RNA–Protein interactions for RNA: ENST00000433066.1

SMPD4P1-202, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 3

Gene SMPD4P1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-202ENST00000433066 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
SMPD4P1-202ENST00000433066 ABCC9O60706 1549 aa17.58■□□□□ 0.41
SMPD4P1-202ENST00000433066 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
SMPD4P1-202ENST00000433066 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
SMPD4P1-202ENST00000433066 RB1CC1Q8TDY2 1594 aa16.52■□□□□ 0.24
SMPD4P1-202ENST00000433066 NACADO15069 1562 aa16.32■□□□□ 0.2
SMPD4P1-202ENST00000433066 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMPD4P1-202ENST00000433066 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
SMPD4P1-202ENST00000433066 UNC13AQ9UPW8 1703 aa16.13■□□□□ 0.17
SMPD4P1-202ENST00000433066 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
SMPD4P1-202ENST00000433066 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
SMPD4P1-202ENST00000433066 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
SMPD4P1-202ENST00000433066 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
SMPD4P1-202ENST00000433066 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
SMPD4P1-202ENST00000433066 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
SMPD4P1-202ENST00000433066 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
SMPD4P1-202ENST00000433066 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
SMPD4P1-202ENST00000433066 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
SMPD4P1-202ENST00000433066 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
SMPD4P1-202ENST00000433066 CUX2O14529 1486 aa15.36■□□□□ 0.05
SMPD4P1-202ENST00000433066 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
SMPD4P1-202ENST00000433066 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
SMPD4P1-202ENST00000433066 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
SMPD4P1-202ENST00000433066 NESP48681 1621 aa15□□□□□ -0.01
SMPD4P1-202ENST00000433066 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
SMPD4P1-202ENST00000433066 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
SMPD4P1-202ENST00000433066 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
SMPD4P1-202ENST00000433066 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
SMPD4P1-202ENST00000433066 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
SMPD4P1-202ENST00000433066 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
SMPD4P1-202ENST00000433066 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
SMPD4P1-202ENST00000433066 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
SMPD4P1-202ENST00000433066 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
SMPD4P1-202ENST00000433066 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
SMPD4P1-202ENST00000433066 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
SMPD4P1-202ENST00000433066 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
SMPD4P1-202ENST00000433066 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
SMPD4P1-202ENST00000433066 WDR62O43379 1518 aa14.64□□□□□ -0.07
SMPD4P1-202ENST00000433066 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
SMPD4P1-202ENST00000433066 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
SMPD4P1-202ENST00000433066 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
SMPD4P1-202ENST00000433066 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
SMPD4P1-202ENST00000433066 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
SMPD4P1-202ENST00000433066 RIMBP3CA6NJZ7 1639 aa14.42□□□□□ -0.1
SMPD4P1-202ENST00000433066 RIMBP3BA6NNM3 1639 aa14.42□□□□□ -0.1
SMPD4P1-202ENST00000433066 RIMBP3Q9UFD9 1639 aa14.42□□□□□ -0.1
SMPD4P1-202ENST00000433066 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
SMPD4P1-202ENST00000433066 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
SMPD4P1-202ENST00000433066 CFTRP13569 1480 aa14.37□□□□□ -0.11
SMPD4P1-202ENST00000433066 ARHGEF11O15085 1522 aa14.35□□□□□ -0.11
SMPD4P1-202ENST00000433066 WIZO95785 1651 aa14.34□□□□□ -0.11
SMPD4P1-202ENST00000433066 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
SMPD4P1-202ENST00000433066 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
SMPD4P1-202ENST00000433066 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.13
SMPD4P1-202ENST00000433066 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
SMPD4P1-202ENST00000433066 TOP2AP11388 1531 aaKnown RBP14.16□□□□□ -0.14
SMPD4P1-202ENST00000433066 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
SMPD4P1-202ENST00000433066 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
SMPD4P1-202ENST00000433066 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
SMPD4P1-202ENST00000433066 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
SMPD4P1-202ENST00000433066 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
SMPD4P1-202ENST00000433066 CHD1O14646 1710 aa14.07□□□□□ -0.16
SMPD4P1-202ENST00000433066 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMPD4P1-202ENST00000433066 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
SMPD4P1-202ENST00000433066 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
SMPD4P1-202ENST00000433066 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
SMPD4P1-202ENST00000433066 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
SMPD4P1-202ENST00000433066 CLASP1Q7Z460 1538 aa13.99□□□□□ -0.17
SMPD4P1-202ENST00000433066 FBLN2P98095 1184 aa13.96□□□□□ -0.17
SMPD4P1-202ENST00000433066 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
SMPD4P1-202ENST00000433066 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
SMPD4P1-202ENST00000433066 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
SMPD4P1-202ENST00000433066 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
SMPD4P1-202ENST00000433066 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
SMPD4P1-202ENST00000433066 SOGA1O94964 1423 aa13.85□□□□□ -0.19
SMPD4P1-202ENST00000433066 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
SMPD4P1-202ENST00000433066 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
SMPD4P1-202ENST00000433066 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
SMPD4P1-202ENST00000433066 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
SMPD4P1-202ENST00000433066 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
SMPD4P1-202ENST00000433066 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
SMPD4P1-202ENST00000433066 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
SMPD4P1-202ENST00000433066 CUX1P39880 1505 aa13.74□□□□□ -0.21
SMPD4P1-202ENST00000433066 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
SMPD4P1-202ENST00000433066 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
SMPD4P1-202ENST00000433066 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
SMPD4P1-202ENST00000433066 NUP160Q12769 1436 aa13.64□□□□□ -0.23
SMPD4P1-202ENST00000433066 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
SMPD4P1-202ENST00000433066 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
SMPD4P1-202ENST00000433066 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
SMPD4P1-202ENST00000433066 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
SMPD4P1-202ENST00000433066 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
SMPD4P1-202ENST00000433066 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
SMPD4P1-202ENST00000433066 KDM4FA0A1W2PPD8 638 aa13.57□□□□□ -0.24
SMPD4P1-202ENST00000433066 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
SMPD4P1-202ENST00000433066 ABCC10Q5T3U5 1492 aa13.54□□□□□ -0.24
SMPD4P1-202ENST00000433066 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
SMPD4P1-202ENST00000433066 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
SMPD4P1-202ENST00000433066 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
SMPD4P1-202ENST00000433066 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms