RNA–Protein interactions for RNA: ENST00000432981.2

SRGAP3-AS3-201, SRGAP3 antisense RNA 3, humanhuman

TSL 2 BASIC

Gene SRGAP3-AS3, Length 1,223 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-AS3-201ENST00000432981 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
SRGAP3-AS3-201ENST00000432981 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
SRGAP3-AS3-201ENST00000432981 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
SRGAP3-AS3-201ENST00000432981 ABCC9O60706 1549 aa20.68■□□□□ 0.9
SRGAP3-AS3-201ENST00000432981 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
SRGAP3-AS3-201ENST00000432981 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
SRGAP3-AS3-201ENST00000432981 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
SRGAP3-AS3-201ENST00000432981 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
SRGAP3-AS3-201ENST00000432981 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
SRGAP3-AS3-201ENST00000432981 NACADO15069 1562 aa19.19■□□□□ 0.66
SRGAP3-AS3-201ENST00000432981 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
SRGAP3-AS3-201ENST00000432981 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
SRGAP3-AS3-201ENST00000432981 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
SRGAP3-AS3-201ENST00000432981 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
SRGAP3-AS3-201ENST00000432981 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
SRGAP3-AS3-201ENST00000432981 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
SRGAP3-AS3-201ENST00000432981 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
SRGAP3-AS3-201ENST00000432981 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
SRGAP3-AS3-201ENST00000432981 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
SRGAP3-AS3-201ENST00000432981 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.56
SRGAP3-AS3-201ENST00000432981 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
SRGAP3-AS3-201ENST00000432981 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
SRGAP3-AS3-201ENST00000432981 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
SRGAP3-AS3-201ENST00000432981 FOXD1Q16676 465 aa18.1■□□□□ 0.49
SRGAP3-AS3-201ENST00000432981 CUX2O14529 1486 aa17.88■□□□□ 0.45
SRGAP3-AS3-201ENST00000432981 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
SRGAP3-AS3-201ENST00000432981 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
SRGAP3-AS3-201ENST00000432981 NESP48681 1621 aa17.69■□□□□ 0.42
SRGAP3-AS3-201ENST00000432981 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
SRGAP3-AS3-201ENST00000432981 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
SRGAP3-AS3-201ENST00000432981 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
SRGAP3-AS3-201ENST00000432981 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
SRGAP3-AS3-201ENST00000432981 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
SRGAP3-AS3-201ENST00000432981 KIF21AQ7Z4S6 1674 aa17.5■□□□□ 0.39
SRGAP3-AS3-201ENST00000432981 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
SRGAP3-AS3-201ENST00000432981 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
SRGAP3-AS3-201ENST00000432981 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
SRGAP3-AS3-201ENST00000432981 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
SRGAP3-AS3-201ENST00000432981 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
SRGAP3-AS3-201ENST00000432981 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
SRGAP3-AS3-201ENST00000432981 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
SRGAP3-AS3-201ENST00000432981 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
SRGAP3-AS3-201ENST00000432981 WDR62O43379 1518 aa17.21■□□□□ 0.34
SRGAP3-AS3-201ENST00000432981 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
SRGAP3-AS3-201ENST00000432981 WIZO95785 1651 aa17.11■□□□□ 0.33
SRGAP3-AS3-201ENST00000432981 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
SRGAP3-AS3-201ENST00000432981 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
SRGAP3-AS3-201ENST00000432981 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
SRGAP3-AS3-201ENST00000432981 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
SRGAP3-AS3-201ENST00000432981 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
SRGAP3-AS3-201ENST00000432981 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
SRGAP3-AS3-201ENST00000432981 URB2Q14146 1524 aaKnown RBP16.95■□□□□ 0.3
SRGAP3-AS3-201ENST00000432981 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
SRGAP3-AS3-201ENST00000432981 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
SRGAP3-AS3-201ENST00000432981 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
SRGAP3-AS3-201ENST00000432981 CFTRP13569 1480 aa16.89■□□□□ 0.29
SRGAP3-AS3-201ENST00000432981 ADRA2BP18089 450 aa16.89■□□□□ 0.29
SRGAP3-AS3-201ENST00000432981 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
SRGAP3-AS3-201ENST00000432981 MSH5O43196 834 aa16.83■□□□□ 0.28
SRGAP3-AS3-201ENST00000432981 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
SRGAP3-AS3-201ENST00000432981 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
SRGAP3-AS3-201ENST00000432981 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
SRGAP3-AS3-201ENST00000432981 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
SRGAP3-AS3-201ENST00000432981 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
SRGAP3-AS3-201ENST00000432981 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
SRGAP3-AS3-201ENST00000432981 CHD1O14646 1710 aa16.72■□□□□ 0.27
SRGAP3-AS3-201ENST00000432981 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
SRGAP3-AS3-201ENST00000432981 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
SRGAP3-AS3-201ENST00000432981 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
SRGAP3-AS3-201ENST00000432981 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
SRGAP3-AS3-201ENST00000432981 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
SRGAP3-AS3-201ENST00000432981 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
SRGAP3-AS3-201ENST00000432981 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
SRGAP3-AS3-201ENST00000432981 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.24
SRGAP3-AS3-201ENST00000432981 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
SRGAP3-AS3-201ENST00000432981 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
SRGAP3-AS3-201ENST00000432981 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
SRGAP3-AS3-201ENST00000432981 FBLN2P98095 1184 aa16.45■□□□□ 0.22
SRGAP3-AS3-201ENST00000432981 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
SRGAP3-AS3-201ENST00000432981 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
SRGAP3-AS3-201ENST00000432981 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
SRGAP3-AS3-201ENST00000432981 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
SRGAP3-AS3-201ENST00000432981 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
SRGAP3-AS3-201ENST00000432981 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
SRGAP3-AS3-201ENST00000432981 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
SRGAP3-AS3-201ENST00000432981 SOGA1O94964 1423 aa16.3■□□□□ 0.2
SRGAP3-AS3-201ENST00000432981 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
SRGAP3-AS3-201ENST00000432981 CUX1P39880 1505 aa16.28■□□□□ 0.2
SRGAP3-AS3-201ENST00000432981 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
SRGAP3-AS3-201ENST00000432981 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
SRGAP3-AS3-201ENST00000432981 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
SRGAP3-AS3-201ENST00000432981 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
SRGAP3-AS3-201ENST00000432981 ERCC6L2Q5T890 1561 aa16.22■□□□□ 0.19
SRGAP3-AS3-201ENST00000432981 CHMP7Q8WUX9 453 aaPredicted RBP16.21■□□□□ 0.19
SRGAP3-AS3-201ENST00000432981 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
SRGAP3-AS3-201ENST00000432981 KIF13AQ9H1H9 1805 aa16.11■□□□□ 0.17
SRGAP3-AS3-201ENST00000432981 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
SRGAP3-AS3-201ENST00000432981 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
SRGAP3-AS3-201ENST00000432981 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
SRGAP3-AS3-201ENST00000432981 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms