RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
RPUSD3-208ENST00000433972 CCDC180Q9P1Z9 1646 aa33.2■■■□□ 2.91
RPUSD3-208ENST00000433972 ABCC9O60706 1549 aa33.1■■■□□ 2.89
RPUSD3-208ENST00000433972 RB1CC1Q8TDY2 1594 aa31.62■■■□□ 2.65
RPUSD3-208ENST00000433972 NACADO15069 1562 aa31.43■■■□□ 2.62
RPUSD3-208ENST00000433972 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
RPUSD3-208ENST00000433972 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
RPUSD3-208ENST00000433972 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
RPUSD3-208ENST00000433972 PABPN1Q86U42 306 aaKnown RBP eCLIP30.81■■■□□ 2.52
RPUSD3-208ENST00000433972 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
RPUSD3-208ENST00000433972 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
RPUSD3-208ENST00000433972 DCAF1Q9Y4B6 1507 aa30.66■■■□□ 2.5
RPUSD3-208ENST00000433972 BICRAQ9NZM4 1560 aa30.57■■■□□ 2.48
RPUSD3-208ENST00000433972 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
RPUSD3-208ENST00000433972 SCRIBQ14160 1630 aa30.19■■■□□ 2.42
RPUSD3-208ENST00000433972 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.38
RPUSD3-208ENST00000433972 EIF4G1Q04637 1599 aaKnown RBP29.88■■■□□ 2.37
RPUSD3-208ENST00000433972 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
RPUSD3-208ENST00000433972 NCAPD3P42695 1498 aa29■■■□□ 2.23
RPUSD3-208ENST00000433972 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
RPUSD3-208ENST00000433972 SMARCA2P51531 1590 aa28.87■■■□□ 2.21
RPUSD3-208ENST00000433972 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
RPUSD3-208ENST00000433972 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
RPUSD3-208ENST00000433972 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
RPUSD3-208ENST00000433972 ERCC6Q03468 1493 aa28.67■■■□□ 2.18
RPUSD3-208ENST00000433972 BAZ1BQ9UIG0 1483 aaKnown RBP28.65■■■□□ 2.18
RPUSD3-208ENST00000433972 CUX2O14529 1486 aa28.62■■■□□ 2.17
RPUSD3-208ENST00000433972 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
RPUSD3-208ENST00000433972 DNAJC5Q9H3Z4 198 aa28.47■■■□□ 2.15
RPUSD3-208ENST00000433972 MROH2BQ7Z745 1585 aa28.46■■■□□ 2.15
RPUSD3-208ENST00000433972 NESP48681 1621 aa28.4■■■□□ 2.14
RPUSD3-208ENST00000433972 LAMC3Q9Y6N6 1575 aa28.34■■■□□ 2.13
RPUSD3-208ENST00000433972 PDS5BQ9NTI5 1447 aa28.24■■■□□ 2.11
RPUSD3-208ENST00000433972 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
RPUSD3-208ENST00000433972 CADPSQ9ULU8 1353 aa28.13■■■□□ 2.09
RPUSD3-208ENST00000433972 WIZO95785 1651 aa28.1■■■□□ 2.09
RPUSD3-208ENST00000433972 KIF21AQ7Z4S6 1674 aa28.01■■■□□ 2.07
RPUSD3-208ENST00000433972 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
RPUSD3-208ENST00000433972 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
RPUSD3-208ENST00000433972 TOP2AP11388 1531 aaKnown RBP27.85■■■□□ 2.05
RPUSD3-208ENST00000433972 CEP164Q9UPV0 1460 aa27.84■■■□□ 2.05
RPUSD3-208ENST00000433972 WDR62O43379 1518 aa27.83■■■□□ 2.05
RPUSD3-208ENST00000433972 CFTRP13569 1480 aa27.81■■■□□ 2.04
RPUSD3-208ENST00000433972 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
RPUSD3-208ENST00000433972 CCDC88BA6NC98 1476 aa27.5■■□□□ 1.99
RPUSD3-208ENST00000433972 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
RPUSD3-208ENST00000433972 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
RPUSD3-208ENST00000433972 OSCARQ8IYS5 282 aa27.32■■□□□ 1.96
RPUSD3-208ENST00000433972 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
RPUSD3-208ENST00000433972 IFT140Q96RY7 1462 aa27.29■■□□□ 1.96
RPUSD3-208ENST00000433972 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
RPUSD3-208ENST00000433972 TRIM41Q8WV44 630 aa27.23■■□□□ 1.95
RPUSD3-208ENST00000433972 DNMBPQ6XZF7 1577 aa27.17■■□□□ 1.94
RPUSD3-208ENST00000433972 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
RPUSD3-208ENST00000433972 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.92
RPUSD3-208ENST00000433972 POLA1P09884 1462 aaPredicted RBP26.97■■□□□ 1.91
RPUSD3-208ENST00000433972 TARBP1Q13395 1621 aaKnown RBP26.95■■□□□ 1.91
RPUSD3-208ENST00000433972 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.93e-6■■□□□ 13.8
RPUSD3-208ENST00000433972 SOGA1O94964 1423 aa26.89■■□□□ 1.89
RPUSD3-208ENST00000433972 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
RPUSD3-208ENST00000433972 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.89
RPUSD3-208ENST00000433972 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.89
RPUSD3-208ENST00000433972 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.89
RPUSD3-208ENST00000433972 RAD54L2Q9Y4B4 1467 aa26.82■■□□□ 1.88
RPUSD3-208ENST00000433972 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
RPUSD3-208ENST00000433972 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
RPUSD3-208ENST00000433972 FBLN2P98095 1184 aa26.79■■□□□ 1.88
RPUSD3-208ENST00000433972 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
RPUSD3-208ENST00000433972 CUX1P39880 1505 aa26.75■■□□□ 1.87
RPUSD3-208ENST00000433972 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
RPUSD3-208ENST00000433972 CHD1O14646 1710 aa26.73■■□□□ 1.87
RPUSD3-208ENST00000433972 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
RPUSD3-208ENST00000433972 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
RPUSD3-208ENST00000433972 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
RPUSD3-208ENST00000433972 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.86
RPUSD3-208ENST00000433972 CYB5RLQ6IPT4 315 aa26.62■■□□□ 1.85
RPUSD3-208ENST00000433972 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
RPUSD3-208ENST00000433972 SYNJ2O15056 1496 aa26.56■■□□□ 1.84
RPUSD3-208ENST00000433972 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
RPUSD3-208ENST00000433972 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
RPUSD3-208ENST00000433972 ARAP1Q96P48 1450 aa26.53■■□□□ 1.84
RPUSD3-208ENST00000433972 CLASP1Q7Z460 1538 aa26.5■■□□□ 1.83
RPUSD3-208ENST00000433972 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
RPUSD3-208ENST00000433972 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
RPUSD3-208ENST00000433972 ABCA5Q8WWZ7 1642 aa26.44■■□□□ 1.82
RPUSD3-208ENST00000433972 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
RPUSD3-208ENST00000433972 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
RPUSD3-208ENST00000433972 TRHP20396 242 aaPredicted RBP26.34■■□□□ 1.81
RPUSD3-208ENST00000433972 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
RPUSD3-208ENST00000433972 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
RPUSD3-208ENST00000433972 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
RPUSD3-208ENST00000433972 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
RPUSD3-208ENST00000433972 NUP160Q12769 1436 aa26.21■■□□□ 1.79
RPUSD3-208ENST00000433972 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
RPUSD3-208ENST00000433972 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
RPUSD3-208ENST00000433972 ERCC6L2Q5T890 1561 aa26■■□□□ 1.75
RPUSD3-208ENST00000433972 JPH4Q96JJ6 628 aa25.95■■□□□ 1.74
RPUSD3-208ENST00000433972 KIF27Q86VH2 1401 aa25.95■■□□□ 1.74
RPUSD3-208ENST00000433972 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
RPUSD3-208ENST00000433972 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms