RNA–Protein interactions for RNA: ENST00000433730.1

KHDC1-203, Transcript of KH domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene KHDC1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-203ENST00000433730 NISCHQ9Y2I1 1504 aa51.61■■■■■ 5.85
KHDC1-203ENST00000433730 CCDC180Q9P1Z9 1646 aa46.25■■■■■ 4.99
KHDC1-203ENST00000433730 ABCC9O60706 1549 aa45.62■■■■■ 4.89
KHDC1-203ENST00000433730 RB1CC1Q8TDY2 1594 aa43.74■■■■■ 4.59
KHDC1-203ENST00000433730 NACADO15069 1562 aa43.54■■■■■ 4.56
KHDC1-203ENST00000433730 DCAF8L2P0C7V8 631 aa43.27■■■■■ 4.52
KHDC1-203ENST00000433730 MYO15BQ96JP2 1530 aa43.09■■■■■ 4.49
KHDC1-203ENST00000433730 ZCCHC6Q5VYS8 1495 aaKnown RBP42.9■■■■■ 4.46
KHDC1-203ENST00000433730 UNC13AQ9UPW8 1703 aa42.8■■■■■ 4.44
KHDC1-203ENST00000433730 DCAF1Q9Y4B6 1507 aa42.71■■■■■ 4.43
KHDC1-203ENST00000433730 PABPN1Q86U42 306 aaKnown RBP eCLIP42.46■■■■■ 4.39
KHDC1-203ENST00000433730 BICRAQ9NZM4 1560 aa42.36■■■■■ 4.37
KHDC1-203ENST00000433730 DNAJC5BQ9UF47 199 aa42.21■■■■■ 4.35
KHDC1-203ENST00000433730 SCRIBQ14160 1630 aa42.09■■■■■ 4.33
KHDC1-203ENST00000433730 SHROOM4Q9ULL8 1493 aa41.96■■■■■ 4.31
KHDC1-203ENST00000433730 EIF4G1Q04637 1599 aaKnown RBP41.33■■■■■ 4.21
KHDC1-203ENST00000433730 CC2D2AQ9P2K1 1620 aa41.29■■■■■ 4.2
KHDC1-203ENST00000433730 CECR2Q9BXF3 1484 aa41.07■■■■■ 4.16
KHDC1-203ENST00000433730 SMARCA4P51532 1647 aa40.22■■■■■ 4.03
KHDC1-203ENST00000433730 NCAPD3P42695 1498 aa40.11■■■■■ 4.01
KHDC1-203ENST00000433730 BAZ1AQ9NRL2 1556 aaPredicted RBP40.1■■■■■ 4.01
KHDC1-203ENST00000433730 SMARCA2P51531 1590 aa40.06■■■■■ 4
KHDC1-203ENST00000433730 ATAD2BQ9ULI0 1458 aa40.06■■■■■ 4
KHDC1-203ENST00000433730 HMGXB3Q12766 1538 aa39.95■■■■□ 3.99
KHDC1-203ENST00000433730 PEG3Q9GZU2 1588 aa39.82■■■■□ 3.97
KHDC1-203ENST00000433730 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
KHDC1-203ENST00000433730 MROH2BQ7Z745 1585 aa39.74■■■■□ 3.95
KHDC1-203ENST00000433730 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
KHDC1-203ENST00000433730 WIZO95785 1651 aa39.35■■■■□ 3.89
KHDC1-203ENST00000433730 NESP48681 1621 aa39.3■■■■□ 3.88
KHDC1-203ENST00000433730 LAMC3Q9Y6N6 1575 aa39.23■■■■□ 3.87
KHDC1-203ENST00000433730 CUX2O14529 1486 aa39.2■■■■□ 3.87
KHDC1-203ENST00000433730 RSF1Q96T23 1441 aaPredicted RBP39.07■■■■□ 3.85
KHDC1-203ENST00000433730 KIF21AQ7Z4S6 1674 aa38.95■■■■□ 3.83
KHDC1-203ENST00000433730 PDS5BQ9NTI5 1447 aa38.93■■■■□ 3.82
KHDC1-203ENST00000433730 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
KHDC1-203ENST00000433730 TOP2AP11388 1531 aaKnown RBP38.9■■■■□ 3.82
KHDC1-203ENST00000433730 CADPSQ9ULU8 1353 aa38.9■■■■□ 3.82
KHDC1-203ENST00000433730 CFTRP13569 1480 aa38.58■■■■□ 3.77
KHDC1-203ENST00000433730 MRC2Q9UBG0 1479 aa38.58■■■■□ 3.77
KHDC1-203ENST00000433730 CEP164Q9UPV0 1460 aa38.54■■■■□ 3.76
KHDC1-203ENST00000433730 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
KHDC1-203ENST00000433730 DNAJC5Q9H3Z4 198 aa38.49■■■■□ 3.75
KHDC1-203ENST00000433730 WDR62O43379 1518 aa38.48■■■■□ 3.75
KHDC1-203ENST00000433730 PRDM2Q13029 1718 aa38.46■■■■□ 3.75
KHDC1-203ENST00000433730 CCDC88BA6NC98 1476 aa38.37■■■■□ 3.73
KHDC1-203ENST00000433730 URB2Q14146 1524 aaKnown RBP38.12■■■■□ 3.69
KHDC1-203ENST00000433730 TOPBP1Q92547 1522 aa37.82■■■■□ 3.65
KHDC1-203ENST00000433730 ABCC8Q09428 1581 aa37.82■■■■□ 3.65
KHDC1-203ENST00000433730 DNMBPQ6XZF7 1577 aa37.78■■■■□ 3.64
KHDC1-203ENST00000433730 IFT140Q96RY7 1462 aa37.73■■■■□ 3.63
KHDC1-203ENST00000433730 SUPT5HO00267 1087 aaKnown RBP37.66■■■■□ 3.62
KHDC1-203ENST00000433730 ZNF608Q9ULD9 1512 aaPredicted RBP37.56■■■■□ 3.6
KHDC1-203ENST00000433730 EIF4G3O43432 1585 aaKnown RBP37.49■■■■□ 3.59
KHDC1-203ENST00000433730 TARBP1Q13395 1621 aaKnown RBP37.48■■■■□ 3.59
KHDC1-203ENST00000433730 POLA1P09884 1462 aaPredicted RBP37.46■■■■□ 3.59
KHDC1-203ENST00000433730 OSCARQ8IYS5 282 aa37.39■■■■□ 3.58
KHDC1-203ENST00000433730 CUX1P39880 1505 aa37.33■■■■□ 3.57
KHDC1-203ENST00000433730 FGD5Q6ZNL6 1462 aa37.31■■■■□ 3.56
KHDC1-203ENST00000433730 SOGA1O94964 1423 aa37.27■■■■□ 3.56
KHDC1-203ENST00000433730 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.56
KHDC1-203ENST00000433730 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.56
KHDC1-203ENST00000433730 WDR97A6NE52 1622 aa37.23■■■■□ 3.55
KHDC1-203ENST00000433730 CHD1O14646 1710 aa37.16■■■■□ 3.54
KHDC1-203ENST00000433730 TDRD9Q8NDG6 1382 aaKnown RBP37.1■■■■□ 3.53
KHDC1-203ENST00000433730 TRIM41Q8WV44 630 aa37.03■■■■□ 3.52
KHDC1-203ENST00000433730 SNAPC4Q5SXM2 1469 aa36.96■■■■□ 3.51
KHDC1-203ENST00000433730 BIVM-ERCC5R4GMW8 1640 aa36.96■■■■□ 3.51
KHDC1-203ENST00000433730 RIMBP3CA6NJZ7 1639 aa36.95■■■■□ 3.51
KHDC1-203ENST00000433730 RIMBP3BA6NNM3 1639 aa36.95■■■■□ 3.51
KHDC1-203ENST00000433730 RIMBP3Q9UFD9 1639 aa36.95■■■■□ 3.51
KHDC1-203ENST00000433730 GRIN2BQ13224 1484 aa36.94■■■■□ 3.5
KHDC1-203ENST00000433730 PBRM1Q86U86 1689 aa36.94■■■■□ 3.5
KHDC1-203ENST00000433730 TOP2BQ02880 1626 aa36.93■■■■□ 3.5
KHDC1-203ENST00000433730 FBLN2P98095 1184 aa36.93■■■■□ 3.5
KHDC1-203ENST00000433730 MAGI1Q96QZ7 1491 aaPredicted RBP36.93■■■■□ 3.5
KHDC1-203ENST00000433730 ABCA10Q8WWZ4 1543 aa36.92■■■■□ 3.5
KHDC1-203ENST00000433730 WRNQ14191 1432 aaPredicted RBP eCLIP36.91■■■■□ 3.5
KHDC1-203ENST00000433730 ABCA5Q8WWZ7 1642 aa36.87■■■■□ 3.49
KHDC1-203ENST00000433730 GAPVD1Q14C86 1478 aa36.87■■■■□ 3.49
KHDC1-203ENST00000433730 SYNJ1O43426 1573 aa36.87■■■■□ 3.49
KHDC1-203ENST00000433730 ARHGEF11O15085 1522 aa36.85■■■■□ 3.49
KHDC1-203ENST00000433730 SYNJ2O15056 1496 aa36.77■■■■□ 3.48
KHDC1-203ENST00000433730 CHMP7Q8WUX9 453 aaPredicted RBP36.76■■■■□ 3.48
KHDC1-203ENST00000433730 CLASP1Q7Z460 1538 aa36.66■■■■□ 3.46
KHDC1-203ENST00000433730 ADAMTS12P58397 1594 aa36.56■■■■□ 3.44
KHDC1-203ENST00000433730 ARAP1Q96P48 1450 aa36.5■■■■□ 3.43
KHDC1-203ENST00000433730 ERICH3Q5RHP9 1530 aa36.5■■■■□ 3.43
KHDC1-203ENST00000433730 GRIN2AQ12879 1464 aa36.47■■■■□ 3.43
KHDC1-203ENST00000433730 CYB5RLQ6IPT4 315 aa36.46■■■■□ 3.43
KHDC1-203ENST00000433730 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
KHDC1-203ENST00000433730 CEP170Q5SW79 1584 aa36.32■■■■□ 3.41
KHDC1-203ENST00000433730 NUP160Q12769 1436 aa36.31■■■■□ 3.4
KHDC1-203ENST00000433730 KIF27Q86VH2 1401 aa36.18■■■■□ 3.38
KHDC1-203ENST00000433730 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
KHDC1-203ENST00000433730 CUL7Q14999 1698 aa36.13■■■■□ 3.37
KHDC1-203ENST00000433730 ERCC6L2Q5T890 1561 aa36.07■■■■□ 3.37
KHDC1-203ENST00000433730 RUSC2Q8N2Y8 1516 aa36.03■■■■□ 3.36
KHDC1-203ENST00000433730 IGF1RP08069 1367 aa36.02■■■■□ 3.36
KHDC1-203ENST00000433730 TRHP20396 242 aaPredicted RBP35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms