RNA–Protein interactions for RNA: ENST00000432911.5

MDH1B-202, Transcript of malate dehydrogenase 1B, humanhuman

TSL 1 (best)

Gene MDH1B, Length 1,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1B-202ENST00000432911 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
MDH1B-202ENST00000432911 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
MDH1B-202ENST00000432911 ABCC9O60706 1549 aa15.52■□□□□ 0.07
MDH1B-202ENST00000432911 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
MDH1B-202ENST00000432911 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
MDH1B-202ENST00000432911 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
MDH1B-202ENST00000432911 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
MDH1B-202ENST00000432911 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
MDH1B-202ENST00000432911 NACADO15069 1562 aa14.28□□□□□ -0.12
MDH1B-202ENST00000432911 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
MDH1B-202ENST00000432911 BICRAQ9NZM4 1560 aa14.21□□□□□ -0.14
MDH1B-202ENST00000432911 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
MDH1B-202ENST00000432911 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
MDH1B-202ENST00000432911 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
MDH1B-202ENST00000432911 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
MDH1B-202ENST00000432911 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
MDH1B-202ENST00000432911 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
MDH1B-202ENST00000432911 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
MDH1B-202ENST00000432911 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
MDH1B-202ENST00000432911 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
MDH1B-202ENST00000432911 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
MDH1B-202ENST00000432911 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
MDH1B-202ENST00000432911 CUX2O14529 1486 aa13.54□□□□□ -0.24
MDH1B-202ENST00000432911 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
MDH1B-202ENST00000432911 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
MDH1B-202ENST00000432911 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
MDH1B-202ENST00000432911 TRIM41Q8WV44 630 aa13.28□□□□□ -0.28
MDH1B-202ENST00000432911 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
MDH1B-202ENST00000432911 NESP48681 1621 aa13.24□□□□□ -0.29
MDH1B-202ENST00000432911 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
MDH1B-202ENST00000432911 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
MDH1B-202ENST00000432911 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
MDH1B-202ENST00000432911 SMARCA2P51531 1590 aa13□□□□□ -0.33
MDH1B-202ENST00000432911 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.34
MDH1B-202ENST00000432911 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
MDH1B-202ENST00000432911 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
MDH1B-202ENST00000432911 BAZ1BQ9UIG0 1483 aaKnown RBP12.92□□□□□ -0.34
MDH1B-202ENST00000432911 PDS5BQ9NTI5 1447 aa12.91□□□□□ -0.34
MDH1B-202ENST00000432911 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
MDH1B-202ENST00000432911 PEG3Q9GZU2 1588 aa12.88□□□□□ -0.35
MDH1B-202ENST00000432911 WDR62O43379 1518 aa12.85□□□□□ -0.35
MDH1B-202ENST00000432911 MRC2Q9UBG0 1479 aa12.84□□□□□ -0.35
MDH1B-202ENST00000432911 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.36
MDH1B-202ENST00000432911 CADPSQ9ULU8 1353 aa12.83□□□□□ -0.36
MDH1B-202ENST00000432911 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
MDH1B-202ENST00000432911 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
MDH1B-202ENST00000432911 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
MDH1B-202ENST00000432911 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
MDH1B-202ENST00000432911 FOXD1Q16676 465 aa12.7□□□□□ -0.38
MDH1B-202ENST00000432911 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
MDH1B-202ENST00000432911 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
MDH1B-202ENST00000432911 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
MDH1B-202ENST00000432911 CYB5RLQ6IPT4 315 aa12.63□□□□□ -0.39
MDH1B-202ENST00000432911 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
MDH1B-202ENST00000432911 CFTRP13569 1480 aa12.59□□□□□ -0.39
MDH1B-202ENST00000432911 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
MDH1B-202ENST00000432911 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
MDH1B-202ENST00000432911 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
MDH1B-202ENST00000432911 WIZO95785 1651 aa12.52□□□□□ -0.41
MDH1B-202ENST00000432911 IFT140Q96RY7 1462 aa12.46□□□□□ -0.41
MDH1B-202ENST00000432911 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
MDH1B-202ENST00000432911 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.43
MDH1B-202ENST00000432911 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
MDH1B-202ENST00000432911 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
MDH1B-202ENST00000432911 MSH5O43196 834 aa12.36□□□□□ -0.43
MDH1B-202ENST00000432911 CHD1O14646 1710 aa12.35□□□□□ -0.43
MDH1B-202ENST00000432911 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
MDH1B-202ENST00000432911 FBLN2P98095 1184 aa12.31□□□□□ -0.44
MDH1B-202ENST00000432911 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
MDH1B-202ENST00000432911 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
MDH1B-202ENST00000432911 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
MDH1B-202ENST00000432911 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
MDH1B-202ENST00000432911 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
MDH1B-202ENST00000432911 DNMBPQ6XZF7 1577 aa12.23□□□□□ -0.45
MDH1B-202ENST00000432911 TDRD9Q8NDG6 1382 aaKnown RBP12.23□□□□□ -0.45
MDH1B-202ENST00000432911 POLA1P09884 1462 aaPredicted RBP12.22□□□□□ -0.45
MDH1B-202ENST00000432911 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.46
MDH1B-202ENST00000432911 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
MDH1B-202ENST00000432911 SNAPC4Q5SXM2 1469 aa12.17□□□□□ -0.46
MDH1B-202ENST00000432911 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
MDH1B-202ENST00000432911 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
MDH1B-202ENST00000432911 SOGA1O94964 1423 aa12.14□□□□□ -0.47
MDH1B-202ENST00000432911 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
MDH1B-202ENST00000432911 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
MDH1B-202ENST00000432911 KDM4FA0A1W2PPD8 638 aa12.1□□□□□ -0.47
MDH1B-202ENST00000432911 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
MDH1B-202ENST00000432911 SYNJ2O15056 1496 aa12.09□□□□□ -0.47
MDH1B-202ENST00000432911 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
MDH1B-202ENST00000432911 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
MDH1B-202ENST00000432911 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
MDH1B-202ENST00000432911 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
MDH1B-202ENST00000432911 CUX1P39880 1505 aa11.99□□□□□ -0.49
MDH1B-202ENST00000432911 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
MDH1B-202ENST00000432911 CEP170Q5SW79 1584 aa11.97□□□□□ -0.49
MDH1B-202ENST00000432911 NUP160Q12769 1436 aa11.95□□□□□ -0.5
MDH1B-202ENST00000432911 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
MDH1B-202ENST00000432911 GRIN2AQ12879 1464 aa11.92□□□□□ -0.5
MDH1B-202ENST00000432911 FAM69CQ0P6D2 419 aa11.92□□□□□ -0.5
MDH1B-202ENST00000432911 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
MDH1B-202ENST00000432911 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms