RNA–Protein interactions for RNA: ENST00000433182.1

E2F3-IT1-201, E2F3 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene E2F3-IT1, Length 400 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-IT1-201ENST00000433182 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
E2F3-IT1-201ENST00000433182 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
E2F3-IT1-201ENST00000433182 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
E2F3-IT1-201ENST00000433182 ABCC9O60706 1549 aa14.82□□□□□ -0.04
E2F3-IT1-201ENST00000433182 CCDC180Q9P1Z9 1646 aa14.65□□□□□ -0.06
E2F3-IT1-201ENST00000433182 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
E2F3-IT1-201ENST00000433182 DCAF8L2P0C7V8 631 aa14.01□□□□□ -0.17
E2F3-IT1-201ENST00000433182 NACADO15069 1562 aa13.92□□□□□ -0.18
E2F3-IT1-201ENST00000433182 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
E2F3-IT1-201ENST00000433182 SENP3Q9H4L4 574 aaPredicted RBP13.83□□□□□ -0.2
E2F3-IT1-201ENST00000433182 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
E2F3-IT1-201ENST00000433182 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
E2F3-IT1-201ENST00000433182 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
E2F3-IT1-201ENST00000433182 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
E2F3-IT1-201ENST00000433182 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
E2F3-IT1-201ENST00000433182 ZCCHC6Q5VYS8 1495 aaKnown RBP13.46□□□□□ -0.25
E2F3-IT1-201ENST00000433182 SHROOM4Q9ULL8 1493 aa13.44□□□□□ -0.26
E2F3-IT1-201ENST00000433182 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
E2F3-IT1-201ENST00000433182 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
E2F3-IT1-201ENST00000433182 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
E2F3-IT1-201ENST00000433182 CC2D2AQ9P2K1 1620 aa13.33□□□□□ -0.28
E2F3-IT1-201ENST00000433182 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
E2F3-IT1-201ENST00000433182 FOXD1Q16676 465 aa13.01□□□□□ -0.33
E2F3-IT1-201ENST00000433182 DNAJC5Q9H3Z4 198 aa12.93□□□□□ -0.34
E2F3-IT1-201ENST00000433182 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
E2F3-IT1-201ENST00000433182 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
E2F3-IT1-201ENST00000433182 CUX2O14529 1486 aa12.82□□□□□ -0.36
E2F3-IT1-201ENST00000433182 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
E2F3-IT1-201ENST00000433182 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
E2F3-IT1-201ENST00000433182 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
E2F3-IT1-201ENST00000433182 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
E2F3-IT1-201ENST00000433182 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
E2F3-IT1-201ENST00000433182 BAZ1AQ9NRL2 1556 aaPredicted RBP12.7□□□□□ -0.38
E2F3-IT1-201ENST00000433182 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
E2F3-IT1-201ENST00000433182 NESP48681 1621 aa12.65□□□□□ -0.38
E2F3-IT1-201ENST00000433182 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
E2F3-IT1-201ENST00000433182 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
E2F3-IT1-201ENST00000433182 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
E2F3-IT1-201ENST00000433182 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
E2F3-IT1-201ENST00000433182 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
E2F3-IT1-201ENST00000433182 CADPSQ9ULU8 1353 aa12.48□□□□□ -0.41
E2F3-IT1-201ENST00000433182 KIF21AQ7Z4S6 1674 aa12.47□□□□□ -0.41
E2F3-IT1-201ENST00000433182 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
E2F3-IT1-201ENST00000433182 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
E2F3-IT1-201ENST00000433182 WIZO95785 1651 aa12.38□□□□□ -0.43
E2F3-IT1-201ENST00000433182 CEP164Q9UPV0 1460 aa12.38□□□□□ -0.43
E2F3-IT1-201ENST00000433182 WDR62O43379 1518 aa12.35□□□□□ -0.43
E2F3-IT1-201ENST00000433182 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
E2F3-IT1-201ENST00000433182 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
E2F3-IT1-201ENST00000433182 CFTRP13569 1480 aa12.27□□□□□ -0.44
E2F3-IT1-201ENST00000433182 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
E2F3-IT1-201ENST00000433182 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
E2F3-IT1-201ENST00000433182 MSH5O43196 834 aa12.23□□□□□ -0.45
E2F3-IT1-201ENST00000433182 URB2Q14146 1524 aaKnown RBP12.18□□□□□ -0.46
E2F3-IT1-201ENST00000433182 IFT140Q96RY7 1462 aa12.13□□□□□ -0.47
E2F3-IT1-201ENST00000433182 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
E2F3-IT1-201ENST00000433182 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
E2F3-IT1-201ENST00000433182 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
E2F3-IT1-201ENST00000433182 PIAS4Q8N2W9 510 aaPredicted RBP12.08□□□□□ -0.48
E2F3-IT1-201ENST00000433182 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
E2F3-IT1-201ENST00000433182 FBLN2P98095 1184 aa12.06□□□□□ -0.48
E2F3-IT1-201ENST00000433182 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
E2F3-IT1-201ENST00000433182 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
E2F3-IT1-201ENST00000433182 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
E2F3-IT1-201ENST00000433182 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
E2F3-IT1-201ENST00000433182 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
E2F3-IT1-201ENST00000433182 CYB5RLQ6IPT4 315 aa12.01□□□□□ -0.49
E2F3-IT1-201ENST00000433182 ARHGEF11O15085 1522 aa12□□□□□ -0.49
E2F3-IT1-201ENST00000433182 EIF4G3O43432 1585 aaKnown RBP12□□□□□ -0.49
E2F3-IT1-201ENST00000433182 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
E2F3-IT1-201ENST00000433182 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.49
E2F3-IT1-201ENST00000433182 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
E2F3-IT1-201ENST00000433182 POLA1P09884 1462 aaPredicted RBP11.93□□□□□ -0.5
E2F3-IT1-201ENST00000433182 SOGA1O94964 1423 aa11.93□□□□□ -0.5
E2F3-IT1-201ENST00000433182 TDRD9Q8NDG6 1382 aaKnown RBP11.92□□□□□ -0.5
E2F3-IT1-201ENST00000433182 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
E2F3-IT1-201ENST00000433182 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
E2F3-IT1-201ENST00000433182 CHD1O14646 1710 aa11.91□□□□□ -0.5
E2F3-IT1-201ENST00000433182 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
E2F3-IT1-201ENST00000433182 ADRA2BP18089 450 aa11.87□□□□□ -0.51
E2F3-IT1-201ENST00000433182 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
E2F3-IT1-201ENST00000433182 FGD5Q6ZNL6 1462 aa11.85□□□□□ -0.51
E2F3-IT1-201ENST00000433182 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
E2F3-IT1-201ENST00000433182 WDR97A6NE52 1622 aa11.85□□□□□ -0.51
E2F3-IT1-201ENST00000433182 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
E2F3-IT1-201ENST00000433182 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
E2F3-IT1-201ENST00000433182 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
E2F3-IT1-201ENST00000433182 SYNJ2O15056 1496 aa11.79□□□□□ -0.52
E2F3-IT1-201ENST00000433182 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
E2F3-IT1-201ENST00000433182 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
E2F3-IT1-201ENST00000433182 CUX1P39880 1505 aa11.79□□□□□ -0.52
E2F3-IT1-201ENST00000433182 GAPVD1Q14C86 1478 aa11.77□□□□□ -0.52
E2F3-IT1-201ENST00000433182 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
E2F3-IT1-201ENST00000433182 PBRM1Q86U86 1689 aa11.71□□□□□ -0.53
E2F3-IT1-201ENST00000433182 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
E2F3-IT1-201ENST00000433182 ABCA10Q8WWZ4 1543 aa11.7□□□□□ -0.54
E2F3-IT1-201ENST00000433182 GRIN2AQ12879 1464 aa11.65□□□□□ -0.54
E2F3-IT1-201ENST00000433182 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
E2F3-IT1-201ENST00000433182 FHAD1B1AJZ9 1412 aa11.62□□□□□ -0.55
E2F3-IT1-201ENST00000433182 ADAMTS12P58397 1594 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms