RNA–Protein interactions for RNA: ENST00000432387.5

COPS7B-211, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-211ENST00000432387 NISCHQ9Y2I1 1504 aa45.41■■■■■ 4.86
COPS7B-211ENST00000432387 CCDC180Q9P1Z9 1646 aa40.25■■■■■ 4.03
COPS7B-211ENST00000432387 ABCC9O60706 1549 aa39.4■■■■□ 3.9
COPS7B-211ENST00000432387 DCAF8L2P0C7V8 631 aa37.94■■■■□ 3.66
COPS7B-211ENST00000432387 NACADO15069 1562 aa37.93■■■■□ 3.66
COPS7B-211ENST00000432387 RB1CC1Q8TDY2 1594 aa37.92■■■■□ 3.66
COPS7B-211ENST00000432387 ZCCHC6Q5VYS8 1495 aaKnown RBP37.79■■■■□ 3.64
COPS7B-211ENST00000432387 MYO15BQ96JP2 1530 aa37.77■■■■□ 3.64
COPS7B-211ENST00000432387 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
COPS7B-211ENST00000432387 UNC13AQ9UPW8 1703 aa37■■■■□ 3.51
COPS7B-211ENST00000432387 PABPN1Q86U42 306 aaKnown RBP eCLIP36.9■■■■□ 3.5
COPS7B-211ENST00000432387 BICRAQ9NZM4 1560 aa36.79■■■■□ 3.48
COPS7B-211ENST00000432387 SCRIBQ14160 1630 aa36.69■■■■□ 3.46
COPS7B-211ENST00000432387 SHROOM4Q9ULL8 1493 aa36.42■■■■□ 3.42
COPS7B-211ENST00000432387 DNAJC5BQ9UF47 199 aa36.29■■■■□ 3.4
COPS7B-211ENST00000432387 EIF4G1Q04637 1599 aaKnown RBP35.8■■■■□ 3.32
COPS7B-211ENST00000432387 CC2D2AQ9P2K1 1620 aa35.63■■■■□ 3.29
COPS7B-211ENST00000432387 CECR2Q9BXF3 1484 aa35.42■■■■□ 3.26
COPS7B-211ENST00000432387 BAZ1AQ9NRL2 1556 aaPredicted RBP35.16■■■■□ 3.22
COPS7B-211ENST00000432387 SMARCA4P51532 1647 aa35.15■■■■□ 3.22
COPS7B-211ENST00000432387 NCAPD3P42695 1498 aa35.06■■■■□ 3.2
COPS7B-211ENST00000432387 ATAD2BQ9ULI0 1458 aa35.04■■■■□ 3.2
COPS7B-211ENST00000432387 MROH2BQ7Z745 1585 aa34.96■■■■□ 3.19
COPS7B-211ENST00000432387 SMARCA2P51531 1590 aa34.95■■■■□ 3.18
COPS7B-211ENST00000432387 PEG3Q9GZU2 1588 aa34.88■■■■□ 3.17
COPS7B-211ENST00000432387 HMGXB3Q12766 1538 aa34.79■■■■□ 3.16
COPS7B-211ENST00000432387 BAZ1BQ9UIG0 1483 aaKnown RBP34.68■■■■□ 3.14
COPS7B-211ENST00000432387 RSF1Q96T23 1441 aaPredicted RBP34.63■■■■□ 3.13
COPS7B-211ENST00000432387 WIZO95785 1651 aa34.55■■■■□ 3.12
COPS7B-211ENST00000432387 TOP2AP11388 1531 aaKnown RBP34.19■■■■□ 3.06
COPS7B-211ENST00000432387 NESP48681 1621 aa34.11■■■■□ 3.05
COPS7B-211ENST00000432387 LAMC3Q9Y6N6 1575 aa34.04■■■■□ 3.04
COPS7B-211ENST00000432387 CADPSQ9ULU8 1353 aa34.04■■■■□ 3.04
COPS7B-211ENST00000432387 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
COPS7B-211ENST00000432387 CCDC88BA6NC98 1476 aa33.87■■■■□ 3.01
COPS7B-211ENST00000432387 PDS5BQ9NTI5 1447 aa33.87■■■■□ 3.01
COPS7B-211ENST00000432387 CFTRP13569 1480 aa33.82■■■■□ 3
COPS7B-211ENST00000432387 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
COPS7B-211ENST00000432387 KIF21AQ7Z4S6 1674 aa33.63■■■□□ 2.97
COPS7B-211ENST00000432387 CUX2O14529 1486 aa33.63■■■□□ 2.97
COPS7B-211ENST00000432387 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.97
COPS7B-211ENST00000432387 THOC2Q8NI27 1593 aaKnown RBP33.53■■■□□ 2.96
COPS7B-211ENST00000432387 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
COPS7B-211ENST00000432387 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
COPS7B-211ENST00000432387 PRDM2Q13029 1718 aa33.39■■■□□ 2.94
COPS7B-211ENST00000432387 WDR62O43379 1518 aa33.33■■■□□ 2.93
COPS7B-211ENST00000432387 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
COPS7B-211ENST00000432387 ABCC8Q09428 1581 aa33.09■■■□□ 2.89
COPS7B-211ENST00000432387 TOPBP1Q92547 1522 aa33.04■■■□□ 2.88
COPS7B-211ENST00000432387 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
COPS7B-211ENST00000432387 IFT140Q96RY7 1462 aa32.84■■■□□ 2.85
COPS7B-211ENST00000432387 CUX1P39880 1505 aa32.78■■■□□ 2.84
COPS7B-211ENST00000432387 POLA1P09884 1462 aaPredicted RBP32.75■■■□□ 2.83
COPS7B-211ENST00000432387 DNAJC5Q9H3Z4 198 aa32.69■■■□□ 2.82
COPS7B-211ENST00000432387 SOGA1O94964 1423 aa32.68■■■□□ 2.82
COPS7B-211ENST00000432387 ZNF608Q9ULD9 1512 aaPredicted RBP32.67■■■□□ 2.82
COPS7B-211ENST00000432387 FGD5Q6ZNL6 1462 aa32.66■■■□□ 2.82
COPS7B-211ENST00000432387 TARBP1Q13395 1621 aaKnown RBP32.66■■■□□ 2.82
COPS7B-211ENST00000432387 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
COPS7B-211ENST00000432387 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
COPS7B-211ENST00000432387 AQRO60306 1485 aaKnown RBP eCLIP32.52■■■□□ 2.8
COPS7B-211ENST00000432387 TOP2BQ02880 1626 aa32.51■■■□□ 2.79
COPS7B-211ENST00000432387 TDRD9Q8NDG6 1382 aaKnown RBP32.48■■■□□ 2.79
COPS7B-211ENST00000432387 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
COPS7B-211ENST00000432387 SYNJ1O43426 1573 aa32.46■■■□□ 2.79
COPS7B-211ENST00000432387 EIF4G3O43432 1585 aaKnown RBP32.45■■■□□ 2.79
COPS7B-211ENST00000432387 WDR97A6NE52 1622 aa32.4■■■□□ 2.78
COPS7B-211ENST00000432387 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
COPS7B-211ENST00000432387 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
COPS7B-211ENST00000432387 GAPVD1Q14C86 1478 aa32.26■■■□□ 2.75
COPS7B-211ENST00000432387 GRIN2BQ13224 1484 aa32.25■■■□□ 2.75
COPS7B-211ENST00000432387 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
COPS7B-211ENST00000432387 SNAPC4Q5SXM2 1469 aa32.16■■■□□ 2.74
COPS7B-211ENST00000432387 MAGI1Q96QZ7 1491 aaPredicted RBP32.16■■■□□ 2.74
COPS7B-211ENST00000432387 FBLN2P98095 1184 aa32.12■■■□□ 2.73
COPS7B-211ENST00000432387 CHMP7Q8WUX9 453 aaPredicted RBP32.08■■■□□ 2.73
COPS7B-211ENST00000432387 PBRM1Q86U86 1689 aa32.07■■■□□ 2.72
COPS7B-211ENST00000432387 SYNJ2O15056 1496 aa32.03■■■□□ 2.72
COPS7B-211ENST00000432387 CHD1O14646 1710 aa32.02■■■□□ 2.72
COPS7B-211ENST00000432387 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
COPS7B-211ENST00000432387 KIF27Q86VH2 1401 aa31.94■■■□□ 2.7
COPS7B-211ENST00000432387 FHAD1B1AJZ9 1412 aa31.92■■■□□ 2.7
COPS7B-211ENST00000432387 TRIM41Q8WV44 630 aa31.91■■■□□ 2.7
COPS7B-211ENST00000432387 IGF1RP08069 1367 aa31.9■■■□□ 2.7
COPS7B-211ENST00000432387 ADAMTS12P58397 1594 aa31.85■■■□□ 2.69
COPS7B-211ENST00000432387 GRIN2AQ12879 1464 aa31.82■■■□□ 2.68
COPS7B-211ENST00000432387 CLASP1Q7Z460 1538 aa31.76■■■□□ 2.68
COPS7B-211ENST00000432387 NUP160Q12769 1436 aa31.72■■■□□ 2.67
COPS7B-211ENST00000432387 ARHGEF11O15085 1522 aa31.69■■■□□ 2.66
COPS7B-211ENST00000432387 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
COPS7B-211ENST00000432387 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
COPS7B-211ENST00000432387 RIMBP3CA6NJZ7 1639 aa31.65■■■□□ 2.66
COPS7B-211ENST00000432387 RIMBP3BA6NNM3 1639 aa31.65■■■□□ 2.66
COPS7B-211ENST00000432387 RIMBP3Q9UFD9 1639 aa31.65■■■□□ 2.66
COPS7B-211ENST00000432387 CUL7Q14999 1698 aa31.64■■■□□ 2.65
COPS7B-211ENST00000432387 CEP170Q5SW79 1584 aa31.63■■■□□ 2.65
COPS7B-211ENST00000432387 CHIC1Q5VXU3 224 aa31.59■■■□□ 2.65
COPS7B-211ENST00000432387 CYB5RLQ6IPT4 315 aa31.49■■■□□ 2.63
COPS7B-211ENST00000432387 JPH4Q96JJ6 628 aa31.49■■■□□ 2.63
COPS7B-211ENST00000432387 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms