RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-205ENST00000433369 NISCHQ9Y2I1 1504 aa31.26■■■□□ 2.59
PTPN12-205ENST00000433369 CCDC180Q9P1Z9 1646 aa27.87■■■□□ 2.05
PTPN12-205ENST00000433369 ABCC9O60706 1549 aa27.55■■■□□ 2
PTPN12-205ENST00000433369 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
PTPN12-205ENST00000433369 NACADO15069 1562 aa26.24■■□□□ 1.79
PTPN12-205ENST00000433369 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
PTPN12-205ENST00000433369 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
PTPN12-205ENST00000433369 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
PTPN12-205ENST00000433369 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
PTPN12-205ENST00000433369 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
PTPN12-205ENST00000433369 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
PTPN12-205ENST00000433369 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
PTPN12-205ENST00000433369 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
PTPN12-205ENST00000433369 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
PTPN12-205ENST00000433369 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
PTPN12-205ENST00000433369 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
PTPN12-205ENST00000433369 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
PTPN12-205ENST00000433369 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
PTPN12-205ENST00000433369 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
PTPN12-205ENST00000433369 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
PTPN12-205ENST00000433369 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
PTPN12-205ENST00000433369 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.47
PTPN12-205ENST00000433369 SMARCA2P51531 1590 aa24.14■■□□□ 1.45
PTPN12-205ENST00000433369 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.45
PTPN12-205ENST00000433369 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
PTPN12-205ENST00000433369 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
PTPN12-205ENST00000433369 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
PTPN12-205ENST00000433369 WIZO95785 1651 aa23.89■■□□□ 1.41
PTPN12-205ENST00000433369 NESP48681 1621 aa23.81■■□□□ 1.4
PTPN12-205ENST00000433369 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
PTPN12-205ENST00000433369 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
PTPN12-205ENST00000433369 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
PTPN12-205ENST00000433369 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
PTPN12-205ENST00000433369 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
PTPN12-205ENST00000433369 CADPSQ9ULU8 1353 aa23.51■■□□□ 1.35
PTPN12-205ENST00000433369 CUX2O14529 1486 aa23.5■■□□□ 1.35
PTPN12-205ENST00000433369 THOC2Q8NI27 1593 aaKnown RBP23.47■■□□□ 1.35
PTPN12-205ENST00000433369 PDS5BQ9NTI5 1447 aa23.43■■□□□ 1.34
PTPN12-205ENST00000433369 CFTRP13569 1480 aa23.33■■□□□ 1.33
PTPN12-205ENST00000433369 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
PTPN12-205ENST00000433369 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
PTPN12-205ENST00000433369 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
PTPN12-205ENST00000433369 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
PTPN12-205ENST00000433369 WDR62O43379 1518 aa23.19■■□□□ 1.3
PTPN12-205ENST00000433369 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
PTPN12-205ENST00000433369 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
PTPN12-205ENST00000433369 URB2Q14146 1524 aaKnown RBP23.08■■□□□ 1.28
PTPN12-205ENST00000433369 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
PTPN12-205ENST00000433369 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
PTPN12-205ENST00000433369 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
PTPN12-205ENST00000433369 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
PTPN12-205ENST00000433369 ZNF608Q9ULD9 1512 aaPredicted RBP22.75■■□□□ 1.23
PTPN12-205ENST00000433369 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
PTPN12-205ENST00000433369 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
PTPN12-205ENST00000433369 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
PTPN12-205ENST00000433369 CUX1P39880 1505 aa22.65■■□□□ 1.22
PTPN12-205ENST00000433369 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
PTPN12-205ENST00000433369 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
PTPN12-205ENST00000433369 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.2
PTPN12-205ENST00000433369 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.22e-7■■■□□ 17.6
PTPN12-205ENST00000433369 SOGA1O94964 1423 aa22.55■■□□□ 1.2
PTPN12-205ENST00000433369 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
PTPN12-205ENST00000433369 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
PTPN12-205ENST00000433369 WDR97A6NE52 1622 aa22.44■■□□□ 1.18
PTPN12-205ENST00000433369 CHD1O14646 1710 aa22.41■■□□□ 1.18
PTPN12-205ENST00000433369 SYNJ1O43426 1573 aa22.39■■□□□ 1.18
PTPN12-205ENST00000433369 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
PTPN12-205ENST00000433369 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
PTPN12-205ENST00000433369 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
PTPN12-205ENST00000433369 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
PTPN12-205ENST00000433369 ABCA10Q8WWZ4 1543 aa22.33■■□□□ 1.17
PTPN12-205ENST00000433369 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
PTPN12-205ENST00000433369 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
PTPN12-205ENST00000433369 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
PTPN12-205ENST00000433369 FBLN2P98095 1184 aa22.29■■□□□ 1.16
PTPN12-205ENST00000433369 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
PTPN12-205ENST00000433369 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
PTPN12-205ENST00000433369 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
PTPN12-205ENST00000433369 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
PTPN12-205ENST00000433369 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
PTPN12-205ENST00000433369 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
PTPN12-205ENST00000433369 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
PTPN12-205ENST00000433369 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
PTPN12-205ENST00000433369 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
PTPN12-205ENST00000433369 CLASP1Q7Z460 1538 aa22.12■■□□□ 1.13
PTPN12-205ENST00000433369 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
PTPN12-205ENST00000433369 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
PTPN12-205ENST00000433369 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
PTPN12-205ENST00000433369 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
PTPN12-205ENST00000433369 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
PTPN12-205ENST00000433369 CYB5RLQ6IPT4 315 aa21.98■■□□□ 1.11
PTPN12-205ENST00000433369 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
PTPN12-205ENST00000433369 NUP160Q12769 1436 aa21.94■■□□□ 1.1
PTPN12-205ENST00000433369 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
PTPN12-205ENST00000433369 KIF27Q86VH2 1401 aa21.88■■□□□ 1.09
PTPN12-205ENST00000433369 IGF1RP08069 1367 aa21.87■■□□□ 1.09
PTPN12-205ENST00000433369 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
PTPN12-205ENST00000433369 CUL7Q14999 1698 aa21.8■■□□□ 1.08
PTPN12-205ENST00000433369 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.08
PTPN12-205ENST00000433369 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms