RNA–Protein interactions for RNA: ENST00000433041.1

BRD3-204, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-204ENST00000433041 NISCHQ9Y2I1 1504 aa39.66■■■■□ 3.94
BRD3-204ENST00000433041 CCDC180Q9P1Z9 1646 aa35.63■■■■□ 3.29
BRD3-204ENST00000433041 ABCC9O60706 1549 aa35.44■■■■□ 3.26
BRD3-204ENST00000433041 RB1CC1Q8TDY2 1594 aa33.78■■■■□ 3
BRD3-204ENST00000433041 NACADO15069 1562 aa33.56■■■□□ 2.96
BRD3-204ENST00000433041 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
BRD3-204ENST00000433041 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
BRD3-204ENST00000433041 MYO15BQ96JP2 1530 aa33.13■■■□□ 2.89
BRD3-204ENST00000433041 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
BRD3-204ENST00000433041 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
BRD3-204ENST00000433041 PABPN1Q86U42 306 aaKnown RBP eCLIP32.92■■■□□ 2.86
BRD3-204ENST00000433041 BICRAQ9NZM4 1560 aa32.89■■■□□ 2.86
BRD3-204ENST00000433041 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
BRD3-204ENST00000433041 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
BRD3-204ENST00000433041 SHROOM4Q9ULL8 1493 aa32.36■■■□□ 2.77
BRD3-204ENST00000433041 CC2D2AQ9P2K1 1620 aa32.07■■■□□ 2.72
BRD3-204ENST00000433041 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
BRD3-204ENST00000433041 CECR2Q9BXF3 1484 aa31.89■■■□□ 2.7
BRD3-204ENST00000433041 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
BRD3-204ENST00000433041 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
BRD3-204ENST00000433041 ATAD2BQ9ULI0 1458 aa30.9■■■□□ 2.54
BRD3-204ENST00000433041 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
BRD3-204ENST00000433041 HMGXB3Q12766 1538 aa30.82■■■□□ 2.52
BRD3-204ENST00000433041 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
BRD3-204ENST00000433041 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
BRD3-204ENST00000433041 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
BRD3-204ENST00000433041 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
BRD3-204ENST00000433041 ERCC6Q03468 1493 aa30.53■■■□□ 2.48
BRD3-204ENST00000433041 NESP48681 1621 aa30.51■■■□□ 2.48
BRD3-204ENST00000433041 CUX2O14529 1486 aa30.48■■■□□ 2.47
BRD3-204ENST00000433041 LAMC3Q9Y6N6 1575 aa30.29■■■□□ 2.44
BRD3-204ENST00000433041 WIZO95785 1651 aa30.27■■■□□ 2.44
BRD3-204ENST00000433041 THOC2Q8NI27 1593 aaKnown RBP30.26■■■□□ 2.43
BRD3-204ENST00000433041 DNAJC5Q9H3Z4 198 aa30.24■■■□□ 2.43
BRD3-204ENST00000433041 KIF21AQ7Z4S6 1674 aa30.2■■■□□ 2.42
BRD3-204ENST00000433041 PDS5BQ9NTI5 1447 aa30.01■■■□□ 2.39
BRD3-204ENST00000433041 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
BRD3-204ENST00000433041 RSF1Q96T23 1441 aaPredicted RBP29.94■■■□□ 2.38
BRD3-204ENST00000433041 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
BRD3-204ENST00000433041 MRC2Q9UBG0 1479 aa29.83■■■□□ 2.37
BRD3-204ENST00000433041 WDR62O43379 1518 aa29.81■■■□□ 2.36
BRD3-204ENST00000433041 CEP164Q9UPV0 1460 aa29.73■■■□□ 2.35
BRD3-204ENST00000433041 CFTRP13569 1480 aa29.72■■■□□ 2.35
BRD3-204ENST00000433041 FANCD2Q9BXW9 1451 aa29.7■■■□□ 2.35
BRD3-204ENST00000433041 PRDM2Q13029 1718 aa29.58■■■□□ 2.33
BRD3-204ENST00000433041 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
BRD3-204ENST00000433041 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
BRD3-204ENST00000433041 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
BRD3-204ENST00000433041 ZNF608Q9ULD9 1512 aaPredicted RBP29.11■■■□□ 2.25
BRD3-204ENST00000433041 IFT140Q96RY7 1462 aa29.1■■■□□ 2.25
BRD3-204ENST00000433041 DNMBPQ6XZF7 1577 aa29.1■■■□□ 2.25
BRD3-204ENST00000433041 EIF4G3O43432 1585 aaKnown RBP29.02■■■□□ 2.24
BRD3-204ENST00000433041 ABCC8Q09428 1581 aa29.01■■■□□ 2.24
BRD3-204ENST00000433041 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
BRD3-204ENST00000433041 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
BRD3-204ENST00000433041 OSCARQ8IYS5 282 aa28.95■■■□□ 2.22
BRD3-204ENST00000433041 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
BRD3-204ENST00000433041 CHD1O14646 1710 aa28.8■■■□□ 2.2
BRD3-204ENST00000433041 AQRO60306 1485 aaKnown RBP eCLIP28.8■■■□□ 2.2
BRD3-204ENST00000433041 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
BRD3-204ENST00000433041 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
BRD3-204ENST00000433041 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
BRD3-204ENST00000433041 RAD54L2Q9Y4B4 1467 aa28.77■■■□□ 2.2
BRD3-204ENST00000433041 CUX1P39880 1505 aa28.74■■■□□ 2.19
BRD3-204ENST00000433041 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
BRD3-204ENST00000433041 ARHGEF11O15085 1522 aa28.69■■■□□ 2.18
BRD3-204ENST00000433041 SOGA1O94964 1423 aa28.67■■■□□ 2.18
BRD3-204ENST00000433041 WDR97A6NE52 1622 aa28.64■■■□□ 2.18
BRD3-204ENST00000433041 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
BRD3-204ENST00000433041 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
BRD3-204ENST00000433041 SNAPC4Q5SXM2 1469 aa28.56■■■□□ 2.16
BRD3-204ENST00000433041 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
BRD3-204ENST00000433041 FBLN2P98095 1184 aa28.47■■■□□ 2.15
BRD3-204ENST00000433041 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
BRD3-204ENST00000433041 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
BRD3-204ENST00000433041 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
BRD3-204ENST00000433041 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
BRD3-204ENST00000433041 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
BRD3-204ENST00000433041 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
BRD3-204ENST00000433041 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
BRD3-204ENST00000433041 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
BRD3-204ENST00000433041 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
BRD3-204ENST00000433041 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
BRD3-204ENST00000433041 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
BRD3-204ENST00000433041 CYB5RLQ6IPT4 315 aa28.3■■■□□ 2.12
BRD3-204ENST00000433041 CHMP7Q8WUX9 453 aaPredicted RBP28.27■■■□□ 2.12
BRD3-204ENST00000433041 WRNQ14191 1432 aaPredicted RBP eCLIP28.22■■■□□ 2.11
BRD3-204ENST00000433041 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
BRD3-204ENST00000433041 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
BRD3-204ENST00000433041 CEP170Q5SW79 1584 aa28.08■■■□□ 2.09
BRD3-204ENST00000433041 ERCC6L2Q5T890 1561 aa28.03■■■□□ 2.08
BRD3-204ENST00000433041 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
BRD3-204ENST00000433041 NUP160Q12769 1436 aa28.02■■■□□ 2.08
BRD3-204ENST00000433041 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
BRD3-204ENST00000433041 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
BRD3-204ENST00000433041 TRHP20396 242 aaPredicted RBP27.92■■■□□ 2.06
BRD3-204ENST00000433041 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
BRD3-204ENST00000433041 PRG4Q92954 1404 aaPredicted RBP27.69■■■□□ 2.02
BRD3-204ENST00000433041 CUL7Q14999 1698 aa27.68■■■□□ 2.02
BRD3-204ENST00000433041 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms