP30.61■■■□□ 2.49
TSEN54-202ENST00000434205 NESP48681 1621 aa30.6■■■□□ 2.49
TSEN54-202ENST00000434205 LAMC3Q9Y6N6 1575 aa30.57■■■□□ 2.48
TSEN54-202ENST00000434205 ERCC6Q03468 1493 aa30.51■■■□□ 2.48
TSEN54-202ENST00000434205 CADPSQ9ULU8 1353 aa30.37■■■□□ 2.45
TSEN54-202ENST00000434205 KIF21AQ7Z4S6 1674 aa30.31■■■□□ 2.44
TSEN54-202ENST00000434205 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
TSEN54-202ENST00000434205 CUX2O14529 1486 aa30.26■■■□□ 2.44
TSEN54-202ENST00000434205 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
TSEN54-202ENST00000434205 CFTRP13569 1480 aa30.21■■■□□ 2.43
TSEN54-202ENST00000434205 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
TSEN54-202ENST00000434205 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
TSEN54-202ENST00000434205 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
TSEN54-202ENST00000434205 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
TSEN54-202ENST00000434205 MRC2Q9UBG0 1479 aa30.03■■■□□ 2.4
TSEN54-202ENST00000434205 WDR62O43379 1518 aa29.97■■■□□ 2.39
TSEN54-202ENST00000434205 SUPT5HO00267 1087 aaKnown RBP29.85■■■□□ 2.37
TSEN54-202ENST00000434205 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
TSEN54-202ENST00000434205 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
TSEN54-202ENST00000434205 DNMBPQ6XZF7 1577 aa29.57■■■□□ 2.32
TSEN54-202ENST00000434205 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
TSEN54-202ENST00000434205 IFT140Q96RY7 1462 aa29.42■■■□□ 2.3
TSEN54-202ENST00000434205 DNAJC5Q9H3Z4 198 aa29.33■■■□□ 2.29
TSEN54-202ENST00000434205 POLA1P09884 1462 aaPredicted RBP29.33■■■□□ 2.29
TSEN54-202ENST00000434205 CUX1P39880 1505 aa29.33■■■□□ 2.29
TSEN54-202ENST00000434205 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
TSEN54-202ENST00000434205 ZNF608Q9ULD9 1512 aaPredicted RBP29.28■■■□□ 2.28
TSEN54-202ENST00000434205 EIF4G3O43432 1585 aaKnown RBP29.24■■■□□ 2.27
TSEN54-202ENST00000434205 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
TSEN54-202ENST00000434205 RAD54L2Q9Y4B4 1467 aa29.16■■■□□ 2.26
TSEN54-202ENST00000434205 SOGA1O94964 1423 aa29.14■■■□□ 2.26
TSEN54-202ENST00000434205 BIVM-ERCC5R4GMW8 1640 aa29.11■■■□□ 2.25
TSEN54-202ENST00000434205 WDR97A6NE52 1622 aa29.1■■■□□ 2.25
TSEN54-202ENST00000434205 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
TSEN54-202ENST00000434205 TOP2BQ02880 1626 aa29.08■■■□□ 2.25
TSEN54-202ENST00000434205 SYNJ1O43426 1573 aa29.06■■■□□ 2.24
TSEN54-202ENST00000434205 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.242e-6■■■■■ 30.4
TSEN54-202ENST00000434205 TDRD9Q8NDG6 1382 aaKnown RBP28.98■■■□□ 2.23
TSEN54-202ENST00000434205 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
TSEN54-202ENST00000434205 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
TSEN54-202ENST00000434205 PBRM1Q86U86 1689 aa28.89■■■□□ 2.21
TSEN54-202ENST00000434205 CHD1O14646 1710 aa28.89■■■□□ 2.21
TSEN54-202ENST00000434205 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
TSEN54-202ENST00000434205 GRIN2BQ13224 1484 aa28.86■■■□□ 2.21
TSEN54-202ENST00000434205 SNAPC4Q5SXM2 1469 aa28.85■■■□□ 2.21
TSEN54-202ENST00000434205 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
TSEN54-202ENST00000434205 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
TSEN54-202ENST00000434205 SYNJ2O15056 1496 aa28.7■■■□□ 2.18
TSEN54-202ENST00000434205 FBLN2P98095 1184 aa28.66■■■□□ 2.18
TSEN54-202ENST00000434205 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
TSEN54-202ENST00000434205 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
TSEN54-202ENST00000434205 CHMP7Q8WUX9 453 aaPredicted RBP28.59■■■□□ 2.17
TSEN54-202ENST00000434205 CLASP1Q7Z460 1538 aa28.56■■■□□ 2.16
TSEN54-202ENST00000434205 RIMBP3CA6NJZ7 1639 aa28.55■■■□□ 2.16
TSEN54-202ENST00000434205 RIMBP3BA6NNM3 1639 aa28.55■■■□□ 2.16
TSEN54-202ENST00000434205 RIMBP3Q9UFD9 1639 aa28.55■■■□□ 2.16
TSEN54-202ENST00000434205 ARHGEF11O15085 1522 aa28.52■■■□□ 2.16
TSEN54-202ENST00000434205 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
TSEN54-202ENST00000434205 FHAD1B1AJZ9 1412 aa28.51■■■□□ 2.15
TSEN54-202ENST00000434205 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
TSEN54-202ENST00000434205 CEP170Q5SW79 1584 aa28.4■■■□□ 2.14
TSEN54-202ENST00000434205 CUL7Q14999 1698 aa28.38■■■□□ 2.13
TSEN54-202ENST00000434205 NUP160Q12769 1436 aa28.38■■■□□ 2.13
TSEN54-202ENST00000434205 IGF1RP08069 1367 aa28.32■■■□□ 2.12
TSEN54-202ENST00000434205 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
TSEN54-202ENST00000434205 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
TSEN54-202ENST00000434205 SHROOM2Q13796 1616 aa28.23■■■□□ 2.11
TSEN54-202ENST00000434205 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
TSEN54-202ENST00000434205 CARMIL1Q5VZK9 1371 aa28.16■■■□□ 2.1
TSEN54-202ENST00000434205 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
TSEN54-202ENST00000434205 CYB5RLQ6IPT4 315 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms