RNA–Protein interactions for RNA: ENST00000434195.1

HLCS-IT1-201, HLCS intronic transcript 1, humanhuman

TSL 2 BASIC

Gene HLCS-IT1, Length 531 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-IT1-201ENST00000434195 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
HLCS-IT1-201ENST00000434195 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
HLCS-IT1-201ENST00000434195 ABCC9O60706 1549 aa24.88■■□□□ 1.57
HLCS-IT1-201ENST00000434195 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
HLCS-IT1-201ENST00000434195 NACADO15069 1562 aa23.97■■□□□ 1.43
HLCS-IT1-201ENST00000434195 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
HLCS-IT1-201ENST00000434195 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
HLCS-IT1-201ENST00000434195 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
HLCS-IT1-201ENST00000434195 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
HLCS-IT1-201ENST00000434195 UNC13AQ9UPW8 1703 aa23.49■■□□□ 1.35
HLCS-IT1-201ENST00000434195 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
HLCS-IT1-201ENST00000434195 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
HLCS-IT1-201ENST00000434195 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLCS-IT1-201ENST00000434195 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
HLCS-IT1-201ENST00000434195 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
HLCS-IT1-201ENST00000434195 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
HLCS-IT1-201ENST00000434195 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
HLCS-IT1-201ENST00000434195 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
HLCS-IT1-201ENST00000434195 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
HLCS-IT1-201ENST00000434195 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
HLCS-IT1-201ENST00000434195 MROH2BQ7Z745 1585 aa22.23■■□□□ 1.15
HLCS-IT1-201ENST00000434195 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
HLCS-IT1-201ENST00000434195 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
HLCS-IT1-201ENST00000434195 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
HLCS-IT1-201ENST00000434195 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
HLCS-IT1-201ENST00000434195 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
HLCS-IT1-201ENST00000434195 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
HLCS-IT1-201ENST00000434195 WIZO95785 1651 aa21.98■■□□□ 1.11
HLCS-IT1-201ENST00000434195 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
HLCS-IT1-201ENST00000434195 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
HLCS-IT1-201ENST00000434195 NESP48681 1621 aa21.61■■□□□ 1.05
HLCS-IT1-201ENST00000434195 LAMC3Q9Y6N6 1575 aa21.5■■□□□ 1.03
HLCS-IT1-201ENST00000434195 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
HLCS-IT1-201ENST00000434195 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
HLCS-IT1-201ENST00000434195 CFTRP13569 1480 aa21.41■■□□□ 1.02
HLCS-IT1-201ENST00000434195 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
HLCS-IT1-201ENST00000434195 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
HLCS-IT1-201ENST00000434195 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1
HLCS-IT1-201ENST00000434195 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
HLCS-IT1-201ENST00000434195 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
HLCS-IT1-201ENST00000434195 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
HLCS-IT1-201ENST00000434195 PRDM2Q13029 1718 aa21.22■□□□□ 0.99
HLCS-IT1-201ENST00000434195 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
HLCS-IT1-201ENST00000434195 CUX2O14529 1486 aa21.14■□□□□ 0.98
HLCS-IT1-201ENST00000434195 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.98
HLCS-IT1-201ENST00000434195 WDR62O43379 1518 aa21.1■□□□□ 0.97
HLCS-IT1-201ENST00000434195 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
HLCS-IT1-201ENST00000434195 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
HLCS-IT1-201ENST00000434195 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
HLCS-IT1-201ENST00000434195 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
HLCS-IT1-201ENST00000434195 CUX1P39880 1505 aa20.85■□□□□ 0.93
HLCS-IT1-201ENST00000434195 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
HLCS-IT1-201ENST00000434195 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
HLCS-IT1-201ENST00000434195 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
HLCS-IT1-201ENST00000434195 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
HLCS-IT1-201ENST00000434195 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
HLCS-IT1-201ENST00000434195 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
HLCS-IT1-201ENST00000434195 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
HLCS-IT1-201ENST00000434195 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
HLCS-IT1-201ENST00000434195 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
HLCS-IT1-201ENST00000434195 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
HLCS-IT1-201ENST00000434195 SOGA1O94964 1423 aa20.63■□□□□ 0.89
HLCS-IT1-201ENST00000434195 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
HLCS-IT1-201ENST00000434195 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
HLCS-IT1-201ENST00000434195 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.88
HLCS-IT1-201ENST00000434195 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
HLCS-IT1-201ENST00000434195 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
HLCS-IT1-201ENST00000434195 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
HLCS-IT1-201ENST00000434195 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
HLCS-IT1-201ENST00000434195 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
HLCS-IT1-201ENST00000434195 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
HLCS-IT1-201ENST00000434195 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
HLCS-IT1-201ENST00000434195 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
HLCS-IT1-201ENST00000434195 MAGI1Q96QZ7 1491 aaPredicted RBP20.32■□□□□ 0.84
HLCS-IT1-201ENST00000434195 CHD1O14646 1710 aa20.3■□□□□ 0.84
HLCS-IT1-201ENST00000434195 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.83
HLCS-IT1-201ENST00000434195 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
HLCS-IT1-201ENST00000434195 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
HLCS-IT1-201ENST00000434195 OSCARQ8IYS5 282 aa20.22■□□□□ 0.83
HLCS-IT1-201ENST00000434195 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
HLCS-IT1-201ENST00000434195 IGF1RP08069 1367 aa20.2■□□□□ 0.82
HLCS-IT1-201ENST00000434195 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
HLCS-IT1-201ENST00000434195 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
HLCS-IT1-201ENST00000434195 FBLN2P98095 1184 aa20.17■□□□□ 0.82
HLCS-IT1-201ENST00000434195 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
HLCS-IT1-201ENST00000434195 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
HLCS-IT1-201ENST00000434195 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
HLCS-IT1-201ENST00000434195 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
HLCS-IT1-201ENST00000434195 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
HLCS-IT1-201ENST00000434195 NUP160Q12769 1436 aa20.09■□□□□ 0.81
HLCS-IT1-201ENST00000434195 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
HLCS-IT1-201ENST00000434195 CUL7Q14999 1698 aa20.07■□□□□ 0.8
HLCS-IT1-201ENST00000434195 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
HLCS-IT1-201ENST00000434195 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
HLCS-IT1-201ENST00000434195 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
HLCS-IT1-201ENST00000434195 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
HLCS-IT1-201ENST00000434195 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
HLCS-IT1-201ENST00000434195 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
HLCS-IT1-201ENST00000434195 SHROOM2Q13796 1616 aa19.93■□□□□ 0.78
HLCS-IT1-201ENST00000434195 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms